RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 CLIP1P30622 1438 aa15.49■□□□□ 0.07
CCM2-204ENST00000470837 KIAA0586Q9BVV6 1533 aa15.43■□□□□ 0.06
CCM2-204ENST00000470837 NUP160Q12769 1436 aa15.41■□□□□ 0.06
CCM2-204ENST00000470837 CTTNBP2Q8WZ74 1663 aa15.39■□□□□ 0.05
CCM2-204ENST00000470837 IQGAP2Q13576 1575 aa15.39■□□□□ 0.05
CCM2-204ENST00000470837 CEP170Q5SW79 1584 aa15.36■□□□□ 0.05
CCM2-204ENST00000470837 EFCAB5A4FU69 1503 aa15.35■□□□□ 0.05
CCM2-204ENST00000470837 P3H3Q8IVL6 736 aa15.35■□□□□ 0.05
CCM2-204ENST00000470837 JPH4Q96JJ6 628 aa15.35■□□□□ 0.05
CCM2-204ENST00000470837 CHD1O14646 1710 aa15.34■□□□□ 0.05
CCM2-204ENST00000470837 OSCARQ8IYS5 282 aa15.34■□□□□ 0.05
CCM2-204ENST00000470837 CARMIL2Q6F5E8 1435 aa15.33■□□□□ 0.04
CCM2-204ENST00000470837 ARHGAP35Q9NRY4 1499 aa15.33■□□□□ 0.04
CCM2-204ENST00000470837 APLP2Q06481 763 aa15.32■□□□□ 0.04
CCM2-204ENST00000470837 UGGT2Q9NYU1 1516 aa15.3■□□□□ 0.04
CCM2-204ENST00000470837 VPS8Q8N3P4 1428 aa15.29■□□□□ 0.04
CCM2-204ENST00000470837 ARAP1Q96P48 1450 aa15.27■□□□□ 0.04
CCM2-204ENST00000470837 FHOD3Q2V2M9 1422 aa15.27■□□□□ 0.04
CCM2-204ENST00000470837 FMN1Q68DA7 1419 aa15.26■□□□□ 0.03
CCM2-204ENST00000470837 ATP1B4Q9UN42 357 aaPredicted RBP15.25■□□□□ 0.03
CCM2-204ENST00000470837 PRG4Q92954 1404 aaPredicted RBP15.25■□□□□ 0.03
CCM2-204ENST00000470837 SAMD9Q5K651 1589 aa15.24■□□□□ 0.03
CCM2-204ENST00000470837 TTBK1Q5TCY1 1321 aaPredicted RBP15.24■□□□□ 0.03
CCM2-204ENST00000470837 CLASP1Q7Z460 1538 aa15.22■□□□□ 0.03
CCM2-204ENST00000470837 DISP1Q96F81 1524 aa15.22■□□□□ 0.03
CCM2-204ENST00000470837 KIAA0556O60303 1618 aa15.21■□□□□ 0.02
CCM2-204ENST00000470837 PTPRGP23470 1445 aa15.17■□□□□ 0.02
CCM2-204ENST00000470837 CASKIN1Q8WXD9 1431 aa15.16■□□□□ 0.02
CCM2-204ENST00000470837 SHROOM2Q13796 1616 aa15.15■□□□□ 0.02
CCM2-204ENST00000470837 FYCO1Q9BQS8 1478 aa15.14■□□□□ 0.01
CCM2-204ENST00000470837 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.1■□□□□ 0.01
CCM2-204ENST00000470837 HNRNPUL2Q1KMD3 747 aaKnown RBP15.1■□□□□ 0.01
CCM2-204ENST00000470837 PCF11O94913 1555 aaKnown RBP15.1■□□□□ 0.01
CCM2-204ENST00000470837 PPARGC1BQ86YN6 1023 aaKnown RBP15.09■□□□□ 0.01
CCM2-204ENST00000470837 HECW1Q76N89 1606 aa15.07■□□□□ 0
CCM2-204ENST00000470837 DNAJC5Q9H3Z4 198 aa15.07■□□□□ 0
CCM2-204ENST00000470837 CDK11AQ9UQ88 783 aaPredicted RBP15.07■□□□□ 0
CCM2-204ENST00000470837 CCDC18Q5T9S5 1454 aa15.07■□□□□ 0
CCM2-204ENST00000470837 UACAQ9BZF9 1416 aa15.05■□□□□ -0
CCM2-204ENST00000470837 PLB1Q6P1J6 1458 aa15.05■□□□□ -0
CCM2-204ENST00000470837 MAP3K1Q13233 1512 aa15.05■□□□□ -0
CCM2-204ENST00000470837 RAPGEF6Q8TEU7 1601 aa15.04■□□□□ -0
CCM2-204ENST00000470837 ERCC6L2Q5T890 1561 aa15.04■□□□□ -0
CCM2-204ENST00000470837 ARID3CA6NKF2 412 aa15.04■□□□□ -0
CCM2-204ENST00000470837 MTUS2Q5JR59 1369 aa15.02■□□□□ -0
CCM2-204ENST00000470837 TIAM1Q13009 1591 aa15.01□□□□□ -0.01
CCM2-204ENST00000470837 EPRSP07814 1512 aaKnown RBP15.01□□□□□ -0.01
CCM2-204ENST00000470837 KANK4Q5T7N3 995 aaPredicted RBP15□□□□□ -0.01
CCM2-204ENST00000470837 NUP153P49790 1475 aaKnown RBP15□□□□□ -0.01
CCM2-204ENST00000470837 ABCA8O94911 1581 aa14.99□□□□□ -0.01
CCM2-204ENST00000470837 ARHGEF11O15085 1522 aa14.98□□□□□ -0.01
CCM2-204ENST00000470837 NPM1P06748 294 aaKnown RBP eCLIP14.98□□□□□ -0.01
CCM2-204ENST00000470837 LRRC9Q6ZRR7 1453 aa14.97□□□□□ -0.01
CCM2-204ENST00000470837 PLEKHD1A6NEE1 506 aa14.97□□□□□ -0.01
CCM2-204ENST00000470837 TRIM26Q12899 539 aaPredicted RBP14.97□□□□□ -0.01
CCM2-204ENST00000470837 ABCC2Q92887 1545 aa14.97□□□□□ -0.01
CCM2-204ENST00000470837 UHRF1BP1LA0JNW5 1464 aa14.95□□□□□ -0.02
CCM2-204ENST00000470837 CFAP43Q8NDM7 1665 aa14.95□□□□□ -0.02
CCM2-204ENST00000470837 CDK13Q14004 1512 aaKnown RBP14.95□□□□□ -0.02
CCM2-204ENST00000470837 CYB5RLQ6IPT4 315 aa14.93□□□□□ -0.02
CCM2-204ENST00000470837 ATP10BO94823 1461 aa14.92□□□□□ -0.02
CCM2-204ENST00000470837 EHBP1L1Q8N3D4 1523 aa14.92□□□□□ -0.02
CCM2-204ENST00000470837 TROQ12816 1431 aaPredicted RBP14.89□□□□□ -0.03
CCM2-204ENST00000470837 RIMBP3CA6NJZ7 1639 aa14.88□□□□□ -0.03
CCM2-204ENST00000470837 RIMBP3BA6NNM3 1639 aa14.88□□□□□ -0.03
CCM2-204ENST00000470837 RIMBP3Q9UFD9 1639 aa14.88□□□□□ -0.03
CCM2-204ENST00000470837 KDM5BQ9UGL1 1544 aa14.87□□□□□ -0.03
CCM2-204ENST00000470837 PCGF6Q9BYE7 350 aa14.86□□□□□ -0.03
CCM2-204ENST00000470837 LRRIQ1Q96JM4 1722 aa14.84□□□□□ -0.03
CCM2-204ENST00000470837 ADCY10Q96PN6 1610 aa14.84□□□□□ -0.03
CCM2-204ENST00000470837 CCNB3Q8WWL7 1395 aa14.84□□□□□ -0.03
CCM2-204ENST00000470837 SUPT6HQ7KZ85 1726 aaKnown RBP14.83□□□□□ -0.03
CCM2-204ENST00000470837 NCOA2Q15596 1464 aa14.83□□□□□ -0.03
CCM2-204ENST00000470837 KCNH8Q96L42 1107 aa14.82□□□□□ -0.04
CCM2-204ENST00000470837 MAGI3Q5TCQ9 1506 aa14.82□□□□□ -0.04
CCM2-204ENST00000470837 PHLDB1Q86UU1 1377 aa14.81□□□□□ -0.04
CCM2-204ENST00000470837 ZCCHC11Q5TAX3 1644 aaKnown RBP14.81□□□□□ -0.04
CCM2-204ENST00000470837 FAM50AQ14320 339 aaKnown RBP14.79□□□□□ -0.04
CCM2-204ENST00000470837 KIF14Q15058 1648 aa14.79□□□□□ -0.04
CCM2-204ENST00000470837 MYOM3Q5VTT5 1437 aa14.79□□□□□ -0.04
CCM2-204ENST00000470837 WDR7Q9Y4E6 1490 aa14.78□□□□□ -0.04
CCM2-204ENST00000470837 ASXL2Q76L83 1435 aa14.77□□□□□ -0.04
CCM2-204ENST00000470837 CFDP1Q9UEE9 299 aaPredicted RBP14.77□□□□□ -0.05
CCM2-204ENST00000470837 RRBP1Q9P2E9 1410 aaKnown RBP14.76□□□□□ -0.05
CCM2-204ENST00000470837 FGD6Q6ZV73 1430 aa14.75□□□□□ -0.05
CCM2-204ENST00000470837 MIA2Q96PC5 1412 aa14.75□□□□□ -0.05
CCM2-204ENST00000470837 ZNF777Q9ULD5 760 aaPredicted RBP14.72□□□□□ -0.05
CCM2-204ENST00000470837 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.72□□□□□ -0.05
CCM2-204ENST00000470837 ITGAEP38570 1179 aa14.71□□□□□ -0.05
CCM2-204ENST00000470837 GPATCH8Q9UKJ3 1502 aaKnown RBP14.7□□□□□ -0.06
CCM2-204ENST00000470837 ABCC10Q5T3U5 1492 aa14.69□□□□□ -0.06
CCM2-204ENST00000470837 MAPKBP1O60336 1514 aa14.68□□□□□ -0.06
CCM2-204ENST00000470837 ITSN2Q9NZM3 1697 aa14.68□□□□□ -0.06
CCM2-204ENST00000470837 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.67□□□□□ -0.06
CCM2-204ENST00000470837 EFCAB2Q5VUJ9 269 aa14.67□□□□□ -0.06
CCM2-204ENST00000470837 PTPN23Q9H3S7 1636 aa14.66□□□□□ -0.06
CCM2-204ENST00000470837 ARHGAP5Q13017 1502 aa14.66□□□□□ -0.06
CCM2-204ENST00000470837 PLCH2O75038 1416 aa14.65□□□□□ -0.06
CCM2-204ENST00000470837 TCOF1Q13428 1488 aaKnown RBP14.64□□□□□ -0.07
CCM2-204ENST00000470837 TTC37Q6PGP7 1564 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms