RNA–Protein interactions for RNA: ENST00000471894.1

PUM1-208, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 3

Gene PUM1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-208ENST00000471894 RANGAP1P46060 587 aaPredicted RBP16.92■□□□□ 0.3
PUM1-208ENST00000471894 CTTNBP2Q8WZ74 1663 aa16.89■□□□□ 0.29
PUM1-208ENST00000471894 NUP160Q12769 1436 aa16.87■□□□□ 0.29
PUM1-208ENST00000471894 CEP170Q5SW79 1584 aa16.87■□□□□ 0.29
PUM1-208ENST00000471894 KIAA0586Q9BVV6 1533 aa16.86■□□□□ 0.29
PUM1-208ENST00000471894 OSCARQ8IYS5 282 aa16.84■□□□□ 0.29
PUM1-208ENST00000471894 CEP162Q5TB80 1403 aa16.84■□□□□ 0.29
PUM1-208ENST00000471894 IQGAP2Q13576 1575 aa16.83■□□□□ 0.28
PUM1-208ENST00000471894 CLIP1P30622 1438 aa16.81■□□□□ 0.28
PUM1-208ENST00000471894 JPH4Q96JJ6 628 aa16.81■□□□□ 0.28
PUM1-208ENST00000471894 P3H3Q8IVL6 736 aa16.77■□□□□ 0.28
PUM1-208ENST00000471894 CLASP1Q7Z460 1538 aa16.74■□□□□ 0.27
PUM1-208ENST00000471894 UGGT2Q9NYU1 1516 aa16.74■□□□□ 0.27
PUM1-208ENST00000471894 ARHGAP35Q9NRY4 1499 aa16.73■□□□□ 0.27
PUM1-208ENST00000471894 EFCAB5A4FU69 1503 aa16.71■□□□□ 0.27
PUM1-208ENST00000471894 CARMIL2Q6F5E8 1435 aa16.7■□□□□ 0.26
PUM1-208ENST00000471894 PRG4Q92954 1404 aaPredicted RBP16.69■□□□□ 0.26
PUM1-208ENST00000471894 SAMD9Q5K651 1589 aa16.68■□□□□ 0.26
PUM1-208ENST00000471894 SHROOM2Q13796 1616 aa16.67■□□□□ 0.26
PUM1-208ENST00000471894 DISP1Q96F81 1524 aa16.67■□□□□ 0.26
PUM1-208ENST00000471894 FHOD3Q2V2M9 1422 aa16.66■□□□□ 0.26
PUM1-208ENST00000471894 ARAP1Q96P48 1450 aa16.66■□□□□ 0.26
PUM1-208ENST00000471894 TTBK1Q5TCY1 1321 aaPredicted RBP16.65■□□□□ 0.26
PUM1-208ENST00000471894 KIAA0556O60303 1618 aa16.64■□□□□ 0.25
PUM1-208ENST00000471894 VPS8Q8N3P4 1428 aa16.6■□□□□ 0.25
PUM1-208ENST00000471894 FMN1Q68DA7 1419 aa16.59■□□□□ 0.25
PUM1-208ENST00000471894 ERCC6L2Q5T890 1561 aa16.59■□□□□ 0.25
PUM1-208ENST00000471894 PTPRGP23470 1445 aa16.57■□□□□ 0.24
PUM1-208ENST00000471894 ATP1B4Q9UN42 357 aaPredicted RBP16.57■□□□□ 0.24
PUM1-208ENST00000471894 PHF23Q9BUL5 403 aaPredicted RBP16.55■□□□□ 0.24
PUM1-208ENST00000471894 APLP2Q06481 763 aa16.52■□□□□ 0.24
PUM1-208ENST00000471894 CASKIN1Q8WXD9 1431 aa16.51■□□□□ 0.23
PUM1-208ENST00000471894 ARHGEF11O15085 1522 aa16.49■□□□□ 0.23
PUM1-208ENST00000471894 PCF11O94913 1555 aaKnown RBP16.48■□□□□ 0.23
PUM1-208ENST00000471894 PLB1Q6P1J6 1458 aa16.48■□□□□ 0.23
PUM1-208ENST00000471894 FYCO1Q9BQS8 1478 aa16.48■□□□□ 0.23
PUM1-208ENST00000471894 RAPGEF6Q8TEU7 1601 aa16.46■□□□□ 0.23
PUM1-208ENST00000471894 UACAQ9BZF9 1416 aa16.45■□□□□ 0.22
PUM1-208ENST00000471894 ABCA8O94911 1581 aa16.44■□□□□ 0.22
PUM1-208ENST00000471894 ARID3CA6NKF2 412 aa16.44■□□□□ 0.22
PUM1-208ENST00000471894 RIMBP3CA6NJZ7 1639 aa16.44■□□□□ 0.22
PUM1-208ENST00000471894 RIMBP3BA6NNM3 1639 aa16.44■□□□□ 0.22
PUM1-208ENST00000471894 RIMBP3Q9UFD9 1639 aa16.44■□□□□ 0.22
PUM1-208ENST00000471894 HECW1Q76N89 1606 aa16.42■□□□□ 0.22
PUM1-208ENST00000471894 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.42■□□□□ 0.22
PUM1-208ENST00000471894 HNRNPUL2Q1KMD3 747 aaKnown RBP16.42■□□□□ 0.22
PUM1-208ENST00000471894 CYB5RLQ6IPT4 315 aa16.41■□□□□ 0.22
PUM1-208ENST00000471894 PPARGC1BQ86YN6 1023 aaKnown RBP16.41■□□□□ 0.22
PUM1-208ENST00000471894 NUP153P49790 1475 aaKnown RBP16.4■□□□□ 0.22
PUM1-208ENST00000471894 CCDC18Q5T9S5 1454 aa16.38■□□□□ 0.21
PUM1-208ENST00000471894 EPRSP07814 1512 aaKnown RBP16.38■□□□□ 0.21
PUM1-208ENST00000471894 ABCC2Q92887 1545 aa16.38■□□□□ 0.21
PUM1-208ENST00000471894 UHRF1BP1LA0JNW5 1464 aa16.37■□□□□ 0.21
PUM1-208ENST00000471894 LRRIQ1Q96JM4 1722 aa16.37■□□□□ 0.21
PUM1-208ENST00000471894 MAP3K1Q13233 1512 aa16.37■□□□□ 0.21
PUM1-208ENST00000471894 TIAM1Q13009 1591 aa16.36■□□□□ 0.21
PUM1-208ENST00000471894 KANK4Q5T7N3 995 aaPredicted RBP16.36■□□□□ 0.21
PUM1-208ENST00000471894 ATP10BO94823 1461 aa16.35■□□□□ 0.21
PUM1-208ENST00000471894 CDK11AQ9UQ88 783 aaPredicted RBP16.35■□□□□ 0.21
PUM1-208ENST00000471894 CDK13Q14004 1512 aaKnown RBP16.35■□□□□ 0.21
PUM1-208ENST00000471894 NPM1P06748 294 aaKnown RBP eCLIP16.34■□□□□ 0.21
PUM1-208ENST00000471894 DNAJC5Q9H3Z4 198 aa16.34■□□□□ 0.21
PUM1-208ENST00000471894 ADCY10Q96PN6 1610 aa16.33■□□□□ 0.2
PUM1-208ENST00000471894 CFAP43Q8NDM7 1665 aa16.33■□□□□ 0.2
PUM1-208ENST00000471894 MTUS2Q5JR59 1369 aa16.31■□□□□ 0.2
PUM1-208ENST00000471894 PLEKHD1A6NEE1 506 aa16.31■□□□□ 0.2
PUM1-208ENST00000471894 LRRC9Q6ZRR7 1453 aa16.3■□□□□ 0.2
PUM1-208ENST00000471894 KDM5BQ9UGL1 1544 aa16.29■□□□□ 0.2
PUM1-208ENST00000471894 SENP3Q9H4L4 574 aaPredicted RBP16.29■□□□□ 0.2
PUM1-208ENST00000471894 ZCCHC11Q5TAX3 1644 aaKnown RBP16.27■□□□□ 0.2
PUM1-208ENST00000471894 MAGI3Q5TCQ9 1506 aa16.24■□□□□ 0.19
PUM1-208ENST00000471894 TROQ12816 1431 aaPredicted RBP16.23■□□□□ 0.19
PUM1-208ENST00000471894 EHBP1L1Q8N3D4 1523 aa16.23■□□□□ 0.19
PUM1-208ENST00000471894 KCNH8Q96L42 1107 aa16.22■□□□□ 0.19
PUM1-208ENST00000471894 SUPT6HQ7KZ85 1726 aaKnown RBP16.19■□□□□ 0.18
PUM1-208ENST00000471894 ASXL2Q76L83 1435 aa16.19■□□□□ 0.18
PUM1-208ENST00000471894 NCOA2Q15596 1464 aa16.16■□□□□ 0.18
PUM1-208ENST00000471894 WDR7Q9Y4E6 1490 aa16.16■□□□□ 0.18
PUM1-208ENST00000471894 KIF14Q15058 1648 aa16.14■□□□□ 0.17
PUM1-208ENST00000471894 TRIM26Q12899 539 aaPredicted RBP16.13■□□□□ 0.17
PUM1-208ENST00000471894 PHLDB1Q86UU1 1377 aa16.13■□□□□ 0.17
PUM1-208ENST00000471894 CCNB3Q8WWL7 1395 aa16.13■□□□□ 0.17
PUM1-208ENST00000471894 MAPKBP1O60336 1514 aa16.12■□□□□ 0.17
PUM1-208ENST00000471894 ABCC10Q5T3U5 1492 aa16.09■□□□□ 0.17
PUM1-208ENST00000471894 MYOM3Q5VTT5 1437 aa16.08■□□□□ 0.16
PUM1-208ENST00000471894 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.08■□□□□ 0.16
PUM1-208ENST00000471894 CFDP1Q9UEE9 299 aaPredicted RBP16.07■□□□□ 0.16
PUM1-208ENST00000471894 GPATCH8Q9UKJ3 1502 aaKnown RBP16.05■□□□□ 0.16
PUM1-208ENST00000471894 FAM50AQ14320 339 aaKnown RBP16.05■□□□□ 0.16
PUM1-208ENST00000471894 TTC37Q6PGP7 1564 aa16.04■□□□□ 0.16
PUM1-208ENST00000471894 FGD6Q6ZV73 1430 aa16.04■□□□□ 0.16
PUM1-208ENST00000471894 FAM69CQ0P6D2 419 aa16.04■□□□□ 0.16
PUM1-208ENST00000471894 MIA2Q96PC5 1412 aa16.03■□□□□ 0.16
PUM1-208ENST00000471894 RRBP1Q9P2E9 1410 aaKnown RBP16.03■□□□□ 0.16
PUM1-208ENST00000471894 CDC42BPAQ5VT25 1732 aa16.03■□□□□ 0.16
PUM1-208ENST00000471894 ITSN2Q9NZM3 1697 aa16.03■□□□□ 0.16
PUM1-208ENST00000471894 ZNF777Q9ULD5 760 aaPredicted RBP16.03■□□□□ 0.16
PUM1-208ENST00000471894 ABCA9Q8IUA7 1624 aa16.02■□□□□ 0.16
PUM1-208ENST00000471894 PCGF6Q9BYE7 350 aa16.02■□□□□ 0.16
PUM1-208ENST00000471894 MYO5CQ9NQX4 1742 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms