RNA–Protein interactions for RNA: ENST00000471226.5

ABCF3-208, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 5

Gene ABCF3, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-208ENST00000471226 KIAA0586Q9BVV6 1533 aa25.56■■□□□ 1.68
ABCF3-208ENST00000471226 CYB5RLQ6IPT4 315 aa25.55■■□□□ 1.68
ABCF3-208ENST00000471226 ERCC6L2Q5T890 1561 aa25.54■■□□□ 1.68
ABCF3-208ENST00000471226 JPH4Q96JJ6 628 aa25.52■■□□□ 1.68
ABCF3-208ENST00000471226 PRXQ9BXM0 1461 aa25.5■■□□□ 1.67
ABCF3-208ENST00000471226 EEA1Q15075 1411 aa25.48■■□□□ 1.67
ABCF3-208ENST00000471226 PRG4Q92954 1404 aaPredicted RBP25.46■■□□□ 1.67
ABCF3-208ENST00000471226 CSRNP3Q8WYN3 585 aa25.45■■□□□ 1.66
ABCF3-208ENST00000471226 IQGAP2Q13576 1575 aa25.42■■□□□ 1.66
ABCF3-208ENST00000471226 CTTNBP2Q8WZ74 1663 aa25.39■■□□□ 1.65
ABCF3-208ENST00000471226 FAM9AQ8IZU1 332 aaPredicted RBP25.31■■□□□ 1.64
ABCF3-208ENST00000471226 UGGT2Q9NYU1 1516 aa25.3■■□□□ 1.64
ABCF3-208ENST00000471226 CARMIL2Q6F5E8 1435 aa25.26■■□□□ 1.63
ABCF3-208ENST00000471226 KIF21BO75037 1637 aa25.26■■□□□ 1.63
ABCF3-208ENST00000471226 DISP1Q96F81 1524 aa25.25■■□□□ 1.63
ABCF3-208ENST00000471226 KIAA0556O60303 1618 aa25.19■■□□□ 1.62
ABCF3-208ENST00000471226 TNIKQ9UKE5 1360 aa25.18■■□□□ 1.62
ABCF3-208ENST00000471226 PTPRGP23470 1445 aa25.16■■□□□ 1.62
ABCF3-208ENST00000471226 GOLGA3Q08378 1498 aa25.12■■□□□ 1.61
ABCF3-208ENST00000471226 ADCY10Q96PN6 1610 aa25.12■■□□□ 1.61
ABCF3-208ENST00000471226 TTBK1Q5TCY1 1321 aaPredicted RBP25.05■■□□□ 1.6
ABCF3-208ENST00000471226 SAMD9Q5K651 1589 aa25.04■■□□□ 1.6
ABCF3-208ENST00000471226 UHRF1BP1LA0JNW5 1464 aa25.02■■□□□ 1.6
ABCF3-208ENST00000471226 UACAQ9BZF9 1416 aa25.01■■□□□ 1.59
ABCF3-208ENST00000471226 TRHP20396 242 aaPredicted RBP24.99■■□□□ 1.59
ABCF3-208ENST00000471226 NPM1P06748 294 aaKnown RBP eCLIP24.98■■□□□ 1.59
ABCF3-208ENST00000471226 ABCC2Q92887 1545 aa24.97■■□□□ 1.59
ABCF3-208ENST00000471226 UBTFP17480 764 aaKnown RBP24.96■■□□□ 1.59
ABCF3-208ENST00000471226 MAPKBP1O60336 1514 aa24.96■■□□□ 1.59
ABCF3-208ENST00000471226 EHMT2Q96KQ7 1210 aa24.95■■□□□ 1.58
ABCF3-208ENST00000471226 P3H3Q8IVL6 736 aa24.92■■□□□ 1.58
ABCF3-208ENST00000471226 ABCA8O94911 1581 aa24.92■■□□□ 1.58
ABCF3-208ENST00000471226 PLB1Q6P1J6 1458 aa24.91■■□□□ 1.58
ABCF3-208ENST00000471226 KIF13AQ9H1H9 1805 aa24.9■■□□□ 1.58
ABCF3-208ENST00000471226 EFCAB5A4FU69 1503 aa24.9■■□□□ 1.58
ABCF3-208ENST00000471226 KDM5BQ9UGL1 1544 aa24.89■■□□□ 1.57
ABCF3-208ENST00000471226 RANGAP1P46060 587 aaPredicted RBP24.88■■□□□ 1.57
ABCF3-208ENST00000471226 ZCCHC11Q5TAX3 1644 aaKnown RBP24.85■■□□□ 1.57
ABCF3-208ENST00000471226 ABCC10Q5T3U5 1492 aa24.83■■□□□ 1.57
ABCF3-208ENST00000471226 FHOD3Q2V2M9 1422 aa24.83■■□□□ 1.57
ABCF3-208ENST00000471226 DIP2BQ9P265 1576 aa24.81■■□□□ 1.56
ABCF3-208ENST00000471226 RAPGEF6Q8TEU7 1601 aa24.79■■□□□ 1.56
ABCF3-208ENST00000471226 ASXL2Q76L83 1435 aa24.78■■□□□ 1.56
ABCF3-208ENST00000471226 ARHGAP35Q9NRY4 1499 aa24.78■■□□□ 1.56
ABCF3-208ENST00000471226 FAM69CQ0P6D2 419 aa24.74■■□□□ 1.55
ABCF3-208ENST00000471226 ATP10BO94823 1461 aa24.7■■□□□ 1.54
ABCF3-208ENST00000471226 GLI2P10070 1586 aa24.69■■□□□ 1.54
ABCF3-208ENST00000471226 NUP153P49790 1475 aaKnown RBP24.68■■□□□ 1.54
ABCF3-208ENST00000471226 WDR7Q9Y4E6 1490 aa24.66■■□□□ 1.54
ABCF3-208ENST00000471226 EPRSP07814 1512 aaKnown RBP24.66■■□□□ 1.54
ABCF3-208ENST00000471226 FMN1Q68DA7 1419 aa24.65■■□□□ 1.54
ABCF3-208ENST00000471226 TSPOAP1O95153 1857 aa24.62■■□□□ 1.53
ABCF3-208ENST00000471226 ARID3CA6NKF2 412 aa24.61■■□□□ 1.53
ABCF3-208ENST00000471226 CLIP1P30622 1438 aa24.6■■□□□ 1.53
ABCF3-208ENST00000471226 MAP3K4Q9Y6R4 1608 aa24.58■■□□□ 1.53
ABCF3-208ENST00000471226 PPRC1Q5VV67 1664 aaKnown RBP24.56■■□□□ 1.52
ABCF3-208ENST00000471226 HECW1Q76N89 1606 aa24.55■■□□□ 1.52
ABCF3-208ENST00000471226 LOC105371045A0A1W2PR82 267 aa24.54■■□□□ 1.52
ABCF3-208ENST00000471226 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.52■■□□□ 1.52
ABCF3-208ENST00000471226 HNRNPUL2Q1KMD3 747 aaKnown RBP24.52■■□□□ 1.52
ABCF3-208ENST00000471226 KCNH8Q96L42 1107 aa24.52■■□□□ 1.52
ABCF3-208ENST00000471226 CFAP43Q8NDM7 1665 aa24.52■■□□□ 1.52
ABCF3-208ENST00000471226 LRRIQ1Q96JM4 1722 aa24.5■■□□□ 1.51
ABCF3-208ENST00000471226 CEP162Q5TB80 1403 aa24.49■■□□□ 1.51
ABCF3-208ENST00000471226 CDK13Q14004 1512 aaKnown RBP24.49■■□□□ 1.51
ABCF3-208ENST00000471226 PCF11O94913 1555 aaKnown RBP24.47■■□□□ 1.51
ABCF3-208ENST00000471226 CASKIN1Q8WXD9 1431 aa24.47■■□□□ 1.51
ABCF3-208ENST00000471226 ABCA9Q8IUA7 1624 aa24.46■■□□□ 1.51
ABCF3-208ENST00000471226 PLEKHD1A6NEE1 506 aa24.45■■□□□ 1.5
ABCF3-208ENST00000471226 ATP1B4Q9UN42 357 aaPredicted RBP24.45■■□□□ 1.5
ABCF3-208ENST00000471226 CD109Q6YHK3 1445 aa24.44■■□□□ 1.5
ABCF3-208ENST00000471226 MAGI3Q5TCQ9 1506 aa24.41■■□□□ 1.5
ABCF3-208ENST00000471226 TEX14Q8IWB6 1497 aa24.41■■□□□ 1.5
ABCF3-208ENST00000471226 FYCO1Q9BQS8 1478 aa24.41■■□□□ 1.5
ABCF3-208ENST00000471226 KDM6BO15054 1643 aa24.39■■□□□ 1.5
ABCF3-208ENST00000471226 CCDC18Q5T9S5 1454 aa24.38■■□□□ 1.49
ABCF3-208ENST00000471226 CDK11AQ9UQ88 783 aaPredicted RBP24.34■■□□□ 1.49
ABCF3-208ENST00000471226 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.33■■□□□ 1.49
ABCF3-208ENST00000471226 TROQ12816 1431 aaPredicted RBP24.3■■□□□ 1.48
ABCF3-208ENST00000471226 TTC37Q6PGP7 1564 aa24.29■■□□□ 1.48
ABCF3-208ENST00000471226 COL17A1Q9UMD9 1497 aaPredicted RBP24.29■■□□□ 1.48
ABCF3-208ENST00000471226 KIF14Q15058 1648 aa24.26■■□□□ 1.47
ABCF3-208ENST00000471226 NEO1Q92859 1461 aa24.22■■□□□ 1.47
ABCF3-208ENST00000471226 PHLDB1Q86UU1 1377 aa24.22■■□□□ 1.47
ABCF3-208ENST00000471226 ARAP3Q8WWN8 1544 aa24.21■■□□□ 1.47
ABCF3-208ENST00000471226 VPS8Q8N3P4 1428 aa24.21■■□□□ 1.47
ABCF3-208ENST00000471226 MYO5CQ9NQX4 1742 aa24.21■■□□□ 1.47
ABCF3-208ENST00000471226 PLCH2O75038 1416 aa24.18■■□□□ 1.46
ABCF3-208ENST00000471226 CFAP74Q9C0B2 1584 aa24.17■■□□□ 1.46
ABCF3-208ENST00000471226 FANCAO15360 1455 aa24.15■■□□□ 1.46
ABCF3-208ENST00000471226 AKNAQ7Z591 1439 aa24.12■■□□□ 1.45
ABCF3-208ENST00000471226 CDC42BPBQ9Y5S2 1711 aa24.12■■□□□ 1.45
ABCF3-208ENST00000471226 CDC42BPAQ5VT25 1732 aa24.1■■□□□ 1.45
ABCF3-208ENST00000471226 TIAM1Q13009 1591 aa24.09■■□□□ 1.45
ABCF3-208ENST00000471226 PREX2Q70Z35 1606 aa24.09■■□□□ 1.45
ABCF3-208ENST00000471226 MTUS2Q5JR59 1369 aa24.08■■□□□ 1.45
ABCF3-208ENST00000471226 EHBP1L1Q8N3D4 1523 aa24.08■■□□□ 1.45
ABCF3-208ENST00000471226 EFCAB2Q5VUJ9 269 aa24.06■■□□□ 1.44
ABCF3-208ENST00000471226 FRMPD1Q5SYB0 1578 aa24.06■■□□□ 1.44
ABCF3-208ENST00000471226 RICTORQ6R327 1708 aa24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms