RNA–Protein interactions for RNA: ENST00000471988.1

MDH1B-206, Transcript of malate dehydrogenase 1B, humanhuman

TSL 2

Gene MDH1B, Length 722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1B-206ENST00000471988 ARAP1Q96P48 1450 aa18.47■□□□□ 0.55
MDH1B-206ENST00000471988 CYB5RLQ6IPT4 315 aa18.45■□□□□ 0.54
MDH1B-206ENST00000471988 SHROOM2Q13796 1616 aa18.44■□□□□ 0.54
MDH1B-206ENST00000471988 KIAA0586Q9BVV6 1533 aa18.4■□□□□ 0.54
MDH1B-206ENST00000471988 JPH4Q96JJ6 628 aa18.4■□□□□ 0.54
MDH1B-206ENST00000471988 RAPGEF2Q9Y4G8 1499 aa18.39■□□□□ 0.53
MDH1B-206ENST00000471988 ERCC6L2Q5T890 1561 aa18.38■□□□□ 0.53
MDH1B-206ENST00000471988 PRG4Q92954 1404 aaPredicted RBP18.35■□□□□ 0.53
MDH1B-206ENST00000471988 PRXQ9BXM0 1461 aa18.33■□□□□ 0.53
MDH1B-206ENST00000471988 EEA1Q15075 1411 aa18.31■□□□□ 0.52
MDH1B-206ENST00000471988 CSRNP3Q8WYN3 585 aa18.3■□□□□ 0.52
MDH1B-206ENST00000471988 IQGAP2Q13576 1575 aa18.25■□□□□ 0.51
MDH1B-206ENST00000471988 UGGT2Q9NYU1 1516 aa18.19■□□□□ 0.5
MDH1B-206ENST00000471988 CARMIL2Q6F5E8 1435 aa18.19■□□□□ 0.5
MDH1B-206ENST00000471988 FAM9AQ8IZU1 332 aaPredicted RBP18.17■□□□□ 0.5
MDH1B-206ENST00000471988 CTTNBP2Q8WZ74 1663 aa18.17■□□□□ 0.5
MDH1B-206ENST00000471988 DISP1Q96F81 1524 aa18.17■□□□□ 0.5
MDH1B-206ENST00000471988 TNIKQ9UKE5 1360 aa18.15■□□□□ 0.5
MDH1B-206ENST00000471988 PTPRGP23470 1445 aa18.13■□□□□ 0.49
MDH1B-206ENST00000471988 KIF21BO75037 1637 aa18.1■□□□□ 0.49
MDH1B-206ENST00000471988 KIAA0556O60303 1618 aa18.09■□□□□ 0.49
MDH1B-206ENST00000471988 GOLGA3Q08378 1498 aa18.07■□□□□ 0.48
MDH1B-206ENST00000471988 ADCY10Q96PN6 1610 aa18.06■□□□□ 0.48
MDH1B-206ENST00000471988 TRHP20396 242 aaPredicted RBP18.06■□□□□ 0.48
MDH1B-206ENST00000471988 TTBK1Q5TCY1 1321 aaPredicted RBP18.03■□□□□ 0.48
MDH1B-206ENST00000471988 NPM1P06748 294 aaKnown RBP eCLIP18.02■□□□□ 0.48
MDH1B-206ENST00000471988 UHRF1BP1LA0JNW5 1464 aa18.01■□□□□ 0.47
MDH1B-206ENST00000471988 UACAQ9BZF9 1416 aa18.01■□□□□ 0.47
MDH1B-206ENST00000471988 MAPKBP1O60336 1514 aa17.98■□□□□ 0.47
MDH1B-206ENST00000471988 ABCC2Q92887 1545 aa17.98■□□□□ 0.47
MDH1B-206ENST00000471988 SAMD9Q5K651 1589 aa17.97■□□□□ 0.47
MDH1B-206ENST00000471988 UBTFP17480 764 aaKnown RBP17.93■□□□□ 0.46
MDH1B-206ENST00000471988 P3H3Q8IVL6 736 aa17.93■□□□□ 0.46
MDH1B-206ENST00000471988 PLB1Q6P1J6 1458 aa17.93■□□□□ 0.46
MDH1B-206ENST00000471988 KDM5BQ9UGL1 1544 aa17.93■□□□□ 0.46
MDH1B-206ENST00000471988 ABCA8O94911 1581 aa17.92■□□□□ 0.46
MDH1B-206ENST00000471988 ABCC10Q5T3U5 1492 aa17.9■□□□□ 0.46
MDH1B-206ENST00000471988 EHMT2Q96KQ7 1210 aa17.9■□□□□ 0.46
MDH1B-206ENST00000471988 EFCAB5A4FU69 1503 aa17.88■□□□□ 0.45
MDH1B-206ENST00000471988 KIF13AQ9H1H9 1805 aa17.87■□□□□ 0.45
MDH1B-206ENST00000471988 RANGAP1P46060 587 aaPredicted RBP17.87■□□□□ 0.45
MDH1B-206ENST00000471988 ASXL2Q76L83 1435 aa17.86■□□□□ 0.45
MDH1B-206ENST00000471988 FAM69CQ0P6D2 419 aa17.85■□□□□ 0.45
MDH1B-206ENST00000471988 ZCCHC11Q5TAX3 1644 aaKnown RBP17.85■□□□□ 0.45
MDH1B-206ENST00000471988 DIP2BQ9P265 1576 aa17.85■□□□□ 0.45
MDH1B-206ENST00000471988 FHOD3Q2V2M9 1422 aa17.84■□□□□ 0.45
MDH1B-206ENST00000471988 FOXD1Q16676 465 aa17.82■□□□□ 0.44
MDH1B-206ENST00000471988 ARHGAP35Q9NRY4 1499 aa17.81■□□□□ 0.44
MDH1B-206ENST00000471988 RAPGEF6Q8TEU7 1601 aa17.79■□□□□ 0.44
MDH1B-206ENST00000471988 ATP10BO94823 1461 aa17.78■□□□□ 0.44
MDH1B-206ENST00000471988 GLI2P10070 1586 aa17.78■□□□□ 0.44
MDH1B-206ENST00000471988 EPRSP07814 1512 aaKnown RBP17.76■□□□□ 0.43
MDH1B-206ENST00000471988 WDR7Q9Y4E6 1490 aa17.75■□□□□ 0.43
MDH1B-206ENST00000471988 NUP153P49790 1475 aaKnown RBP17.75■□□□□ 0.43
MDH1B-206ENST00000471988 FMN1Q68DA7 1419 aa17.72■□□□□ 0.43
MDH1B-206ENST00000471988 ARID3CA6NKF2 412 aa17.71■□□□□ 0.43
MDH1B-206ENST00000471988 MAP3K4Q9Y6R4 1608 aa17.67■□□□□ 0.42
MDH1B-206ENST00000471988 CLIP1P30622 1438 aa17.66■□□□□ 0.42
MDH1B-206ENST00000471988 KCNH8Q96L42 1107 aa17.66■□□□□ 0.42
MDH1B-206ENST00000471988 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.65■□□□□ 0.42
MDH1B-206ENST00000471988 HNRNPUL2Q1KMD3 747 aaKnown RBP17.65■□□□□ 0.42
MDH1B-206ENST00000471988 TSPOAP1O95153 1857 aa17.65■□□□□ 0.42
MDH1B-206ENST00000471988 PPRC1Q5VV67 1664 aaKnown RBP17.64■□□□□ 0.42
MDH1B-206ENST00000471988 HECW1Q76N89 1606 aa17.61■□□□□ 0.41
MDH1B-206ENST00000471988 LOC105371045A0A1W2PR82 267 aa17.61■□□□□ 0.41
MDH1B-206ENST00000471988 PLEKHD1A6NEE1 506 aa17.61■□□□□ 0.41
MDH1B-206ENST00000471988 CD109Q6YHK3 1445 aa17.61■□□□□ 0.41
MDH1B-206ENST00000471988 CFAP43Q8NDM7 1665 aa17.61■□□□□ 0.41
MDH1B-206ENST00000471988 CDK13Q14004 1512 aaKnown RBP17.59■□□□□ 0.41
MDH1B-206ENST00000471988 MAGI3Q5TCQ9 1506 aa17.59■□□□□ 0.41
MDH1B-206ENST00000471988 TEX14Q8IWB6 1497 aa17.59■□□□□ 0.41
MDH1B-206ENST00000471988 CASKIN1Q8WXD9 1431 aa17.59■□□□□ 0.41
MDH1B-206ENST00000471988 ATP1B4Q9UN42 357 aaPredicted RBP17.58■□□□□ 0.4
MDH1B-206ENST00000471988 ABCA9Q8IUA7 1624 aa17.58■□□□□ 0.4
MDH1B-206ENST00000471988 CEP162Q5TB80 1403 aa17.57■□□□□ 0.4
MDH1B-206ENST00000471988 KDM6BO15054 1643 aa17.56■□□□□ 0.4
MDH1B-206ENST00000471988 PCF11O94913 1555 aaKnown RBP17.55■□□□□ 0.4
MDH1B-206ENST00000471988 FYCO1Q9BQS8 1478 aa17.53■□□□□ 0.4
MDH1B-206ENST00000471988 CDK11AQ9UQ88 783 aaPredicted RBP17.53■□□□□ 0.4
MDH1B-206ENST00000471988 LRRIQ1Q96JM4 1722 aa17.52■□□□□ 0.4
MDH1B-206ENST00000471988 COL17A1Q9UMD9 1497 aaPredicted RBP17.52■□□□□ 0.4
MDH1B-206ENST00000471988 CCDC18Q5T9S5 1454 aa17.5■□□□□ 0.39
MDH1B-206ENST00000471988 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.5■□□□□ 0.39
MDH1B-206ENST00000471988 TROQ12816 1431 aaPredicted RBP17.48■□□□□ 0.39
MDH1B-206ENST00000471988 PHLDB1Q86UU1 1377 aa17.47■□□□□ 0.39
MDH1B-206ENST00000471988 TTC37Q6PGP7 1564 aa17.45■□□□□ 0.38
MDH1B-206ENST00000471988 NEO1Q92859 1461 aa17.44■□□□□ 0.38
MDH1B-206ENST00000471988 ARAP3Q8WWN8 1544 aa17.44■□□□□ 0.38
MDH1B-206ENST00000471988 PLCH2O75038 1416 aa17.41■□□□□ 0.38
MDH1B-206ENST00000471988 KIF14Q15058 1648 aa17.41■□□□□ 0.38
MDH1B-206ENST00000471988 FANCAO15360 1455 aa17.38■□□□□ 0.37
MDH1B-206ENST00000471988 VPS8Q8N3P4 1428 aa17.38■□□□□ 0.37
MDH1B-206ENST00000471988 AKNAQ7Z591 1439 aa17.37■□□□□ 0.37
MDH1B-206ENST00000471988 CFAP74Q9C0B2 1584 aa17.36■□□□□ 0.37
MDH1B-206ENST00000471988 MYO5CQ9NQX4 1742 aa17.35■□□□□ 0.37
MDH1B-206ENST00000471988 EFCAB2Q5VUJ9 269 aa17.34■□□□□ 0.37
MDH1B-206ENST00000471988 RAPGEF3O95398 923 aa17.33■□□□□ 0.36
MDH1B-206ENST00000471988 DENND4BO75064 1496 aaPredicted RBP17.31■□□□□ 0.36
MDH1B-206ENST00000471988 MTUS2Q5JR59 1369 aa17.31■□□□□ 0.36
MDH1B-206ENST00000471988 FRMPD1Q5SYB0 1578 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms