RNA–Protein interactions for RNA: ENST00000471704.1

COMMD1-207, Transcript of copper metabolism domain containing 1, humanhuman

TSL 1 (best)

Gene COMMD1, Length 604 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-207ENST00000471704 RUSC2Q8N2Y8 1516 aa32.74■■■□□ 2.83
COMMD1-207ENST00000471704 CUL7Q14999 1698 aa32.68■■■□□ 2.82
COMMD1-207ENST00000471704 KIAA0586Q9BVV6 1533 aa32.61■■■□□ 2.81
COMMD1-207ENST00000471704 CARMIL1Q5VZK9 1371 aa32.54■■■□□ 2.8
COMMD1-207ENST00000471704 KIF13AQ9H1H9 1805 aa32.41■■■□□ 2.78
COMMD1-207ENST00000471704 ADCY10Q96PN6 1610 aa32.38■■■□□ 2.77
COMMD1-207ENST00000471704 MAPKBP1O60336 1514 aa32.32■■■□□ 2.76
COMMD1-207ENST00000471704 NPM1P06748 294 aaKnown RBP eCLIP32.32■■■□□ 2.76
COMMD1-207ENST00000471704 IQGAP2Q13576 1575 aa32.29■■■□□ 2.76
COMMD1-207ENST00000471704 ABCC10Q5T3U5 1492 aa32.28■■■□□ 2.76
COMMD1-207ENST00000471704 PTPRGP23470 1445 aa32.26■■■□□ 2.76
COMMD1-207ENST00000471704 RAPGEF2Q9Y4G8 1499 aa32.25■■■□□ 2.75
COMMD1-207ENST00000471704 CARMIL2Q6F5E8 1435 aa32.25■■■□□ 2.75
COMMD1-207ENST00000471704 TNIKQ9UKE5 1360 aa32.22■■■□□ 2.75
COMMD1-207ENST00000471704 FAM69CQ0P6D2 419 aa32.21■■■□□ 2.75
COMMD1-207ENST00000471704 DIP2BQ9P265 1576 aa32.19■■■□□ 2.74
COMMD1-207ENST00000471704 DISP1Q96F81 1524 aa32.16■■■□□ 2.74
COMMD1-207ENST00000471704 UGGT2Q9NYU1 1516 aa32.13■■■□□ 2.73
COMMD1-207ENST00000471704 TTBK1Q5TCY1 1321 aaPredicted RBP32.1■■■□□ 2.73
COMMD1-207ENST00000471704 ABCC2Q92887 1545 aa32.09■■■□□ 2.73
COMMD1-207ENST00000471704 UHRF1BP1LA0JNW5 1464 aa32.07■■■□□ 2.72
COMMD1-207ENST00000471704 CTTNBP2Q8WZ74 1663 aa32.07■■■□□ 2.72
COMMD1-207ENST00000471704 UACAQ9BZF9 1416 aa32.03■■■□□ 2.72
COMMD1-207ENST00000471704 PRXQ9BXM0 1461 aa32.02■■■□□ 2.72
COMMD1-207ENST00000471704 KIAA0556O60303 1618 aa32■■■□□ 2.71
COMMD1-207ENST00000471704 ASXL2Q76L83 1435 aa31.95■■■□□ 2.71
COMMD1-207ENST00000471704 PLB1Q6P1J6 1458 aa31.95■■■□□ 2.7
COMMD1-207ENST00000471704 AEBP2Q6ZN18 517 aaPredicted RBP31.94■■■□□ 2.7
COMMD1-207ENST00000471704 TSPOAP1O95153 1857 aa31.94■■■□□ 2.7
COMMD1-207ENST00000471704 KDM5BQ9UGL1 1544 aa31.93■■■□□ 2.7
COMMD1-207ENST00000471704 GLI2P10070 1586 aa31.89■■■□□ 2.7
COMMD1-207ENST00000471704 KDM6BO15054 1643 aa31.84■■■□□ 2.69
COMMD1-207ENST00000471704 GOLGA3Q08378 1498 aa31.84■■■□□ 2.69
COMMD1-207ENST00000471704 ZCCHC11Q5TAX3 1644 aaKnown RBP31.82■■■□□ 2.69
COMMD1-207ENST00000471704 PPRC1Q5VV67 1664 aaKnown RBP31.8■■■□□ 2.68
COMMD1-207ENST00000471704 EPRSP07814 1512 aaKnown RBP31.78■■■□□ 2.68
COMMD1-207ENST00000471704 CSRNP3Q8WYN3 585 aa31.76■■■□□ 2.67
COMMD1-207ENST00000471704 EEA1Q15075 1411 aa31.74■■■□□ 2.67
COMMD1-207ENST00000471704 ABCA8O94911 1581 aa31.73■■■□□ 2.67
COMMD1-207ENST00000471704 MAP3K4Q9Y6R4 1608 aa31.71■■■□□ 2.67
COMMD1-207ENST00000471704 WDR7Q9Y4E6 1490 aa31.66■■■□□ 2.66
COMMD1-207ENST00000471704 CHIC1Q5VXU3 224 aa31.62■■■□□ 2.65
COMMD1-207ENST00000471704 SAMD9Q5K651 1589 aa31.6■■■□□ 2.65
COMMD1-207ENST00000471704 KIF21BO75037 1637 aa31.59■■■□□ 2.65
COMMD1-207ENST00000471704 FAM9AQ8IZU1 332 aaPredicted RBP31.58■■■□□ 2.65
COMMD1-207ENST00000471704 COL17A1Q9UMD9 1497 aaPredicted RBP31.58■■■□□ 2.65
COMMD1-207ENST00000471704 TEX14Q8IWB6 1497 aa31.57■■■□□ 2.64
COMMD1-207ENST00000471704 P3H3Q8IVL6 736 aa31.54■■■□□ 2.64
COMMD1-207ENST00000471704 KDM4FA0A1W2PPD8 638 aa31.52■■■□□ 2.64
COMMD1-207ENST00000471704 CFAP43Q8NDM7 1665 aa31.48■■■□□ 2.63
COMMD1-207ENST00000471704 ATP10BO94823 1461 aa31.47■■■□□ 2.63
COMMD1-207ENST00000471704 KCNH8Q96L42 1107 aa31.47■■■□□ 2.63
COMMD1-207ENST00000471704 CD109Q6YHK3 1445 aa31.46■■■□□ 2.63
COMMD1-207ENST00000471704 MAGI3Q5TCQ9 1506 aa31.45■■■□□ 2.63
COMMD1-207ENST00000471704 RAPGEF6Q8TEU7 1601 aa31.38■■■□□ 2.61
COMMD1-207ENST00000471704 ARID3CA6NKF2 412 aa31.38■■■□□ 2.61
COMMD1-207ENST00000471704 FHOD3Q2V2M9 1422 aa31.3■■■□□ 2.6
COMMD1-207ENST00000471704 NUP153P49790 1475 aaKnown RBP31.29■■■□□ 2.6
COMMD1-207ENST00000471704 RANGAP1P46060 587 aaPredicted RBP31.29■■■□□ 2.6
COMMD1-207ENST00000471704 EFCAB5A4FU69 1503 aa31.29■■■□□ 2.6
COMMD1-207ENST00000471704 ABCA9Q8IUA7 1624 aa31.27■■■□□ 2.6
COMMD1-207ENST00000471704 ADGRL1O94910 1474 aa31.26■■■□□ 2.59
COMMD1-207ENST00000471704 EHMT2Q96KQ7 1210 aa31.23■■■□□ 2.59
COMMD1-207ENST00000471704 ARAP3Q8WWN8 1544 aa31.23■■■□□ 2.59
COMMD1-207ENST00000471704 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.18■■■□□ 2.58
COMMD1-207ENST00000471704 HNRNPUL2Q1KMD3 747 aaKnown RBP31.18■■■□□ 2.58
COMMD1-207ENST00000471704 PHLDB1Q86UU1 1377 aa31.17■■■□□ 2.58
COMMD1-207ENST00000471704 UBTFP17480 764 aaKnown RBP31.12■■■□□ 2.57
COMMD1-207ENST00000471704 NEO1Q92859 1461 aa31.09■■■□□ 2.57
COMMD1-207ENST00000471704 ARHGAP35Q9NRY4 1499 aa31.09■■■□□ 2.57
COMMD1-207ENST00000471704 PLEKHD1A6NEE1 506 aa31.08■■■□□ 2.57
COMMD1-207ENST00000471704 RAPGEF3O95398 923 aa31■■■□□ 2.55
COMMD1-207ENST00000471704 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.98■■■□□ 2.55
COMMD1-207ENST00000471704 CDK13Q14004 1512 aaKnown RBP30.97■■■□□ 2.55
COMMD1-207ENST00000471704 FMN1Q68DA7 1419 aa30.96■■■□□ 2.55
COMMD1-207ENST00000471704 FRMPD1Q5SYB0 1578 aa30.95■■■□□ 2.54
COMMD1-207ENST00000471704 LRRIQ1Q96JM4 1722 aa30.94■■■□□ 2.54
COMMD1-207ENST00000471704 HECW1Q76N89 1606 aa30.93■■■□□ 2.54
COMMD1-207ENST00000471704 TTC37Q6PGP7 1564 aa30.92■■■□□ 2.54
COMMD1-207ENST00000471704 AKNAQ7Z591 1439 aa30.89■■■□□ 2.53
COMMD1-207ENST00000471704 FANCAO15360 1455 aa30.89■■■□□ 2.53
COMMD1-207ENST00000471704 CFAP74Q9C0B2 1584 aa30.87■■■□□ 2.53
COMMD1-207ENST00000471704 RICTORQ6R327 1708 aa30.85■■■□□ 2.53
COMMD1-207ENST00000471704 DENND4BO75064 1496 aaPredicted RBP30.85■■■□□ 2.53
COMMD1-207ENST00000471704 ATP1B4Q9UN42 357 aaPredicted RBP30.81■■■□□ 2.52
COMMD1-207ENST00000471704 ADAMTSL3P82987 1691 aa30.81■■■□□ 2.52
COMMD1-207ENST00000471704 PLCH2O75038 1416 aa30.8■■■□□ 2.52
COMMD1-207ENST00000471704 PCF11O94913 1555 aaKnown RBP30.79■■■□□ 2.52
COMMD1-207ENST00000471704 HECW2Q9P2P5 1572 aa30.79■■■□□ 2.52
COMMD1-207ENST00000471704 CDK11AQ9UQ88 783 aaPredicted RBP30.76■■■□□ 2.51
COMMD1-207ENST00000471704 ARHGEF40Q8TER5 1519 aa30.76■■■□□ 2.51
COMMD1-207ENST00000471704 ZMYM4Q5VZL5 1548 aa30.74■■■□□ 2.51
COMMD1-207ENST00000471704 BCORL1Q5H9F3 1711 aa30.73■■■□□ 2.51
COMMD1-207ENST00000471704 KIF14Q15058 1648 aa30.72■■■□□ 2.51
COMMD1-207ENST00000471704 TROQ12816 1431 aaPredicted RBP30.71■■■□□ 2.51
COMMD1-207ENST00000471704 MYO5CQ9NQX4 1742 aa30.7■■■□□ 2.5
COMMD1-207ENST00000471704 PTPRMP28827 1452 aa30.69■■■□□ 2.5
COMMD1-207ENST00000471704 CLIP1P30622 1438 aa30.68■■■□□ 2.5
COMMD1-207ENST00000471704 CASKIN1Q8WXD9 1431 aa30.68■■■□□ 2.5
COMMD1-207ENST00000471704 SCAPERQ9BY12 1400 aa30.67■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms