RNA–Protein interactions for RNA: ENST00000471396.1

TRIM59-204, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-204ENST00000471396 KIF27Q86VH2 1401 aa13.15□□□□□ -0.3
TRIM59-204ENST00000471396 GRIN2AQ12879 1464 aa13.15□□□□□ -0.3
TRIM59-204ENST00000471396 RIMBP3CA6NJZ7 1639 aa13.13□□□□□ -0.31
TRIM59-204ENST00000471396 RIMBP3BA6NNM3 1639 aa13.13□□□□□ -0.31
TRIM59-204ENST00000471396 RIMBP3Q9UFD9 1639 aa13.13□□□□□ -0.31
TRIM59-204ENST00000471396 ARHGEF11O15085 1522 aa13.13□□□□□ -0.31
TRIM59-204ENST00000471396 CNKSR2Q8WXI2 1034 aa13.1□□□□□ -0.31
TRIM59-204ENST00000471396 NUP160Q12769 1436 aa13.1□□□□□ -0.31
TRIM59-204ENST00000471396 CUL7Q14999 1698 aa13.09□□□□□ -0.31
TRIM59-204ENST00000471396 CEP170Q5SW79 1584 aa13.09□□□□□ -0.31
TRIM59-204ENST00000471396 IGF1RP08069 1367 aa13.07□□□□□ -0.32
TRIM59-204ENST00000471396 NPM3O75607 178 aaKnown RBP13.07□□□□□ -0.32
TRIM59-204ENST00000471396 TRIM41Q8WV44 630 aa13.05□□□□□ -0.32
TRIM59-204ENST00000471396 ARAP1Q96P48 1450 aa13.03□□□□□ -0.32
TRIM59-204ENST00000471396 CARMIL1Q5VZK9 1371 aa13.01□□□□□ -0.33
TRIM59-204ENST00000471396 RUSC2Q8N2Y8 1516 aa13.01□□□□□ -0.33
TRIM59-204ENST00000471396 SHROOM2Q13796 1616 aa13□□□□□ -0.33
TRIM59-204ENST00000471396 CYB5RLQ6IPT4 315 aa12.96□□□□□ -0.33
TRIM59-204ENST00000471396 ERCC6L2Q5T890 1561 aa12.95□□□□□ -0.34
TRIM59-204ENST00000471396 KIAA0586Q9BVV6 1533 aa12.95□□□□□ -0.34
TRIM59-204ENST00000471396 RAPGEF2Q9Y4G8 1499 aa12.94□□□□□ -0.34
TRIM59-204ENST00000471396 PRG4Q92954 1404 aaPredicted RBP12.91□□□□□ -0.34
TRIM59-204ENST00000471396 JPH4Q96JJ6 628 aa12.91□□□□□ -0.34
TRIM59-204ENST00000471396 SLC4A1APQ9BWU0 796 aaKnown RBP12.9□□□□□ -0.34
TRIM59-204ENST00000471396 PRXQ9BXM0 1461 aa12.9□□□□□ -0.34
TRIM59-204ENST00000471396 EEA1Q15075 1411 aa12.89□□□□□ -0.35
TRIM59-204ENST00000471396 IQGAP2Q13576 1575 aa12.89□□□□□ -0.35
TRIM59-204ENST00000471396 HOXD11P31277 338 aaPredicted RBP12.87□□□□□ -0.35
TRIM59-204ENST00000471396 CTTNBP2Q8WZ74 1663 aa12.84□□□□□ -0.35
TRIM59-204ENST00000471396 CSRNP3Q8WYN3 585 aa12.83□□□□□ -0.36
TRIM59-204ENST00000471396 EHMT2Q96KQ7 1210 aa12.83□□□□□ -0.36
TRIM59-204ENST00000471396 UGGT2Q9NYU1 1516 aa12.82□□□□□ -0.36
TRIM59-204ENST00000471396 CARMIL2Q6F5E8 1435 aa12.81□□□□□ -0.36
TRIM59-204ENST00000471396 DISP1Q96F81 1524 aa12.79□□□□□ -0.36
TRIM59-204ENST00000471396 RNF216Q9NWF9 866 aaPredicted RBP12.78□□□□□ -0.36
TRIM59-204ENST00000471396 KIF21BO75037 1637 aa12.77□□□□□ -0.36
TRIM59-204ENST00000471396 TNIKQ9UKE5 1360 aa12.77□□□□□ -0.37
TRIM59-204ENST00000471396 KIAA0556O60303 1618 aa12.77□□□□□ -0.37
TRIM59-204ENST00000471396 FAM9AQ8IZU1 332 aaPredicted RBP12.76□□□□□ -0.37
TRIM59-204ENST00000471396 PTPRGP23470 1445 aa12.75□□□□□ -0.37
TRIM59-204ENST00000471396 ADCY10Q96PN6 1610 aa12.74□□□□□ -0.37
TRIM59-204ENST00000471396 GOLGA3Q08378 1498 aa12.74□□□□□ -0.37
TRIM59-204ENST00000471396 TTBK1Q5TCY1 1321 aaPredicted RBP12.69□□□□□ -0.38
TRIM59-204ENST00000471396 TRHP20396 242 aaPredicted RBP12.69□□□□□ -0.38
TRIM59-204ENST00000471396 UHRF1BP1LA0JNW5 1464 aa12.68□□□□□ -0.38
TRIM59-204ENST00000471396 UACAQ9BZF9 1416 aa12.68□□□□□ -0.38
TRIM59-204ENST00000471396 SAMD9Q5K651 1589 aa12.68□□□□□ -0.38
TRIM59-204ENST00000471396 MAPKBP1O60336 1514 aa12.67□□□□□ -0.38
TRIM59-204ENST00000471396 ABCC2Q92887 1545 aa12.67□□□□□ -0.38
TRIM59-204ENST00000471396 NPM1P06748 294 aaKnown RBP eCLIP12.66□□□□□ -0.38
TRIM59-204ENST00000471396 ABCA8O94911 1581 aa12.63□□□□□ -0.39
TRIM59-204ENST00000471396 EFCAB5A4FU69 1503 aa12.62□□□□□ -0.39
TRIM59-204ENST00000471396 PLB1Q6P1J6 1458 aa12.62□□□□□ -0.39
TRIM59-204ENST00000471396 KDM5BQ9UGL1 1544 aa12.62□□□□□ -0.39
TRIM59-204ENST00000471396 ABCC10Q5T3U5 1492 aa12.61□□□□□ -0.39
TRIM59-204ENST00000471396 KIF13AQ9H1H9 1805 aa12.61□□□□□ -0.39
TRIM59-204ENST00000471396 DIP2BQ9P265 1576 aa12.6□□□□□ -0.39
TRIM59-204ENST00000471396 ZCCHC11Q5TAX3 1644 aaKnown RBP12.59□□□□□ -0.39
TRIM59-204ENST00000471396 UBTFP17480 764 aaKnown RBP12.59□□□□□ -0.39
TRIM59-204ENST00000471396 P3H3Q8IVL6 736 aa12.59□□□□□ -0.39
TRIM59-204ENST00000471396 FHOD3Q2V2M9 1422 aa12.58□□□□□ -0.4
TRIM59-204ENST00000471396 ASXL2Q76L83 1435 aa12.57□□□□□ -0.4
TRIM59-204ENST00000471396 RANGAP1P46060 587 aaPredicted RBP12.57□□□□□ -0.4
TRIM59-204ENST00000471396 RAPGEF6Q8TEU7 1601 aa12.55□□□□□ -0.4
TRIM59-204ENST00000471396 FAM69CQ0P6D2 419 aa12.55□□□□□ -0.4
TRIM59-204ENST00000471396 GLI2P10070 1586 aa12.53□□□□□ -0.4
TRIM59-204ENST00000471396 ARHGAP35Q9NRY4 1499 aa12.53□□□□□ -0.4
TRIM59-204ENST00000471396 WDR7Q9Y4E6 1490 aa12.53□□□□□ -0.4
TRIM59-204ENST00000471396 EPRSP07814 1512 aaKnown RBP12.51□□□□□ -0.41
TRIM59-204ENST00000471396 NUP153P49790 1475 aaKnown RBP12.5□□□□□ -0.41
TRIM59-204ENST00000471396 ATP10BO94823 1461 aa12.49□□□□□ -0.41
TRIM59-204ENST00000471396 TSPOAP1O95153 1857 aa12.48□□□□□ -0.41
TRIM59-204ENST00000471396 FMN1Q68DA7 1419 aa12.47□□□□□ -0.41
TRIM59-204ENST00000471396 ARID3CA6NKF2 412 aa12.47□□□□□ -0.41
TRIM59-204ENST00000471396 DCAF8L1A6NGE4 600 aa12.46□□□□□ -0.41
TRIM59-204ENST00000471396 MAP3K4Q9Y6R4 1608 aa12.46□□□□□ -0.41
TRIM59-204ENST00000471396 PPRC1Q5VV67 1664 aaKnown RBP12.45□□□□□ -0.42
TRIM59-204ENST00000471396 HECW1Q76N89 1606 aa12.44□□□□□ -0.42
TRIM59-204ENST00000471396 ZBTB22O15209 634 aa12.44□□□□□ -0.42
TRIM59-204ENST00000471396 CLIP1P30622 1438 aa12.44□□□□□ -0.42
TRIM59-204ENST00000471396 CFAP43Q8NDM7 1665 aa12.43□□□□□ -0.42
TRIM59-204ENST00000471396 TEX14Q8IWB6 1497 aa12.41□□□□□ -0.42
TRIM59-204ENST00000471396 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.41□□□□□ -0.42
TRIM59-204ENST00000471396 HNRNPUL2Q1KMD3 747 aaKnown RBP12.41□□□□□ -0.42
TRIM59-204ENST00000471396 CDK13Q14004 1512 aaKnown RBP12.41□□□□□ -0.42
TRIM59-204ENST00000471396 KDM6BO15054 1643 aa12.4□□□□□ -0.42
TRIM59-204ENST00000471396 PCF11O94913 1555 aaKnown RBP12.4□□□□□ -0.42
TRIM59-204ENST00000471396 KCNH8Q96L42 1107 aa12.4□□□□□ -0.42
TRIM59-204ENST00000471396 ABCA9Q8IUA7 1624 aa12.4□□□□□ -0.42
TRIM59-204ENST00000471396 MAGI3Q5TCQ9 1506 aa12.39□□□□□ -0.43
TRIM59-204ENST00000471396 CEP162Q5TB80 1403 aa12.38□□□□□ -0.43
TRIM59-204ENST00000471396 CD109Q6YHK3 1445 aa12.38□□□□□ -0.43
TRIM59-204ENST00000471396 CASKIN1Q8WXD9 1431 aa12.38□□□□□ -0.43
TRIM59-204ENST00000471396 FYCO1Q9BQS8 1478 aa12.37□□□□□ -0.43
TRIM59-204ENST00000471396 PLEKHD1A6NEE1 506 aa12.36□□□□□ -0.43
TRIM59-204ENST00000471396 LRRIQ1Q96JM4 1722 aa12.36□□□□□ -0.43
TRIM59-204ENST00000471396 ATP1B4Q9UN42 357 aaPredicted RBP12.35□□□□□ -0.43
TRIM59-204ENST00000471396 CCDC18Q5T9S5 1454 aa12.34□□□□□ -0.43
TRIM59-204ENST00000471396 FOXD4L1Q9NU39 408 aa12.34□□□□□ -0.43
TRIM59-204ENST00000471396 TTC37Q6PGP7 1564 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms