RNA–Protein interactions for RNA: ENST00000471812.5

GGPS1-204, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2

Gene GGPS1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-204ENST00000471812 SCAF1Q9H7N4 1312 aaKnown RBP16.5■□□□□ 0.23
GGPS1-204ENST00000471812 DMRT2Q9Y5R5 561 aa16.5■□□□□ 0.23
GGPS1-204ENST00000471812 ARAP1Q96P48 1450 aa16.48■□□□□ 0.23
GGPS1-204ENST00000471812 CEP170Q5SW79 1584 aa16.48■□□□□ 0.23
GGPS1-204ENST00000471812 GRIN2AQ12879 1464 aa16.47■□□□□ 0.23
GGPS1-204ENST00000471812 ERICH3Q5RHP9 1530 aa16.45■□□□□ 0.22
GGPS1-204ENST00000471812 ERCC6L2Q5T890 1561 aa16.45■□□□□ 0.22
GGPS1-204ENST00000471812 FHAD1B1AJZ9 1412 aa16.42■□□□□ 0.22
GGPS1-204ENST00000471812 CYB5RLQ6IPT4 315 aa16.41■□□□□ 0.22
GGPS1-204ENST00000471812 NUP160Q12769 1436 aa16.4■□□□□ 0.22
GGPS1-204ENST00000471812 RUSC2Q8N2Y8 1516 aa16.38■□□□□ 0.21
GGPS1-204ENST00000471812 IGF1RP08069 1367 aa16.37■□□□□ 0.21
GGPS1-204ENST00000471812 KIF27Q86VH2 1401 aa16.34■□□□□ 0.21
GGPS1-204ENST00000471812 SHROOM2Q13796 1616 aa16.34■□□□□ 0.21
GGPS1-204ENST00000471812 CUL7Q14999 1698 aa16.29■□□□□ 0.2
GGPS1-204ENST00000471812 CARMIL1Q5VZK9 1371 aa16.24■□□□□ 0.19
GGPS1-204ENST00000471812 PRG4Q92954 1404 aaPredicted RBP16.21■□□□□ 0.19
GGPS1-204ENST00000471812 NCBP3Q53F19 620 aaKnown RBP16.2■□□□□ 0.18
GGPS1-204ENST00000471812 JPH4Q96JJ6 628 aa16.19■□□□□ 0.18
GGPS1-204ENST00000471812 EHMT2Q96KQ7 1210 aa16.19■□□□□ 0.18
GGPS1-204ENST00000471812 KIAA0586Q9BVV6 1533 aa16.17■□□□□ 0.18
GGPS1-204ENST00000471812 NPM3O75607 178 aaKnown RBP16.11■□□□□ 0.17
GGPS1-204ENST00000471812 RAPGEF2Q9Y4G8 1499 aa16.1■□□□□ 0.17
GGPS1-204ENST00000471812 IQGAP2Q13576 1575 aa16.09■□□□□ 0.17
GGPS1-204ENST00000471812 TRHP20396 242 aaPredicted RBP16.08■□□□□ 0.16
GGPS1-204ENST00000471812 ADCY10Q96PN6 1610 aa16.07■□□□□ 0.16
GGPS1-204ENST00000471812 PRXQ9BXM0 1461 aa16.06■□□□□ 0.16
GGPS1-204ENST00000471812 CTTNBP2Q8WZ74 1663 aa16.05■□□□□ 0.16
GGPS1-204ENST00000471812 SLC4A1APQ9BWU0 796 aaKnown RBP16.05■□□□□ 0.16
GGPS1-204ENST00000471812 DISP1Q96F81 1524 aa16.04■□□□□ 0.16
GGPS1-204ENST00000471812 TTBK1Q5TCY1 1321 aaPredicted RBP16.04■□□□□ 0.16
GGPS1-204ENST00000471812 FAM9AQ8IZU1 332 aaPredicted RBP16.01■□□□□ 0.15
GGPS1-204ENST00000471812 KIF13AQ9H1H9 1805 aa16.01■□□□□ 0.15
GGPS1-204ENST00000471812 UGGT2Q9NYU1 1516 aa16■□□□□ 0.15
GGPS1-204ENST00000471812 KIAA0556O60303 1618 aa15.98■□□□□ 0.15
GGPS1-204ENST00000471812 CNKSR2Q8WXI2 1034 aa15.98■□□□□ 0.15
GGPS1-204ENST00000471812 PTPRGP23470 1445 aa15.95■□□□□ 0.14
GGPS1-204ENST00000471812 CSRNP3Q8WYN3 585 aa15.95■□□□□ 0.14
GGPS1-204ENST00000471812 TNIKQ9UKE5 1360 aa15.94■□□□□ 0.14
GGPS1-204ENST00000471812 CARMIL2Q6F5E8 1435 aa15.92■□□□□ 0.14
GGPS1-204ENST00000471812 DCAF8L1A6NGE4 600 aa15.9■□□□□ 0.14
GGPS1-204ENST00000471812 DIP2BQ9P265 1576 aa15.88■□□□□ 0.13
GGPS1-204ENST00000471812 MAPKBP1O60336 1514 aa15.88■□□□□ 0.13
GGPS1-204ENST00000471812 ABCC2Q92887 1545 aa15.88■□□□□ 0.13
GGPS1-204ENST00000471812 PLB1Q6P1J6 1458 aa15.86■□□□□ 0.13
GGPS1-204ENST00000471812 EEA1Q15075 1411 aa15.85■□□□□ 0.13
GGPS1-204ENST00000471812 P3H3Q8IVL6 736 aa15.85■□□□□ 0.13
GGPS1-204ENST00000471812 KIF21BO75037 1637 aa15.85■□□□□ 0.13
GGPS1-204ENST00000471812 UACAQ9BZF9 1416 aa15.85■□□□□ 0.13
GGPS1-204ENST00000471812 HOXD11P31277 338 aaPredicted RBP15.84■□□□□ 0.13
GGPS1-204ENST00000471812 TSPOAP1O95153 1857 aa15.84■□□□□ 0.13
GGPS1-204ENST00000471812 UHRF1BP1LA0JNW5 1464 aa15.84■□□□□ 0.13
GGPS1-204ENST00000471812 ABCC10Q5T3U5 1492 aa15.84■□□□□ 0.13
GGPS1-204ENST00000471812 ZCCHC11Q5TAX3 1644 aaKnown RBP15.83■□□□□ 0.13
GGPS1-204ENST00000471812 SAMD9Q5K651 1589 aa15.83■□□□□ 0.12
GGPS1-204ENST00000471812 RANGAP1P46060 587 aaPredicted RBP15.82■□□□□ 0.12
GGPS1-204ENST00000471812 ABCA8O94911 1581 aa15.82■□□□□ 0.12
GGPS1-204ENST00000471812 NPM1P06748 294 aaKnown RBP eCLIP15.8■□□□□ 0.12
GGPS1-204ENST00000471812 FAM69CQ0P6D2 419 aa15.8■□□□□ 0.12
GGPS1-204ENST00000471812 KDM5BQ9UGL1 1544 aa15.79■□□□□ 0.12
GGPS1-204ENST00000471812 ASXL2Q76L83 1435 aa15.79■□□□□ 0.12
GGPS1-204ENST00000471812 GOLGA3Q08378 1498 aa15.78■□□□□ 0.12
GGPS1-204ENST00000471812 PPRC1Q5VV67 1664 aaKnown RBP15.77■□□□□ 0.12
GGPS1-204ENST00000471812 ARID3CA6NKF2 412 aa15.76■□□□□ 0.11
GGPS1-204ENST00000471812 FHOD3Q2V2M9 1422 aa15.76■□□□□ 0.11
GGPS1-204ENST00000471812 CACNB1Q02641 598 aaPredicted RBP15.75■□□□□ 0.11
GGPS1-204ENST00000471812 EPRSP07814 1512 aaKnown RBP15.71■□□□□ 0.11
GGPS1-204ENST00000471812 RNF216Q9NWF9 866 aaPredicted RBP15.7■□□□□ 0.1
GGPS1-204ENST00000471812 RAPGEF6Q8TEU7 1601 aa15.69■□□□□ 0.1
GGPS1-204ENST00000471812 GLI2P10070 1586 aa15.69■□□□□ 0.1
GGPS1-204ENST00000471812 ATP10BO94823 1461 aa15.68■□□□□ 0.1
GGPS1-204ENST00000471812 MAP3K4Q9Y6R4 1608 aa15.68■□□□□ 0.1
GGPS1-204ENST00000471812 WDR7Q9Y4E6 1490 aa15.66■□□□□ 0.1
GGPS1-204ENST00000471812 UBTFP17480 764 aaKnown RBP15.66■□□□□ 0.1
GGPS1-204ENST00000471812 NUP153P49790 1475 aaKnown RBP15.65■□□□□ 0.1
GGPS1-204ENST00000471812 ARHGAP35Q9NRY4 1499 aa15.65■□□□□ 0.1
GGPS1-204ENST00000471812 COL17A1Q9UMD9 1497 aaPredicted RBP15.63■□□□□ 0.09
GGPS1-204ENST00000471812 EFCAB5A4FU69 1503 aa15.63■□□□□ 0.09
GGPS1-204ENST00000471812 KDM6BO15054 1643 aa15.62■□□□□ 0.09
GGPS1-204ENST00000471812 KCNH8Q96L42 1107 aa15.61■□□□□ 0.09
GGPS1-204ENST00000471812 LRRIQ1Q96JM4 1722 aa15.6■□□□□ 0.09
GGPS1-204ENST00000471812 CDK13Q14004 1512 aaKnown RBP15.58■□□□□ 0.09
GGPS1-204ENST00000471812 ZBTB22O15209 634 aa15.58■□□□□ 0.08
GGPS1-204ENST00000471812 CFAP43Q8NDM7 1665 aa15.57■□□□□ 0.08
GGPS1-204ENST00000471812 RNF39Q9H2S5 420 aa15.54■□□□□ 0.08
GGPS1-204ENST00000471812 ABCA9Q8IUA7 1624 aa15.52■□□□□ 0.08
GGPS1-204ENST00000471812 CD109Q6YHK3 1445 aa15.51■□□□□ 0.07
GGPS1-204ENST00000471812 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.5■□□□□ 0.07
GGPS1-204ENST00000471812 HNRNPUL2Q1KMD3 747 aaKnown RBP15.5■□□□□ 0.07
GGPS1-204ENST00000471812 PCF11O94913 1555 aaKnown RBP15.49■□□□□ 0.07
GGPS1-204ENST00000471812 MAGI3Q5TCQ9 1506 aa15.49■□□□□ 0.07
GGPS1-204ENST00000471812 TTC37Q6PGP7 1564 aa15.49■□□□□ 0.07
GGPS1-204ENST00000471812 HECW1Q76N89 1606 aa15.47■□□□□ 0.07
GGPS1-204ENST00000471812 TEX14Q8IWB6 1497 aa15.46■□□□□ 0.07
GGPS1-204ENST00000471812 ATP1B4Q9UN42 357 aaPredicted RBP15.46■□□□□ 0.07
GGPS1-204ENST00000471812 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.46■□□□□ 0.07
GGPS1-204ENST00000471812 KIF14Q15058 1648 aa15.45■□□□□ 0.06
GGPS1-204ENST00000471812 FMN1Q68DA7 1419 aa15.44■□□□□ 0.06
GGPS1-204ENST00000471812 CLIP1P30622 1438 aa15.43■□□□□ 0.06
GGPS1-204ENST00000471812 LOC105371045A0A1W2PR82 267 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 202.4 ms