RNA–Protein interactions for RNA: ENST00000471039.1

SCNM1-205, Transcript of sodium channel modifier 1, humanhuman

TSL 2

Gene SCNM1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-205ENST00000471039 RAPGEF2Q9Y4G8 1499 aa20.92■□□□□ 0.94
SCNM1-205ENST00000471039 PRXQ9BXM0 1461 aa20.88■□□□□ 0.93
SCNM1-205ENST00000471039 ERCC6L2Q5T890 1561 aa20.87■□□□□ 0.93
SCNM1-205ENST00000471039 ARAP1Q96P48 1450 aa20.87■□□□□ 0.93
SCNM1-205ENST00000471039 IQGAP2Q13576 1575 aa20.86■□□□□ 0.93
SCNM1-205ENST00000471039 KIAA0586Q9BVV6 1533 aa20.85■□□□□ 0.93
SCNM1-205ENST00000471039 KIF21BO75037 1637 aa20.82■□□□□ 0.92
SCNM1-205ENST00000471039 CSRNP3Q8WYN3 585 aa20.74■□□□□ 0.91
SCNM1-205ENST00000471039 PRG4Q92954 1404 aaPredicted RBP20.74■□□□□ 0.91
SCNM1-205ENST00000471039 UGGT2Q9NYU1 1516 aa20.71■□□□□ 0.91
SCNM1-205ENST00000471039 KIAA0556O60303 1618 aa20.68■□□□□ 0.9
SCNM1-205ENST00000471039 FAM9AQ8IZU1 332 aaPredicted RBP20.68■□□□□ 0.9
SCNM1-205ENST00000471039 JPH4Q96JJ6 628 aa20.68■□□□□ 0.9
SCNM1-205ENST00000471039 DISP1Q96F81 1524 aa20.64■□□□□ 0.9
SCNM1-205ENST00000471039 CYB5RLQ6IPT4 315 aa20.62■□□□□ 0.89
SCNM1-205ENST00000471039 GOLGA3Q08378 1498 aa20.61■□□□□ 0.89
SCNM1-205ENST00000471039 CARMIL2Q6F5E8 1435 aa20.6■□□□□ 0.89
SCNM1-205ENST00000471039 SAMD9Q5K651 1589 aa20.59■□□□□ 0.89
SCNM1-205ENST00000471039 ADCY10Q96PN6 1610 aa20.56■□□□□ 0.88
SCNM1-205ENST00000471039 TNIKQ9UKE5 1360 aa20.51■□□□□ 0.87
SCNM1-205ENST00000471039 EFCAB5A4FU69 1503 aa20.48■□□□□ 0.87
SCNM1-205ENST00000471039 PTPRGP23470 1445 aa20.46■□□□□ 0.87
SCNM1-205ENST00000471039 ABCC2Q92887 1545 aa20.44■□□□□ 0.86
SCNM1-205ENST00000471039 EHMT2Q96KQ7 1210 aa20.41■□□□□ 0.86
SCNM1-205ENST00000471039 UHRF1BP1LA0JNW5 1464 aa20.41■□□□□ 0.86
SCNM1-205ENST00000471039 ABCA8O94911 1581 aa20.41■□□□□ 0.86
SCNM1-205ENST00000471039 ZCCHC11Q5TAX3 1644 aaKnown RBP20.38■□□□□ 0.85
SCNM1-205ENST00000471039 MAPKBP1O60336 1514 aa20.38■□□□□ 0.85
SCNM1-205ENST00000471039 UACAQ9BZF9 1416 aa20.37■□□□□ 0.85
SCNM1-205ENST00000471039 PLB1Q6P1J6 1458 aa20.37■□□□□ 0.85
SCNM1-205ENST00000471039 KIF13AQ9H1H9 1805 aa20.37■□□□□ 0.85
SCNM1-205ENST00000471039 TTBK1Q5TCY1 1321 aaPredicted RBP20.36■□□□□ 0.85
SCNM1-205ENST00000471039 RAPGEF6Q8TEU7 1601 aa20.36■□□□□ 0.85
SCNM1-205ENST00000471039 UBTFP17480 764 aaKnown RBP20.36■□□□□ 0.85
SCNM1-205ENST00000471039 FHOD3Q2V2M9 1422 aa20.36■□□□□ 0.85
SCNM1-205ENST00000471039 ARHGAP35Q9NRY4 1499 aa20.33■□□□□ 0.85
SCNM1-205ENST00000471039 KDM5BQ9UGL1 1544 aa20.32■□□□□ 0.84
SCNM1-205ENST00000471039 RANGAP1P46060 587 aaPredicted RBP20.29■□□□□ 0.84
SCNM1-205ENST00000471039 DIP2BQ9P265 1576 aa20.29■□□□□ 0.84
SCNM1-205ENST00000471039 P3H3Q8IVL6 736 aa20.28■□□□□ 0.84
SCNM1-205ENST00000471039 HECW1Q76N89 1606 aa20.22■□□□□ 0.83
SCNM1-205ENST00000471039 NPM1P06748 294 aaKnown RBP eCLIP20.21■□□□□ 0.83
SCNM1-205ENST00000471039 NUP153P49790 1475 aaKnown RBP20.21■□□□□ 0.83
SCNM1-205ENST00000471039 LRRIQ1Q96JM4 1722 aa20.21■□□□□ 0.83
SCNM1-205ENST00000471039 ABCC10Q5T3U5 1492 aa20.2■□□□□ 0.82
SCNM1-205ENST00000471039 PCF11O94913 1555 aaKnown RBP20.2■□□□□ 0.82
SCNM1-205ENST00000471039 ASXL2Q76L83 1435 aa20.19■□□□□ 0.82
SCNM1-205ENST00000471039 CLIP1P30622 1438 aa20.19■□□□□ 0.82
SCNM1-205ENST00000471039 FMN1Q68DA7 1419 aa20.19■□□□□ 0.82
SCNM1-205ENST00000471039 TRHP20396 242 aaPredicted RBP20.16■□□□□ 0.82
SCNM1-205ENST00000471039 CEP162Q5TB80 1403 aa20.16■□□□□ 0.82
SCNM1-205ENST00000471039 WDR7Q9Y4E6 1490 aa20.15■□□□□ 0.82
SCNM1-205ENST00000471039 GLI2P10070 1586 aa20.14■□□□□ 0.81
SCNM1-205ENST00000471039 ATP10BO94823 1461 aa20.14■□□□□ 0.81
SCNM1-205ENST00000471039 TSPOAP1O95153 1857 aa20.13■□□□□ 0.81
SCNM1-205ENST00000471039 MAP3K4Q9Y6R4 1608 aa20.13■□□□□ 0.81
SCNM1-205ENST00000471039 PPRC1Q5VV67 1664 aaKnown RBP20.11■□□□□ 0.81
SCNM1-205ENST00000471039 EPRSP07814 1512 aaKnown RBP20.11■□□□□ 0.81
SCNM1-205ENST00000471039 CDK13Q14004 1512 aaKnown RBP20.11■□□□□ 0.81
SCNM1-205ENST00000471039 CFAP43Q8NDM7 1665 aa20.09■□□□□ 0.81
SCNM1-205ENST00000471039 FYCO1Q9BQS8 1478 aa20.07■□□□□ 0.8
SCNM1-205ENST00000471039 LOC105371045A0A1W2PR82 267 aa20.06■□□□□ 0.8
SCNM1-205ENST00000471039 ARID3CA6NKF2 412 aa20.05■□□□□ 0.8
SCNM1-205ENST00000471039 CASKIN1Q8WXD9 1431 aa20.04■□□□□ 0.8
SCNM1-205ENST00000471039 ABCA9Q8IUA7 1624 aa20.04■□□□□ 0.8
SCNM1-205ENST00000471039 CCDC18Q5T9S5 1454 aa20.01■□□□□ 0.79
SCNM1-205ENST00000471039 FAM69CQ0P6D2 419 aa20.01■□□□□ 0.79
SCNM1-205ENST00000471039 TTC37Q6PGP7 1564 aa19.96■□□□□ 0.79
SCNM1-205ENST00000471039 KIF14Q15058 1648 aa19.95■□□□□ 0.78
SCNM1-205ENST00000471039 MAGI3Q5TCQ9 1506 aa19.92■□□□□ 0.78
SCNM1-205ENST00000471039 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.92■□□□□ 0.78
SCNM1-205ENST00000471039 KDM6BO15054 1643 aa19.92■□□□□ 0.78
SCNM1-205ENST00000471039 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.92■□□□□ 0.78
SCNM1-205ENST00000471039 HNRNPUL2Q1KMD3 747 aaKnown RBP19.92■□□□□ 0.78
SCNM1-205ENST00000471039 MYO5CQ9NQX4 1742 aa19.91■□□□□ 0.78
SCNM1-205ENST00000471039 VPS8Q8N3P4 1428 aa19.91■□□□□ 0.78
SCNM1-205ENST00000471039 TEX14Q8IWB6 1497 aa19.91■□□□□ 0.78
SCNM1-205ENST00000471039 ATP1B4Q9UN42 357 aaPredicted RBP19.9■□□□□ 0.78
SCNM1-205ENST00000471039 TROQ12816 1431 aaPredicted RBP19.88■□□□□ 0.77
SCNM1-205ENST00000471039 CD109Q6YHK3 1445 aa19.87■□□□□ 0.77
SCNM1-205ENST00000471039 KCNH8Q96L42 1107 aa19.87■□□□□ 0.77
SCNM1-205ENST00000471039 CFAP74Q9C0B2 1584 aa19.87■□□□□ 0.77
SCNM1-205ENST00000471039 TIAM1Q13009 1591 aa19.85■□□□□ 0.77
SCNM1-205ENST00000471039 PLEKHD1A6NEE1 506 aa19.84■□□□□ 0.77
SCNM1-205ENST00000471039 EHBP1L1Q8N3D4 1523 aa19.83■□□□□ 0.77
SCNM1-205ENST00000471039 PREX2Q70Z35 1606 aa19.83■□□□□ 0.76
SCNM1-205ENST00000471039 CDC42BPAQ5VT25 1732 aa19.82■□□□□ 0.76
SCNM1-205ENST00000471039 CDC42BPBQ9Y5S2 1711 aa19.8■□□□□ 0.76
SCNM1-205ENST00000471039 CDK11AQ9UQ88 783 aaPredicted RBP19.8■□□□□ 0.76
SCNM1-205ENST00000471039 ARAP3Q8WWN8 1544 aa19.79■□□□□ 0.76
SCNM1-205ENST00000471039 NEO1Q92859 1461 aa19.76■□□□□ 0.75
SCNM1-205ENST00000471039 SUPT6HQ7KZ85 1726 aaKnown RBP19.76■□□□□ 0.75
SCNM1-205ENST00000471039 MAP3K1Q13233 1512 aa19.75■□□□□ 0.75
SCNM1-205ENST00000471039 ITSN2Q9NZM3 1697 aa19.75■□□□□ 0.75
SCNM1-205ENST00000471039 FRMPD1Q5SYB0 1578 aa19.74■□□□□ 0.75
SCNM1-205ENST00000471039 RICTORQ6R327 1708 aa19.73■□□□□ 0.75
SCNM1-205ENST00000471039 FANCAO15360 1455 aa19.73■□□□□ 0.75
SCNM1-205ENST00000471039 COL17A1Q9UMD9 1497 aaPredicted RBP19.73■□□□□ 0.75
SCNM1-205ENST00000471039 MTUS2Q5JR59 1369 aa19.71■□□□□ 0.75
SCNM1-205ENST00000471039 PLCH2O75038 1416 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms