RNA–Protein interactions for RNA: ENST00000471862.1

COL4A3-205, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 5

Gene COL4A3, Length 755 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-205ENST00000471862 PRG4Q92954 1404 aaPredicted RBP19.93■□□□□ 0.78
COL4A3-205ENST00000471862 KIAA0586Q9BVV6 1533 aa19.92■□□□□ 0.78
COL4A3-205ENST00000471862 TRHP20396 242 aaPredicted RBP19.91■□□□□ 0.78
COL4A3-205ENST00000471862 CARMIL1Q5VZK9 1371 aa19.91■□□□□ 0.78
COL4A3-205ENST00000471862 IQGAP2Q13576 1575 aa19.76■□□□□ 0.75
COL4A3-205ENST00000471862 RAPGEF2Q9Y4G8 1499 aa19.76■□□□□ 0.75
COL4A3-205ENST00000471862 ADCY10Q96PN6 1610 aa19.73■□□□□ 0.75
COL4A3-205ENST00000471862 KIF13AQ9H1H9 1805 aa19.69■□□□□ 0.74
COL4A3-205ENST00000471862 MAPKBP1O60336 1514 aa19.67■□□□□ 0.74
COL4A3-205ENST00000471862 CARMIL2Q6F5E8 1435 aa19.67■□□□□ 0.74
COL4A3-205ENST00000471862 DISP1Q96F81 1524 aa19.66■□□□□ 0.74
COL4A3-205ENST00000471862 UGGT2Q9NYU1 1516 aa19.66■□□□□ 0.74
COL4A3-205ENST00000471862 TNIKQ9UKE5 1360 aa19.66■□□□□ 0.74
COL4A3-205ENST00000471862 PTPRGP23470 1445 aa19.65■□□□□ 0.74
COL4A3-205ENST00000471862 PRXQ9BXM0 1461 aa19.65■□□□□ 0.74
COL4A3-205ENST00000471862 CTTNBP2Q8WZ74 1663 aa19.63■□□□□ 0.73
COL4A3-205ENST00000471862 ABCC10Q5T3U5 1492 aa19.6■□□□□ 0.73
COL4A3-205ENST00000471862 KIAA0556O60303 1618 aa19.59■□□□□ 0.73
COL4A3-205ENST00000471862 NPM1P06748 294 aaKnown RBP eCLIP19.59■□□□□ 0.73
COL4A3-205ENST00000471862 DIP2BQ9P265 1576 aa19.58■□□□□ 0.73
COL4A3-205ENST00000471862 UHRF1BP1LA0JNW5 1464 aa19.56■□□□□ 0.72
COL4A3-205ENST00000471862 ABCC2Q92887 1545 aa19.56■□□□□ 0.72
COL4A3-205ENST00000471862 UACAQ9BZF9 1416 aa19.53■□□□□ 0.72
COL4A3-205ENST00000471862 TTBK1Q5TCY1 1321 aaPredicted RBP19.52■□□□□ 0.72
COL4A3-205ENST00000471862 FAM69CQ0P6D2 419 aa19.51■□□□□ 0.71
COL4A3-205ENST00000471862 EEA1Q15075 1411 aa19.5■□□□□ 0.71
COL4A3-205ENST00000471862 CSRNP3Q8WYN3 585 aa19.49■□□□□ 0.71
COL4A3-205ENST00000471862 GOLGA3Q08378 1498 aa19.48■□□□□ 0.71
COL4A3-205ENST00000471862 KDM5BQ9UGL1 1544 aa19.47■□□□□ 0.71
COL4A3-205ENST00000471862 ASXL2Q76L83 1435 aa19.44■□□□□ 0.7
COL4A3-205ENST00000471862 PLB1Q6P1J6 1458 aa19.44■□□□□ 0.7
COL4A3-205ENST00000471862 ZCCHC11Q5TAX3 1644 aaKnown RBP19.43■□□□□ 0.7
COL4A3-205ENST00000471862 ABCA8O94911 1581 aa19.41■□□□□ 0.7
COL4A3-205ENST00000471862 GLI2P10070 1586 aa19.41■□□□□ 0.7
COL4A3-205ENST00000471862 TSPOAP1O95153 1857 aa19.4■□□□□ 0.7
COL4A3-205ENST00000471862 SAMD9Q5K651 1589 aa19.37■□□□□ 0.69
COL4A3-205ENST00000471862 PPRC1Q5VV67 1664 aaKnown RBP19.36■□□□□ 0.69
COL4A3-205ENST00000471862 KIF21BO75037 1637 aa19.35■□□□□ 0.69
COL4A3-205ENST00000471862 EPRSP07814 1512 aaKnown RBP19.35■□□□□ 0.69
COL4A3-205ENST00000471862 CHIC1Q5VXU3 224 aa19.33■□□□□ 0.68
COL4A3-205ENST00000471862 KDM6BO15054 1643 aa19.33■□□□□ 0.68
COL4A3-205ENST00000471862 MAP3K4Q9Y6R4 1608 aa19.32■□□□□ 0.68
COL4A3-205ENST00000471862 WDR7Q9Y4E6 1490 aa19.3■□□□□ 0.68
COL4A3-205ENST00000471862 FAM9AQ8IZU1 332 aaPredicted RBP19.3■□□□□ 0.68
COL4A3-205ENST00000471862 P3H3Q8IVL6 736 aa19.27■□□□□ 0.68
COL4A3-205ENST00000471862 RAPGEF6Q8TEU7 1601 aa19.22■□□□□ 0.67
COL4A3-205ENST00000471862 ATP10BO94823 1461 aa19.22■□□□□ 0.67
COL4A3-205ENST00000471862 CFAP43Q8NDM7 1665 aa19.2■□□□□ 0.66
COL4A3-205ENST00000471862 TEX14Q8IWB6 1497 aa19.2■□□□□ 0.66
COL4A3-205ENST00000471862 EFCAB5A4FU69 1503 aa19.2■□□□□ 0.66
COL4A3-205ENST00000471862 FHOD3Q2V2M9 1422 aa19.19■□□□□ 0.66
COL4A3-205ENST00000471862 COL17A1Q9UMD9 1497 aaPredicted RBP19.17■□□□□ 0.66
COL4A3-205ENST00000471862 MAGI3Q5TCQ9 1506 aa19.16■□□□□ 0.66
COL4A3-205ENST00000471862 NUP153P49790 1475 aaKnown RBP19.16■□□□□ 0.66
COL4A3-205ENST00000471862 CD109Q6YHK3 1445 aa19.14■□□□□ 0.65
COL4A3-205ENST00000471862 ARID3CA6NKF2 412 aa19.13■□□□□ 0.65
COL4A3-205ENST00000471862 RANGAP1P46060 587 aaPredicted RBP19.13■□□□□ 0.65
COL4A3-205ENST00000471862 KCNH8Q96L42 1107 aa19.13■□□□□ 0.65
COL4A3-205ENST00000471862 AEBP2Q6ZN18 517 aaPredicted RBP19.12■□□□□ 0.65
COL4A3-205ENST00000471862 ABCA9Q8IUA7 1624 aa19.1■□□□□ 0.65
COL4A3-205ENST00000471862 UBTFP17480 764 aaKnown RBP19.07■□□□□ 0.64
COL4A3-205ENST00000471862 ARHGAP35Q9NRY4 1499 aa19.06■□□□□ 0.64
COL4A3-205ENST00000471862 EHMT2Q96KQ7 1210 aa19.05■□□□□ 0.64
COL4A3-205ENST00000471862 KDM4FA0A1W2PPD8 638 aa19.01■□□□□ 0.63
COL4A3-205ENST00000471862 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19■□□□□ 0.63
COL4A3-205ENST00000471862 HNRNPUL2Q1KMD3 747 aaKnown RBP19■□□□□ 0.63
COL4A3-205ENST00000471862 ARAP3Q8WWN8 1544 aa19■□□□□ 0.63
COL4A3-205ENST00000471862 FMN1Q68DA7 1419 aa19■□□□□ 0.63
COL4A3-205ENST00000471862 CDK13Q14004 1512 aaKnown RBP18.98■□□□□ 0.63
COL4A3-205ENST00000471862 HECW1Q76N89 1606 aa18.96■□□□□ 0.63
COL4A3-205ENST00000471862 PHLDB1Q86UU1 1377 aa18.96■□□□□ 0.63
COL4A3-205ENST00000471862 PLEKHD1A6NEE1 506 aa18.96■□□□□ 0.63
COL4A3-205ENST00000471862 NEO1Q92859 1461 aa18.96■□□□□ 0.63
COL4A3-205ENST00000471862 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.94■□□□□ 0.62
COL4A3-205ENST00000471862 ADGRL1O94910 1474 aa18.92■□□□□ 0.62
COL4A3-205ENST00000471862 TTC37Q6PGP7 1564 aa18.92■□□□□ 0.62
COL4A3-205ENST00000471862 LRRIQ1Q96JM4 1722 aa18.9■□□□□ 0.62
COL4A3-205ENST00000471862 FRMPD1Q5SYB0 1578 aa18.89■□□□□ 0.62
COL4A3-205ENST00000471862 CFAP74Q9C0B2 1584 aa18.86■□□□□ 0.61
COL4A3-205ENST00000471862 PCF11O94913 1555 aaKnown RBP18.85■□□□□ 0.61
COL4A3-205ENST00000471862 FANCAO15360 1455 aa18.84■□□□□ 0.61
COL4A3-205ENST00000471862 AKNAQ7Z591 1439 aa18.83■□□□□ 0.61
COL4A3-205ENST00000471862 RICTORQ6R327 1708 aa18.83■□□□□ 0.61
COL4A3-205ENST00000471862 RAPGEF3O95398 923 aa18.83■□□□□ 0.6
COL4A3-205ENST00000471862 CASKIN1Q8WXD9 1431 aa18.83■□□□□ 0.6
COL4A3-205ENST00000471862 ATP1B4Q9UN42 357 aaPredicted RBP18.82■□□□□ 0.6
COL4A3-205ENST00000471862 TROQ12816 1431 aaPredicted RBP18.82■□□□□ 0.6
COL4A3-205ENST00000471862 KIF14Q15058 1648 aa18.82■□□□□ 0.6
COL4A3-205ENST00000471862 PLCH2O75038 1416 aa18.81■□□□□ 0.6
COL4A3-205ENST00000471862 DENND4BO75064 1496 aaPredicted RBP18.8■□□□□ 0.6
COL4A3-205ENST00000471862 CLIP1P30622 1438 aa18.8■□□□□ 0.6
COL4A3-205ENST00000471862 MYO5CQ9NQX4 1742 aa18.8■□□□□ 0.6
COL4A3-205ENST00000471862 CDK11AQ9UQ88 783 aaPredicted RBP18.79■□□□□ 0.6
COL4A3-205ENST00000471862 CCDC18Q5T9S5 1454 aa18.78■□□□□ 0.6
COL4A3-205ENST00000471862 FYCO1Q9BQS8 1478 aa18.77■□□□□ 0.6
COL4A3-205ENST00000471862 ZMYM4Q5VZL5 1548 aa18.76■□□□□ 0.59
COL4A3-205ENST00000471862 ARHGEF40Q8TER5 1519 aa18.76■□□□□ 0.59
COL4A3-205ENST00000471862 ADAMTSL3P82987 1691 aa18.72■□□□□ 0.59
COL4A3-205ENST00000471862 POGZQ7Z3K3 1410 aa18.71■□□□□ 0.59
COL4A3-205ENST00000471862 SCAPERQ9BY12 1400 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms