RNA–Protein interactions for RNA: ENST00000470637.1

ABCD4-206, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 853 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-206ENST00000470637 CARMIL1Q5VZK9 1371 aa19.05■□□□□ 0.64
ABCD4-206ENST00000470637 CUL7Q14999 1698 aa19.03■□□□□ 0.64
ABCD4-206ENST00000470637 RUSC2Q8N2Y8 1516 aa19.03■□□□□ 0.64
ABCD4-206ENST00000470637 KIAA0586Q9BVV6 1533 aa19■□□□□ 0.63
ABCD4-206ENST00000470637 RAPGEF2Q9Y4G8 1499 aa18.87■□□□□ 0.61
ABCD4-206ENST00000470637 TTBK1Q5TCY1 1321 aaPredicted RBP18.86■□□□□ 0.61
ABCD4-206ENST00000470637 NPM1P06748 294 aaKnown RBP eCLIP18.83■□□□□ 0.6
ABCD4-206ENST00000470637 IQGAP2Q13576 1575 aa18.81■□□□□ 0.6
ABCD4-206ENST00000470637 PTPRGP23470 1445 aa18.81■□□□□ 0.6
ABCD4-206ENST00000470637 CARMIL2Q6F5E8 1435 aa18.8■□□□□ 0.6
ABCD4-206ENST00000470637 ADCY10Q96PN6 1610 aa18.78■□□□□ 0.6
ABCD4-206ENST00000470637 TNIKQ9UKE5 1360 aa18.78■□□□□ 0.6
ABCD4-206ENST00000470637 DISP1Q96F81 1524 aa18.75■□□□□ 0.59
ABCD4-206ENST00000470637 FAM69CQ0P6D2 419 aa18.73■□□□□ 0.59
ABCD4-206ENST00000470637 PRXQ9BXM0 1461 aa18.72■□□□□ 0.59
ABCD4-206ENST00000470637 UGGT2Q9NYU1 1516 aa18.71■□□□□ 0.59
ABCD4-206ENST00000470637 MAPKBP1O60336 1514 aa18.7■□□□□ 0.58
ABCD4-206ENST00000470637 KIF13AQ9H1H9 1805 aa18.7■□□□□ 0.58
ABCD4-206ENST00000470637 CSRNP3Q8WYN3 585 aa18.7■□□□□ 0.58
ABCD4-206ENST00000470637 ABCC10Q5T3U5 1492 aa18.7■□□□□ 0.58
ABCD4-206ENST00000470637 UACAQ9BZF9 1416 aa18.66■□□□□ 0.58
ABCD4-206ENST00000470637 CHIC1Q5VXU3 224 aa18.65■□□□□ 0.58
ABCD4-206ENST00000470637 KIAA0556O60303 1618 aa18.64■□□□□ 0.57
ABCD4-206ENST00000470637 CTTNBP2Q8WZ74 1663 aa18.64■□□□□ 0.57
ABCD4-206ENST00000470637 ABCC2Q92887 1545 aa18.64■□□□□ 0.57
ABCD4-206ENST00000470637 FAM9AQ8IZU1 332 aaPredicted RBP18.63■□□□□ 0.57
ABCD4-206ENST00000470637 UHRF1BP1LA0JNW5 1464 aa18.63■□□□□ 0.57
ABCD4-206ENST00000470637 DIP2BQ9P265 1576 aa18.63■□□□□ 0.57
ABCD4-206ENST00000470637 ASXL2Q76L83 1435 aa18.58■□□□□ 0.57
ABCD4-206ENST00000470637 P3H3Q8IVL6 736 aa18.57■□□□□ 0.56
ABCD4-206ENST00000470637 GOLGA3Q08378 1498 aa18.57■□□□□ 0.56
ABCD4-206ENST00000470637 EEA1Q15075 1411 aa18.56■□□□□ 0.56
ABCD4-206ENST00000470637 KDM5BQ9UGL1 1544 aa18.55■□□□□ 0.56
ABCD4-206ENST00000470637 PLB1Q6P1J6 1458 aa18.55■□□□□ 0.56
ABCD4-206ENST00000470637 RANGAP1P46060 587 aaPredicted RBP18.51■□□□□ 0.55
ABCD4-206ENST00000470637 ZCCHC11Q5TAX3 1644 aaKnown RBP18.5■□□□□ 0.55
ABCD4-206ENST00000470637 TSPOAP1O95153 1857 aa18.5■□□□□ 0.55
ABCD4-206ENST00000470637 ABCA8O94911 1581 aa18.48■□□□□ 0.55
ABCD4-206ENST00000470637 GLI2P10070 1586 aa18.47■□□□□ 0.55
ABCD4-206ENST00000470637 EPRSP07814 1512 aaKnown RBP18.45■□□□□ 0.54
ABCD4-206ENST00000470637 EHMT2Q96KQ7 1210 aa18.45■□□□□ 0.54
ABCD4-206ENST00000470637 ARID3CA6NKF2 412 aa18.44■□□□□ 0.54
ABCD4-206ENST00000470637 KDM6BO15054 1643 aa18.42■□□□□ 0.54
ABCD4-206ENST00000470637 AEBP2Q6ZN18 517 aaPredicted RBP18.42■□□□□ 0.54
ABCD4-206ENST00000470637 KCNH8Q96L42 1107 aa18.42■□□□□ 0.54
ABCD4-206ENST00000470637 WDR7Q9Y4E6 1490 aa18.41■□□□□ 0.54
ABCD4-206ENST00000470637 SAMD9Q5K651 1589 aa18.41■□□□□ 0.54
ABCD4-206ENST00000470637 PPRC1Q5VV67 1664 aaKnown RBP18.39■□□□□ 0.53
ABCD4-206ENST00000470637 KIF21BO75037 1637 aa18.38■□□□□ 0.53
ABCD4-206ENST00000470637 MAP3K4Q9Y6R4 1608 aa18.38■□□□□ 0.53
ABCD4-206ENST00000470637 ATP10BO94823 1461 aa18.37■□□□□ 0.53
ABCD4-206ENST00000470637 UBTFP17480 764 aaKnown RBP18.36■□□□□ 0.53
ABCD4-206ENST00000470637 FHOD3Q2V2M9 1422 aa18.35■□□□□ 0.53
ABCD4-206ENST00000470637 COL17A1Q9UMD9 1497 aaPredicted RBP18.33■□□□□ 0.53
ABCD4-206ENST00000470637 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.32■□□□□ 0.52
ABCD4-206ENST00000470637 HNRNPUL2Q1KMD3 747 aaKnown RBP18.32■□□□□ 0.52
ABCD4-206ENST00000470637 CD109Q6YHK3 1445 aa18.32■□□□□ 0.52
ABCD4-206ENST00000470637 RAPGEF6Q8TEU7 1601 aa18.31■□□□□ 0.52
ABCD4-206ENST00000470637 TEX14Q8IWB6 1497 aa18.3■□□□□ 0.52
ABCD4-206ENST00000470637 NUP153P49790 1475 aaKnown RBP18.27■□□□□ 0.52
ABCD4-206ENST00000470637 EFCAB5A4FU69 1503 aa18.25■□□□□ 0.51
ABCD4-206ENST00000470637 MAGI3Q5TCQ9 1506 aa18.25■□□□□ 0.51
ABCD4-206ENST00000470637 CFAP43Q8NDM7 1665 aa18.25■□□□□ 0.51
ABCD4-206ENST00000470637 KDM4FA0A1W2PPD8 638 aa18.24■□□□□ 0.51
ABCD4-206ENST00000470637 PLEKHD1A6NEE1 506 aa18.2■□□□□ 0.5
ABCD4-206ENST00000470637 ATP1B4Q9UN42 357 aaPredicted RBP18.19■□□□□ 0.5
ABCD4-206ENST00000470637 ARHGAP35Q9NRY4 1499 aa18.19■□□□□ 0.5
ABCD4-206ENST00000470637 ABCA9Q8IUA7 1624 aa18.16■□□□□ 0.5
ABCD4-206ENST00000470637 CDK13Q14004 1512 aaKnown RBP18.13■□□□□ 0.49
ABCD4-206ENST00000470637 FMN1Q68DA7 1419 aa18.12■□□□□ 0.49
ABCD4-206ENST00000470637 ARAP3Q8WWN8 1544 aa18.11■□□□□ 0.49
ABCD4-206ENST00000470637 RAPGEF3O95398 923 aa18.09■□□□□ 0.49
ABCD4-206ENST00000470637 PHLDB1Q86UU1 1377 aa18.08■□□□□ 0.49
ABCD4-206ENST00000470637 ADGRL1O94910 1474 aa18.07■□□□□ 0.48
ABCD4-206ENST00000470637 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.07■□□□□ 0.48
ABCD4-206ENST00000470637 NEO1Q92859 1461 aa18.06■□□□□ 0.48
ABCD4-206ENST00000470637 HECW1Q76N89 1606 aa18.04■□□□□ 0.48
ABCD4-206ENST00000470637 CDK11AQ9UQ88 783 aaPredicted RBP18.02■□□□□ 0.48
ABCD4-206ENST00000470637 TTC37Q6PGP7 1564 aa18.01■□□□□ 0.47
ABCD4-206ENST00000470637 AKNAQ7Z591 1439 aa18■□□□□ 0.47
ABCD4-206ENST00000470637 FANCAO15360 1455 aa18■□□□□ 0.47
ABCD4-206ENST00000470637 LRRIQ1Q96JM4 1722 aa17.98■□□□□ 0.47
ABCD4-206ENST00000470637 PLCH2O75038 1416 aa17.97■□□□□ 0.47
ABCD4-206ENST00000470637 CLIP1P30622 1438 aa17.97■□□□□ 0.47
ABCD4-206ENST00000470637 FRMPD1Q5SYB0 1578 aa17.96■□□□□ 0.47
ABCD4-206ENST00000470637 DENND4BO75064 1496 aaPredicted RBP17.96■□□□□ 0.47
ABCD4-206ENST00000470637 CASKIN1Q8WXD9 1431 aa17.96■□□□□ 0.47
ABCD4-206ENST00000470637 TROQ12816 1431 aaPredicted RBP17.95■□□□□ 0.46
ABCD4-206ENST00000470637 PCF11O94913 1555 aaKnown RBP17.94■□□□□ 0.46
ABCD4-206ENST00000470637 KIF14Q15058 1648 aa17.94■□□□□ 0.46
ABCD4-206ENST00000470637 LOC105371045A0A1W2PR82 267 aa17.93■□□□□ 0.46
ABCD4-206ENST00000470637 EFCAB2Q5VUJ9 269 aa17.92■□□□□ 0.46
ABCD4-206ENST00000470637 CFAP74Q9C0B2 1584 aa17.91■□□□□ 0.46
ABCD4-206ENST00000470637 SCAPERQ9BY12 1400 aa17.9■□□□□ 0.46
ABCD4-206ENST00000470637 RICTORQ6R327 1708 aa17.89■□□□□ 0.46
ABCD4-206ENST00000470637 CCDC18Q5T9S5 1454 aa17.89■□□□□ 0.45
ABCD4-206ENST00000470637 ARID4BQ4LE39 1312 aaPredicted RBP17.89■□□□□ 0.45
ABCD4-206ENST00000470637 FYCO1Q9BQS8 1478 aa17.87■□□□□ 0.45
ABCD4-206ENST00000470637 MYO5CQ9NQX4 1742 aa17.86■□□□□ 0.45
ABCD4-206ENST00000470637 YEATS2Q9ULM3 1422 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms