RNA–Protein interactions for RNA: ENST00000471122.5

GRIN1-211, Transcript of glutamate ionotropic receptor NMDA type subunit 1, humanhuman

TSL 1 (best)

Gene GRIN1, Length 4,184 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN1-211ENST00000471122 CUX2O14529 1486 aa17.12■□□□□ 0.33
GRIN1-211ENST00000471122 IRX6P78412 446 aaPredicted RBP17.11■□□□□ 0.33
GRIN1-211ENST00000471122 SALL2Q9Y467 1007 aaPredicted RBP17.08■□□□□ 0.32
GRIN1-211ENST00000471122 KDM2AQ9Y2K7 1162 aa17.07■□□□□ 0.32
GRIN1-211ENST00000471122 TSPY4P0CV99 314 aa17.07■□□□□ 0.32
GRIN1-211ENST00000471122 TSPY10P0CW01 314 aa17.07■□□□□ 0.32
GRIN1-211ENST00000471122 TMC1Q8TDI8 760 aa17.06■□□□□ 0.32
GRIN1-211ENST00000471122 SMARCA4P51532 1647 aa17.06■□□□□ 0.32
GRIN1-211ENST00000471122 CHMP7Q8WUX9 453 aaPredicted RBP17.06■□□□□ 0.32
GRIN1-211ENST00000471122 SMARCA2P51531 1590 aa17.05■□□□□ 0.32
GRIN1-211ENST00000471122 RAPGEF2Q9Y4G8 1499 aa17.05■□□□□ 0.32
GRIN1-211ENST00000471122 FHAD1B1AJZ9 1412 aa17.04■□□□□ 0.32
GRIN1-211ENST00000471122 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.03■□□□□ 0.32
GRIN1-211ENST00000471122 ANP32AP39687 249 aaKnown RBP16.99■□□□□ 0.31
GRIN1-211ENST00000471122 ATAD2BQ9ULI0 1458 aa16.99■□□□□ 0.31
GRIN1-211ENST00000471122 SUPT16HQ9Y5B9 1047 aaKnown RBP16.98■□□□□ 0.31
GRIN1-211ENST00000471122 NPM2Q86SE8 214 aaKnown RBP16.97■□□□□ 0.31
GRIN1-211ENST00000471122 SETD5Q9C0A6 1442 aa16.97■□□□□ 0.31
GRIN1-211ENST00000471122 CCDC136Q96JN2 1154 aa16.96■□□□□ 0.31
GRIN1-211ENST00000471122 RAB3GAP2Q9H2M9 1393 aa16.95■□□□□ 0.3
GRIN1-211ENST00000471122 CFDP1Q9UEE9 299 aaPredicted RBP16.94■□□□□ 0.3
GRIN1-211ENST00000471122 CANXP27824 592 aaKnown RBP16.94■□□□□ 0.3
GRIN1-211ENST00000471122 SENP3-EIF4A1A0A087X0R7 540 aa16.93■□□□□ 0.3
GRIN1-211ENST00000471122 TIMELESSQ9UNS1 1208 aa16.93■□□□□ 0.3
GRIN1-211ENST00000471122 PLEKHD1A6NEE1 506 aa16.92■□□□□ 0.3
GRIN1-211ENST00000471122 PEG3Q9GZU2 1588 aa16.9■□□□□ 0.3
GRIN1-211ENST00000471122 CHGAP10645 457 aaKnown RBP16.89■□□□□ 0.3
GRIN1-211ENST00000471122 RGL3Q3MIN7 710 aa16.87■□□□□ 0.29
GRIN1-211ENST00000471122 DHX57Q6P158 1386 aaKnown RBP16.86■□□□□ 0.29
GRIN1-211ENST00000471122 ARHGAP35Q9NRY4 1499 aa16.85■□□□□ 0.29
GRIN1-211ENST00000471122 TDRD9Q8NDG6 1382 aaKnown RBP16.84■□□□□ 0.29
GRIN1-211ENST00000471122 KCNH8Q96L42 1107 aa16.82■□□□□ 0.28
GRIN1-211ENST00000471122 PPP1R15AO75807 674 aaPredicted RBP16.81■□□□□ 0.28
GRIN1-211ENST00000471122 CADPSQ9ULU8 1353 aa16.81■□□□□ 0.28
GRIN1-211ENST00000471122 EIF4G1Q04637 1599 aaKnown RBP16.8■□□□□ 0.28
GRIN1-211ENST00000471122 CARD11Q9BXL7 1154 aa16.8■□□□□ 0.28
GRIN1-211ENST00000471122 CCER2I3L3R5 266 aa16.79■□□□□ 0.28
GRIN1-211ENST00000471122 FOXD1Q16676 465 aa16.79■□□□□ 0.28
GRIN1-211ENST00000471122 BCL11AQ9H165 835 aa16.79■□□□□ 0.28
GRIN1-211ENST00000471122 FHOD3Q2V2M9 1422 aa16.78■□□□□ 0.28
GRIN1-211ENST00000471122 HSPA5P11021 654 aaKnown RBP16.77■□□□□ 0.27
GRIN1-211ENST00000471122 WDR43Q15061 677 aaKnown RBP eCLIP16.77■□□□□ 0.27
GRIN1-211ENST00000471122 NBR1Q14596 966 aa16.76■□□□□ 0.27
GRIN1-211ENST00000471122 FMN1Q68DA7 1419 aa16.76■□□□□ 0.27
GRIN1-211ENST00000471122 ZBTB47Q9UFB7 747 aaPredicted RBP16.75■□□□□ 0.27
GRIN1-211ENST00000471122 NEFMP07197 916 aa16.74■□□□□ 0.27
GRIN1-211ENST00000471122 NPM1P06748 294 aaKnown RBP eCLIP16.71■□□□□ 0.27
GRIN1-211ENST00000471122 ANP32EQ9BTT0 268 aa16.71■□□□□ 0.27
GRIN1-211ENST00000471122 MPHOSPH9Q99550 1183 aa16.7■□□□□ 0.26
GRIN1-211ENST00000471122 PPP4R2Q9NY27 417 aa16.7■□□□□ 0.26
GRIN1-211ENST00000471122 B4GALNT3Q6L9W6 998 aa16.68■□□□□ 0.26
GRIN1-211ENST00000471122 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.68■□□□□ 0.26
GRIN1-211ENST00000471122 IGF1RP08069 1367 aa16.67■□□□□ 0.26
GRIN1-211ENST00000471122 DCAF11Q8TEB1 546 aa16.67■□□□□ 0.26
GRIN1-211ENST00000471122 KIF21BO75037 1637 aa16.67■□□□□ 0.26
GRIN1-211ENST00000471122 PKD2Q13563 968 aa16.64■□□□□ 0.25
GRIN1-211ENST00000471122 PDS5BQ9NTI5 1447 aa16.64■□□□□ 0.25
GRIN1-211ENST00000471122 L3MBTL2Q969R5 705 aa16.64■□□□□ 0.25
GRIN1-211ENST00000471122 STAG3Q9UJ98 1225 aa16.63■□□□□ 0.25
GRIN1-211ENST00000471122 SYNJ1O43426 1573 aa16.62■□□□□ 0.25
GRIN1-211ENST00000471122 KNSTRNQ9Y448 316 aa16.6■□□□□ 0.25
GRIN1-211ENST00000471122 RBM19Q9Y4C8 960 aaKnown RBP16.6■□□□□ 0.25
GRIN1-211ENST00000471122 SENP3Q9H4L4 574 aaPredicted RBP16.6■□□□□ 0.25
GRIN1-211ENST00000471122 ERCC6Q03468 1493 aa16.6■□□□□ 0.25
GRIN1-211ENST00000471122 SLC24A1O60721 1099 aa16.59■□□□□ 0.25
GRIN1-211ENST00000471122 TSHZ2Q9NRE2 1034 aa16.59■□□□□ 0.25
GRIN1-211ENST00000471122 FANCD2Q9BXW9 1451 aa16.58■□□□□ 0.24
GRIN1-211ENST00000471122 CC2D1BQ5T0F9 858 aaKnown RBP16.57■□□□□ 0.24
GRIN1-211ENST00000471122 UPF2Q9HAU5 1272 aaKnown RBP16.56■□□□□ 0.24
GRIN1-211ENST00000471122 FGD5Q6ZNL6 1462 aa16.56■□□□□ 0.24
GRIN1-211ENST00000471122 ARAP1Q96P48 1450 aa16.55■□□□□ 0.24
GRIN1-211ENST00000471122 PHLDB1Q86UU1 1377 aa16.54■□□□□ 0.24
GRIN1-211ENST00000471122 CDCA8Q53HL2 280 aa16.54■□□□□ 0.24
GRIN1-211ENST00000471122 NCAPD3P42695 1498 aa16.54■□□□□ 0.24
GRIN1-211ENST00000471122 ESF1Q9H501 851 aaKnown RBP16.53■□□□□ 0.24
GRIN1-211ENST00000471122 NUP155O75694 1391 aa16.52■□□□□ 0.23
GRIN1-211ENST00000471122 RAD54L2Q9Y4B4 1467 aa16.5■□□□□ 0.23
GRIN1-211ENST00000471122 DNAJC5BQ9UF47 199 aa16.48■□□□□ 0.23
GRIN1-211ENST00000471122 CCDC18Q5T9S5 1454 aa16.48■□□□□ 0.23
GRIN1-211ENST00000471122 NEUROD2Q15784 382 aa16.48■□□□□ 0.23
GRIN1-211ENST00000471122 TMF1P82094 1093 aa16.48■□□□□ 0.23
GRIN1-211ENST00000471122 PRXQ9BXM0 1461 aa16.47■□□□□ 0.23
GRIN1-211ENST00000471122 CARMIL2Q6F5E8 1435 aa16.46■□□□□ 0.23
GRIN1-211ENST00000471122 LRRC9Q6ZRR7 1453 aa16.46■□□□□ 0.23
GRIN1-211ENST00000471122 HSP90AA1P07900 732 aaKnown RBP16.46■□□□□ 0.23
GRIN1-211ENST00000471122 ANKRD30AQ9BXX3 1397 aa16.46■□□□□ 0.23
GRIN1-211ENST00000471122 ERICH3Q5RHP9 1530 aa16.45■□□□□ 0.22
GRIN1-211ENST00000471122 RRBP1Q9P2E9 1410 aaKnown RBP16.44■□□□□ 0.22
GRIN1-211ENST00000471122 HMGXB3Q12766 1538 aa16.44■□□□□ 0.22
GRIN1-211ENST00000471122 ERICH6BQ5W0A0 696 aa16.43■□□□□ 0.22
GRIN1-211ENST00000471122 HNRNPMP52272 730 aaKnown RBP eCLIP16.43■□□□□ 0.22
GRIN1-211ENST00000471122 FGD6Q6ZV73 1430 aa16.42■□□□□ 0.22
GRIN1-211ENST00000471122 TNNT2P45379 298 aaPredicted RBP16.42■□□□□ 0.22
GRIN1-211ENST00000471122 PLPPR3Q6T4P5 718 aa16.42■□□□□ 0.22
GRIN1-211ENST00000471122 NOP58Q9Y2X3 529 aaKnown RBP16.42■□□□□ 0.22
GRIN1-211ENST00000471122 PRKRIP1Q9H875 184 aaPredicted RBP16.41■□□□□ 0.22
GRIN1-211ENST00000471122 CFTRP13569 1480 aa16.41■□□□□ 0.22
GRIN1-211ENST00000471122 JPH4Q96JJ6 628 aa16.41■□□□□ 0.22
GRIN1-211ENST00000471122 RGS3P49796 1198 aa16.41■□□□□ 0.22
GRIN1-211ENST00000471122 TOP2BQ02880 1626 aa16.39■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms