RNA–Protein interactions for RNA: ENST00000472027.1

SYN3-211, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-211ENST00000472027 SHROOM2Q13796 1616 aa15.45■□□□□ 0.06
SYN3-211ENST00000472027 PRG4Q92954 1404 aaPredicted RBP15.44■□□□□ 0.06
SYN3-211ENST00000472027 KIAA0586Q9BVV6 1533 aa15.44■□□□□ 0.06
SYN3-211ENST00000472027 RAPGEF2Q9Y4G8 1499 aa15.42■□□□□ 0.06
SYN3-211ENST00000472027 CHIC1Q5VXU3 224 aa15.39■□□□□ 0.05
SYN3-211ENST00000472027 CSRNP3Q8WYN3 585 aa15.37■□□□□ 0.05
SYN3-211ENST00000472027 PRXQ9BXM0 1461 aa15.33■□□□□ 0.05
SYN3-211ENST00000472027 TRHP20396 242 aaPredicted RBP15.33■□□□□ 0.04
SYN3-211ENST00000472027 FAM9AQ8IZU1 332 aaPredicted RBP15.31■□□□□ 0.04
SYN3-211ENST00000472027 IQGAP2Q13576 1575 aa15.3■□□□□ 0.04
SYN3-211ENST00000472027 EEA1Q15075 1411 aa15.3■□□□□ 0.04
SYN3-211ENST00000472027 CARMIL2Q6F5E8 1435 aa15.29■□□□□ 0.04
SYN3-211ENST00000472027 AEBP2Q6ZN18 517 aaPredicted RBP15.28■□□□□ 0.04
SYN3-211ENST00000472027 TTBK1Q5TCY1 1321 aaPredicted RBP15.27■□□□□ 0.04
SYN3-211ENST00000472027 PTPRGP23470 1445 aa15.26■□□□□ 0.03
SYN3-211ENST00000472027 TNIKQ9UKE5 1360 aa15.25■□□□□ 0.03
SYN3-211ENST00000472027 DISP1Q96F81 1524 aa15.23■□□□□ 0.03
SYN3-211ENST00000472027 UGGT2Q9NYU1 1516 aa15.23■□□□□ 0.03
SYN3-211ENST00000472027 NPM1P06748 294 aaKnown RBP eCLIP15.23■□□□□ 0.03
SYN3-211ENST00000472027 CTTNBP2Q8WZ74 1663 aa15.19■□□□□ 0.02
SYN3-211ENST00000472027 ADCY10Q96PN6 1610 aa15.17■□□□□ 0.02
SYN3-211ENST00000472027 KIAA0556O60303 1618 aa15.16■□□□□ 0.02
SYN3-211ENST00000472027 GOLGA3Q08378 1498 aa15.15■□□□□ 0.02
SYN3-211ENST00000472027 UACAQ9BZF9 1416 aa15.14■□□□□ 0.01
SYN3-211ENST00000472027 P3H3Q8IVL6 736 aa15.13■□□□□ 0.01
SYN3-211ENST00000472027 EHMT2Q96KQ7 1210 aa15.13■□□□□ 0.01
SYN3-211ENST00000472027 KIF21BO75037 1637 aa15.11■□□□□ 0.01
SYN3-211ENST00000472027 RANGAP1P46060 587 aaPredicted RBP15.11■□□□□ 0.01
SYN3-211ENST00000472027 UHRF1BP1LA0JNW5 1464 aa15.11■□□□□ 0.01
SYN3-211ENST00000472027 UBTFP17480 764 aaKnown RBP15.1■□□□□ 0.01
SYN3-211ENST00000472027 MAPKBP1O60336 1514 aa15.09■□□□□ 0.01
SYN3-211ENST00000472027 ABCC2Q92887 1545 aa15.09■□□□□ 0.01
SYN3-211ENST00000472027 FAM69CQ0P6D2 419 aa15.09■□□□□ 0.01
SYN3-211ENST00000472027 ABCC10Q5T3U5 1492 aa15.06■□□□□ 0
SYN3-211ENST00000472027 PLB1Q6P1J6 1458 aa15.06■□□□□ 0
SYN3-211ENST00000472027 KDM5BQ9UGL1 1544 aa15.03■□□□□ -0
SYN3-211ENST00000472027 SAMD9Q5K651 1589 aa15.02■□□□□ -0
SYN3-211ENST00000472027 ASXL2Q76L83 1435 aa15.02■□□□□ -0
SYN3-211ENST00000472027 ABCA8O94911 1581 aa15.01□□□□□ -0.01
SYN3-211ENST00000472027 KIF13AQ9H1H9 1805 aa15.01□□□□□ -0.01
SYN3-211ENST00000472027 DIP2BQ9P265 1576 aa14.99□□□□□ -0.01
SYN3-211ENST00000472027 FHOD3Q2V2M9 1422 aa14.99□□□□□ -0.01
SYN3-211ENST00000472027 ZCCHC11Q5TAX3 1644 aaKnown RBP14.97□□□□□ -0.01
SYN3-211ENST00000472027 ARID3CA6NKF2 412 aa14.97□□□□□ -0.01
SYN3-211ENST00000472027 EFCAB5A4FU69 1503 aa14.95□□□□□ -0.02
SYN3-211ENST00000472027 ATP10BO94823 1461 aa14.94□□□□□ -0.02
SYN3-211ENST00000472027 EPRSP07814 1512 aaKnown RBP14.92□□□□□ -0.02
SYN3-211ENST00000472027 KCNH8Q96L42 1107 aa14.92□□□□□ -0.02
SYN3-211ENST00000472027 GLI2P10070 1586 aa14.91□□□□□ -0.02
SYN3-211ENST00000472027 WDR7Q9Y4E6 1490 aa14.91□□□□□ -0.02
SYN3-211ENST00000472027 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.91□□□□□ -0.02
SYN3-211ENST00000472027 HNRNPUL2Q1KMD3 747 aaKnown RBP14.91□□□□□ -0.02
SYN3-211ENST00000472027 RAPGEF6Q8TEU7 1601 aa14.91□□□□□ -0.02
SYN3-211ENST00000472027 ARHGAP35Q9NRY4 1499 aa14.9□□□□□ -0.02
SYN3-211ENST00000472027 NUP153P49790 1475 aaKnown RBP14.88□□□□□ -0.03
SYN3-211ENST00000472027 TSPOAP1O95153 1857 aa14.86□□□□□ -0.03
SYN3-211ENST00000472027 FMN1Q68DA7 1419 aa14.85□□□□□ -0.03
SYN3-211ENST00000472027 ATP1B4Q9UN42 357 aaPredicted RBP14.85□□□□□ -0.03
SYN3-211ENST00000472027 PLEKHD1A6NEE1 506 aa14.84□□□□□ -0.03
SYN3-211ENST00000472027 MAP3K4Q9Y6R4 1608 aa14.82□□□□□ -0.04
SYN3-211ENST00000472027 CD109Q6YHK3 1445 aa14.82□□□□□ -0.04
SYN3-211ENST00000472027 PPRC1Q5VV67 1664 aaKnown RBP14.81□□□□□ -0.04
SYN3-211ENST00000472027 LOC105371045A0A1W2PR82 267 aa14.79□□□□□ -0.04
SYN3-211ENST00000472027 CLIP1P30622 1438 aa14.79□□□□□ -0.04
SYN3-211ENST00000472027 TEX14Q8IWB6 1497 aa14.79□□□□□ -0.04
SYN3-211ENST00000472027 KDM6BO15054 1643 aa14.78□□□□□ -0.04
SYN3-211ENST00000472027 MAGI3Q5TCQ9 1506 aa14.77□□□□□ -0.04
SYN3-211ENST00000472027 CFAP43Q8NDM7 1665 aa14.76□□□□□ -0.05
SYN3-211ENST00000472027 CDK13Q14004 1512 aaKnown RBP14.76□□□□□ -0.05
SYN3-211ENST00000472027 CDK11AQ9UQ88 783 aaPredicted RBP14.75□□□□□ -0.05
SYN3-211ENST00000472027 COL17A1Q9UMD9 1497 aaPredicted RBP14.75□□□□□ -0.05
SYN3-211ENST00000472027 HECW1Q76N89 1606 aa14.74□□□□□ -0.05
SYN3-211ENST00000472027 CASKIN1Q8WXD9 1431 aa14.73□□□□□ -0.05
SYN3-211ENST00000472027 ABCA9Q8IUA7 1624 aa14.73□□□□□ -0.05
SYN3-211ENST00000472027 CEP162Q5TB80 1403 aa14.7□□□□□ -0.06
SYN3-211ENST00000472027 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.68□□□□□ -0.06
SYN3-211ENST00000472027 PCF11O94913 1555 aaKnown RBP14.68□□□□□ -0.06
SYN3-211ENST00000472027 PHLDB1Q86UU1 1377 aa14.67□□□□□ -0.06
SYN3-211ENST00000472027 TROQ12816 1431 aaPredicted RBP14.66□□□□□ -0.06
SYN3-211ENST00000472027 CCDC18Q5T9S5 1454 aa14.65□□□□□ -0.06
SYN3-211ENST00000472027 FYCO1Q9BQS8 1478 aa14.65□□□□□ -0.06
SYN3-211ENST00000472027 LRRIQ1Q96JM4 1722 aa14.65□□□□□ -0.06
SYN3-211ENST00000472027 NEO1Q92859 1461 aa14.64□□□□□ -0.07
SYN3-211ENST00000472027 ARAP3Q8WWN8 1544 aa14.64□□□□□ -0.07
SYN3-211ENST00000472027 PLCH2O75038 1416 aa14.62□□□□□ -0.07
SYN3-211ENST00000472027 RAPGEF3O95398 923 aa14.62□□□□□ -0.07
SYN3-211ENST00000472027 TTC37Q6PGP7 1564 aa14.62□□□□□ -0.07
SYN3-211ENST00000472027 AKNAQ7Z591 1439 aa14.61□□□□□ -0.07
SYN3-211ENST00000472027 FANCAO15360 1455 aa14.61□□□□□ -0.07
SYN3-211ENST00000472027 KIF14Q15058 1648 aa14.59□□□□□ -0.07
SYN3-211ENST00000472027 EFCAB2Q5VUJ9 269 aa14.59□□□□□ -0.07
SYN3-211ENST00000472027 KDM4FA0A1W2PPD8 638 aa14.57□□□□□ -0.08
SYN3-211ENST00000472027 DENND4BO75064 1496 aaPredicted RBP14.56□□□□□ -0.08
SYN3-211ENST00000472027 CFAP74Q9C0B2 1584 aa14.55□□□□□ -0.08
SYN3-211ENST00000472027 SCAPERQ9BY12 1400 aa14.54□□□□□ -0.08
SYN3-211ENST00000472027 VPS8Q8N3P4 1428 aa14.53□□□□□ -0.08
SYN3-211ENST00000472027 MTUS2Q5JR59 1369 aa14.53□□□□□ -0.08
SYN3-211ENST00000472027 MYO5CQ9NQX4 1742 aa14.52□□□□□ -0.08
SYN3-211ENST00000472027 ADGRL1O94910 1474 aa14.52□□□□□ -0.08
SYN3-211ENST00000472027 ARHGAP5Q13017 1502 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms