RNA–Protein interactions for RNA: ENST00000471357.1

LINC00880-201, long intergenic non-protein coding RNA 880, humanhuman

TSL 1 (best) BASIC

Gene LINC00880, Length 2,018 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00880-201ENST00000471357 GRIN2AQ12879 1464 aa18.82■□□□□ 0.6
LINC00880-201ENST00000471357 ARHGAP35Q9NRY4 1499 aa18.82■□□□□ 0.6
LINC00880-201ENST00000471357 VPS8Q8N3P4 1428 aa18.8■□□□□ 0.6
LINC00880-201ENST00000471357 ARAP1Q96P48 1450 aa18.79■□□□□ 0.6
LINC00880-201ENST00000471357 FBLN2P98095 1184 aa18.79■□□□□ 0.6
LINC00880-201ENST00000471357 EFCAB5A4FU69 1503 aa18.74■□□□□ 0.59
LINC00880-201ENST00000471357 KIAA0586Q9BVV6 1533 aa18.73■□□□□ 0.59
LINC00880-201ENST00000471357 IQGAP2Q13576 1575 aa18.73■□□□□ 0.59
LINC00880-201ENST00000471357 P3H3Q8IVL6 736 aa18.71■□□□□ 0.59
LINC00880-201ENST00000471357 NUP160Q12769 1436 aa18.69■□□□□ 0.58
LINC00880-201ENST00000471357 CEP170Q5SW79 1584 aa18.69■□□□□ 0.58
LINC00880-201ENST00000471357 SAMD9Q5K651 1589 aa18.67■□□□□ 0.58
LINC00880-201ENST00000471357 FHOD3Q2V2M9 1422 aa18.66■□□□□ 0.58
LINC00880-201ENST00000471357 PPARGC1BQ86YN6 1023 aaKnown RBP18.66■□□□□ 0.58
LINC00880-201ENST00000471357 APLP2Q06481 763 aa18.65■□□□□ 0.58
LINC00880-201ENST00000471357 UGGT2Q9NYU1 1516 aa18.65■□□□□ 0.58
LINC00880-201ENST00000471357 CHD1O14646 1710 aa18.62■□□□□ 0.57
LINC00880-201ENST00000471357 FMN1Q68DA7 1419 aa18.6■□□□□ 0.57
LINC00880-201ENST00000471357 TRIM26Q12899 539 aaPredicted RBP18.59■□□□□ 0.57
LINC00880-201ENST00000471357 JPH4Q96JJ6 628 aa18.58■□□□□ 0.56
LINC00880-201ENST00000471357 DISP1Q96F81 1524 aa18.56■□□□□ 0.56
LINC00880-201ENST00000471357 PCGF6Q9BYE7 350 aa18.55■□□□□ 0.56
LINC00880-201ENST00000471357 KIAA0556O60303 1618 aa18.54■□□□□ 0.56
LINC00880-201ENST00000471357 CASKIN1Q8WXD9 1431 aa18.53■□□□□ 0.56
LINC00880-201ENST00000471357 PCF11O94913 1555 aaKnown RBP18.53■□□□□ 0.56
LINC00880-201ENST00000471357 TTBK1Q5TCY1 1321 aaPredicted RBP18.53■□□□□ 0.56
LINC00880-201ENST00000471357 FYCO1Q9BQS8 1478 aa18.52■□□□□ 0.55
LINC00880-201ENST00000471357 CARMIL2Q6F5E8 1435 aa18.51■□□□□ 0.55
LINC00880-201ENST00000471357 ATP1B4Q9UN42 357 aaPredicted RBP18.51■□□□□ 0.55
LINC00880-201ENST00000471357 MAP3K1Q13233 1512 aa18.49■□□□□ 0.55
LINC00880-201ENST00000471357 KANK4Q5T7N3 995 aaPredicted RBP18.47■□□□□ 0.55
LINC00880-201ENST00000471357 TIAM1Q13009 1591 aa18.45■□□□□ 0.54
LINC00880-201ENST00000471357 PRG4Q92954 1404 aaPredicted RBP18.44■□□□□ 0.54
LINC00880-201ENST00000471357 CLASP1Q7Z460 1538 aa18.43■□□□□ 0.54
LINC00880-201ENST00000471357 SHROOM2Q13796 1616 aa18.42■□□□□ 0.54
LINC00880-201ENST00000471357 CFAP43Q8NDM7 1665 aa18.4■□□□□ 0.54
LINC00880-201ENST00000471357 HECW1Q76N89 1606 aa18.39■□□□□ 0.53
LINC00880-201ENST00000471357 LRRC9Q6ZRR7 1453 aa18.39■□□□□ 0.53
LINC00880-201ENST00000471357 OSCARQ8IYS5 282 aa18.36■□□□□ 0.53
LINC00880-201ENST00000471357 CCDC18Q5T9S5 1454 aa18.35■□□□□ 0.53
LINC00880-201ENST00000471357 LRRIQ1Q96JM4 1722 aa18.35■□□□□ 0.53
LINC00880-201ENST00000471357 RAPGEF6Q8TEU7 1601 aa18.34■□□□□ 0.53
LINC00880-201ENST00000471357 PTPRGP23470 1445 aa18.34■□□□□ 0.53
LINC00880-201ENST00000471357 EPRSP07814 1512 aaKnown RBP18.33■□□□□ 0.52
LINC00880-201ENST00000471357 PLB1Q6P1J6 1458 aa18.32■□□□□ 0.52
LINC00880-201ENST00000471357 NUP153P49790 1475 aaKnown RBP18.3■□□□□ 0.52
LINC00880-201ENST00000471357 ERCC6L2Q5T890 1561 aa18.3■□□□□ 0.52
LINC00880-201ENST00000471357 MTUS2Q5JR59 1369 aa18.3■□□□□ 0.52
LINC00880-201ENST00000471357 AEBP2Q6ZN18 517 aaPredicted RBP18.3■□□□□ 0.52
LINC00880-201ENST00000471357 ARID3CA6NKF2 412 aa18.28■□□□□ 0.52
LINC00880-201ENST00000471357 ABCA8O94911 1581 aa18.28■□□□□ 0.52
LINC00880-201ENST00000471357 CDK13Q14004 1512 aaKnown RBP18.28■□□□□ 0.52
LINC00880-201ENST00000471357 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.24■□□□□ 0.51
LINC00880-201ENST00000471357 HNRNPUL2Q1KMD3 747 aaKnown RBP18.24■□□□□ 0.51
LINC00880-201ENST00000471357 EHBP1L1Q8N3D4 1523 aa18.24■□□□□ 0.51
LINC00880-201ENST00000471357 CDK11AQ9UQ88 783 aaPredicted RBP18.23■□□□□ 0.51
LINC00880-201ENST00000471357 UACAQ9BZF9 1416 aa18.22■□□□□ 0.51
LINC00880-201ENST00000471357 MAGI3Q5TCQ9 1506 aa18.22■□□□□ 0.51
LINC00880-201ENST00000471357 PHLDB1Q86UU1 1377 aa18.22■□□□□ 0.51
LINC00880-201ENST00000471357 RRBP1Q9P2E9 1410 aaKnown RBP18.21■□□□□ 0.51
LINC00880-201ENST00000471357 SUPT6HQ7KZ85 1726 aaKnown RBP18.18■□□□□ 0.5
LINC00880-201ENST00000471357 ATP10BO94823 1461 aa18.18■□□□□ 0.5
LINC00880-201ENST00000471357 CCNB3Q8WWL7 1395 aa18.17■□□□□ 0.5
LINC00880-201ENST00000471357 NCOA2Q15596 1464 aa18.17■□□□□ 0.5
LINC00880-201ENST00000471357 ABCC2Q92887 1545 aa18.15■□□□□ 0.5
LINC00880-201ENST00000471357 ARHGEF11O15085 1522 aa18.13■□□□□ 0.49
LINC00880-201ENST00000471357 PLEKHD1A6NEE1 506 aa18.13■□□□□ 0.49
LINC00880-201ENST00000471357 TROQ12816 1431 aaPredicted RBP18.13■□□□□ 0.49
LINC00880-201ENST00000471357 UHRF1BP1LA0JNW5 1464 aa18.12■□□□□ 0.49
LINC00880-201ENST00000471357 MYOM3Q5VTT5 1437 aa18.11■□□□□ 0.49
LINC00880-201ENST00000471357 FGD6Q6ZV73 1430 aa18.09■□□□□ 0.49
LINC00880-201ENST00000471357 FAM50AQ14320 339 aaKnown RBP18.07■□□□□ 0.48
LINC00880-201ENST00000471357 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.06■□□□□ 0.48
LINC00880-201ENST00000471357 KDM5BQ9UGL1 1544 aa18.05■□□□□ 0.48
LINC00880-201ENST00000471357 ADCY10Q96PN6 1610 aa18.04■□□□□ 0.48
LINC00880-201ENST00000471357 MIA2Q96PC5 1412 aa18.02■□□□□ 0.48
LINC00880-201ENST00000471357 ITGAEP38570 1179 aa18.02■□□□□ 0.48
LINC00880-201ENST00000471357 KIF14Q15058 1648 aa18.01■□□□□ 0.47
LINC00880-201ENST00000471357 ZCCHC11Q5TAX3 1644 aaKnown RBP18.01■□□□□ 0.47
LINC00880-201ENST00000471357 PTPN23Q9H3S7 1636 aa17.99■□□□□ 0.47
LINC00880-201ENST00000471357 TCOF1Q13428 1488 aaKnown RBP17.98■□□□□ 0.47
LINC00880-201ENST00000471357 GPATCH8Q9UKJ3 1502 aaKnown RBP17.97■□□□□ 0.47
LINC00880-201ENST00000471357 ABCC10Q5T3U5 1492 aa17.97■□□□□ 0.47
LINC00880-201ENST00000471357 CFDP1Q9UEE9 299 aaPredicted RBP17.95■□□□□ 0.46
LINC00880-201ENST00000471357 ITSN2Q9NZM3 1697 aa17.94■□□□□ 0.46
LINC00880-201ENST00000471357 NPM1P06748 294 aaKnown RBP eCLIP17.93■□□□□ 0.46
LINC00880-201ENST00000471357 KCNH8Q96L42 1107 aa17.93■□□□□ 0.46
LINC00880-201ENST00000471357 HRCP23327 699 aa17.92■□□□□ 0.46
LINC00880-201ENST00000471357 RIMBP3CA6NJZ7 1639 aa17.91■□□□□ 0.46
LINC00880-201ENST00000471357 RIMBP3BA6NNM3 1639 aa17.91■□□□□ 0.46
LINC00880-201ENST00000471357 RIMBP3Q9UFD9 1639 aa17.91■□□□□ 0.46
LINC00880-201ENST00000471357 ZNF644Q9H582 1327 aaPredicted RBP17.89■□□□□ 0.45
LINC00880-201ENST00000471357 CDC42BPAQ5VT25 1732 aa17.89■□□□□ 0.45
LINC00880-201ENST00000471357 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.88■□□□□ 0.45
LINC00880-201ENST00000471357 CYB5RLQ6IPT4 315 aa17.88■□□□□ 0.45
LINC00880-201ENST00000471357 WDR7Q9Y4E6 1490 aa17.88■□□□□ 0.45
LINC00880-201ENST00000471357 PTPRKQ15262 1439 aa17.88■□□□□ 0.45
LINC00880-201ENST00000471357 CCER1Q8TC90 406 aaPredicted RBP17.88■□□□□ 0.45
LINC00880-201ENST00000471357 ZNF777Q9ULD5 760 aaPredicted RBP17.88■□□□□ 0.45
LINC00880-201ENST00000471357 CAMSAP2Q08AD1 1489 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms