RNA–Protein interactions for RNA: ENST00000470458.1

RFTN1-208, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 4

Gene RFTN1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-208ENST00000470458 RAPGEF2Q9Y4G8 1499 aa18.24■□□□□ 0.51
RFTN1-208ENST00000470458 RUSC2Q8N2Y8 1516 aa18.23■□□□□ 0.51
RFTN1-208ENST00000470458 PRG4Q92954 1404 aaPredicted RBP18.23■□□□□ 0.51
RFTN1-208ENST00000470458 EEA1Q15075 1411 aa18.22■□□□□ 0.51
RFTN1-208ENST00000470458 CARMIL2Q6F5E8 1435 aa18.19■□□□□ 0.5
RFTN1-208ENST00000470458 FAM9AQ8IZU1 332 aaPredicted RBP18.16■□□□□ 0.5
RFTN1-208ENST00000470458 NPM1P06748 294 aaKnown RBP eCLIP18.14■□□□□ 0.49
RFTN1-208ENST00000470458 IQGAP2Q13576 1575 aa18.13■□□□□ 0.49
RFTN1-208ENST00000470458 CSRNP3Q8WYN3 585 aa18.13■□□□□ 0.49
RFTN1-208ENST00000470458 TRHP20396 242 aaPredicted RBP18.11■□□□□ 0.49
RFTN1-208ENST00000470458 ERCC6L2Q5T890 1561 aa18.09■□□□□ 0.49
RFTN1-208ENST00000470458 PRXQ9BXM0 1461 aa18.09■□□□□ 0.49
RFTN1-208ENST00000470458 TNIKQ9UKE5 1360 aa18.06■□□□□ 0.48
RFTN1-208ENST00000470458 GOLGA3Q08378 1498 aa18.06■□□□□ 0.48
RFTN1-208ENST00000470458 CTTNBP2Q8WZ74 1663 aa18.05■□□□□ 0.48
RFTN1-208ENST00000470458 PTPRGP23470 1445 aa18.05■□□□□ 0.48
RFTN1-208ENST00000470458 UGGT2Q9NYU1 1516 aa18.03■□□□□ 0.48
RFTN1-208ENST00000470458 CHIC1Q5VXU3 224 aa18.02■□□□□ 0.48
RFTN1-208ENST00000470458 DISP1Q96F81 1524 aa17.94■□□□□ 0.46
RFTN1-208ENST00000470458 KIAA0556O60303 1618 aa17.92■□□□□ 0.46
RFTN1-208ENST00000470458 UHRF1BP1LA0JNW5 1464 aa17.92■□□□□ 0.46
RFTN1-208ENST00000470458 MAPKBP1O60336 1514 aa17.92■□□□□ 0.46
RFTN1-208ENST00000470458 UACAQ9BZF9 1416 aa17.91■□□□□ 0.46
RFTN1-208ENST00000470458 KIF21BO75037 1637 aa17.9■□□□□ 0.46
RFTN1-208ENST00000470458 ADCY10Q96PN6 1610 aa17.9■□□□□ 0.46
RFTN1-208ENST00000470458 TTBK1Q5TCY1 1321 aaPredicted RBP17.88■□□□□ 0.45
RFTN1-208ENST00000470458 ABCC2Q92887 1545 aa17.88■□□□□ 0.45
RFTN1-208ENST00000470458 PLB1Q6P1J6 1458 aa17.84■□□□□ 0.45
RFTN1-208ENST00000470458 ABCC10Q5T3U5 1492 aa17.83■□□□□ 0.45
RFTN1-208ENST00000470458 UBTFP17480 764 aaKnown RBP17.82■□□□□ 0.44
RFTN1-208ENST00000470458 FAM69CQ0P6D2 419 aa17.82■□□□□ 0.44
RFTN1-208ENST00000470458 KDM5BQ9UGL1 1544 aa17.79■□□□□ 0.44
RFTN1-208ENST00000470458 KIF13AQ9H1H9 1805 aa17.78■□□□□ 0.44
RFTN1-208ENST00000470458 EFCAB5A4FU69 1503 aa17.77■□□□□ 0.44
RFTN1-208ENST00000470458 SAMD9Q5K651 1589 aa17.77■□□□□ 0.44
RFTN1-208ENST00000470458 ASXL2Q76L83 1435 aa17.74■□□□□ 0.43
RFTN1-208ENST00000470458 ABCA8O94911 1581 aa17.74■□□□□ 0.43
RFTN1-208ENST00000470458 DIP2BQ9P265 1576 aa17.74■□□□□ 0.43
RFTN1-208ENST00000470458 GLI2P10070 1586 aa17.71■□□□□ 0.43
RFTN1-208ENST00000470458 P3H3Q8IVL6 736 aa17.71■□□□□ 0.43
RFTN1-208ENST00000470458 ZCCHC11Q5TAX3 1644 aaKnown RBP17.71■□□□□ 0.43
RFTN1-208ENST00000470458 RANGAP1P46060 587 aaPredicted RBP17.66■□□□□ 0.42
RFTN1-208ENST00000470458 WDR7Q9Y4E6 1490 aa17.66■□□□□ 0.42
RFTN1-208ENST00000470458 RAPGEF6Q8TEU7 1601 aa17.65■□□□□ 0.42
RFTN1-208ENST00000470458 FMN1Q68DA7 1419 aa17.64■□□□□ 0.42
RFTN1-208ENST00000470458 TEX14Q8IWB6 1497 aa17.64■□□□□ 0.41
RFTN1-208ENST00000470458 EPRSP07814 1512 aaKnown RBP17.63■□□□□ 0.41
RFTN1-208ENST00000470458 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.62■□□□□ 0.41
RFTN1-208ENST00000470458 HNRNPUL2Q1KMD3 747 aaKnown RBP17.62■□□□□ 0.41
RFTN1-208ENST00000470458 TSPOAP1O95153 1857 aa17.61■□□□□ 0.41
RFTN1-208ENST00000470458 FHOD3Q2V2M9 1422 aa17.6■□□□□ 0.41
RFTN1-208ENST00000470458 ATP10BO94823 1461 aa17.59■□□□□ 0.41
RFTN1-208ENST00000470458 PLEKHD1A6NEE1 506 aa17.59■□□□□ 0.41
RFTN1-208ENST00000470458 CDK11AQ9UQ88 783 aaPredicted RBP17.59■□□□□ 0.41
RFTN1-208ENST00000470458 KCNH8Q96L42 1107 aa17.58■□□□□ 0.4
RFTN1-208ENST00000470458 EHMT2Q96KQ7 1210 aa17.57■□□□□ 0.4
RFTN1-208ENST00000470458 CFAP43Q8NDM7 1665 aa17.57■□□□□ 0.4
RFTN1-208ENST00000470458 MAP3K4Q9Y6R4 1608 aa17.57■□□□□ 0.4
RFTN1-208ENST00000470458 KDM6BO15054 1643 aa17.54■□□□□ 0.4
RFTN1-208ENST00000470458 PHLDB1Q86UU1 1377 aa17.54■□□□□ 0.4
RFTN1-208ENST00000470458 CD109Q6YHK3 1445 aa17.54■□□□□ 0.4
RFTN1-208ENST00000470458 NUP153P49790 1475 aaKnown RBP17.53■□□□□ 0.4
RFTN1-208ENST00000470458 ARHGAP35Q9NRY4 1499 aa17.52■□□□□ 0.4
RFTN1-208ENST00000470458 MAGI3Q5TCQ9 1506 aa17.52■□□□□ 0.39
RFTN1-208ENST00000470458 HECW1Q76N89 1606 aa17.5■□□□□ 0.39
RFTN1-208ENST00000470458 ARID3CA6NKF2 412 aa17.48■□□□□ 0.39
RFTN1-208ENST00000470458 ATP1B4Q9UN42 357 aaPredicted RBP17.48■□□□□ 0.39
RFTN1-208ENST00000470458 ABCA9Q8IUA7 1624 aa17.47■□□□□ 0.39
RFTN1-208ENST00000470458 PPRC1Q5VV67 1664 aaKnown RBP17.46■□□□□ 0.39
RFTN1-208ENST00000470458 CLIP1P30622 1438 aa17.46■□□□□ 0.39
RFTN1-208ENST00000470458 CCDC18Q5T9S5 1454 aa17.43■□□□□ 0.38
RFTN1-208ENST00000470458 CASKIN1Q8WXD9 1431 aa17.42■□□□□ 0.38
RFTN1-208ENST00000470458 NEO1Q92859 1461 aa17.4■□□□□ 0.38
RFTN1-208ENST00000470458 FYCO1Q9BQS8 1478 aa17.38■□□□□ 0.37
RFTN1-208ENST00000470458 CFAP74Q9C0B2 1584 aa17.38■□□□□ 0.37
RFTN1-208ENST00000470458 AEBP2Q6ZN18 517 aaPredicted RBP17.38■□□□□ 0.37
RFTN1-208ENST00000470458 ARAP3Q8WWN8 1544 aa17.37■□□□□ 0.37
RFTN1-208ENST00000470458 TROQ12816 1431 aaPredicted RBP17.34■□□□□ 0.37
RFTN1-208ENST00000470458 CDK13Q14004 1512 aaKnown RBP17.34■□□□□ 0.37
RFTN1-208ENST00000470458 CEP162Q5TB80 1403 aa17.32■□□□□ 0.36
RFTN1-208ENST00000470458 KIF14Q15058 1648 aa17.32■□□□□ 0.36
RFTN1-208ENST00000470458 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.31■□□□□ 0.36
RFTN1-208ENST00000470458 EFCAB2Q5VUJ9 269 aa17.31■□□□□ 0.36
RFTN1-208ENST00000470458 PLCH2O75038 1416 aa17.3■□□□□ 0.36
RFTN1-208ENST00000470458 PCF11O94913 1555 aaKnown RBP17.29■□□□□ 0.36
RFTN1-208ENST00000470458 FANCAO15360 1455 aa17.29■□□□□ 0.36
RFTN1-208ENST00000470458 MYO5CQ9NQX4 1742 aa17.28■□□□□ 0.36
RFTN1-208ENST00000470458 COL17A1Q9UMD9 1497 aaPredicted RBP17.28■□□□□ 0.36
RFTN1-208ENST00000470458 AKNAQ7Z591 1439 aa17.27■□□□□ 0.35
RFTN1-208ENST00000470458 DENND4BO75064 1496 aaPredicted RBP17.25■□□□□ 0.35
RFTN1-208ENST00000470458 TTC37Q6PGP7 1564 aa17.23■□□□□ 0.35
RFTN1-208ENST00000470458 LRRIQ1Q96JM4 1722 aa17.23■□□□□ 0.35
RFTN1-208ENST00000470458 MAGI2Q86UL8 1455 aa17.21■□□□□ 0.35
RFTN1-208ENST00000470458 MTUS2Q5JR59 1369 aa17.21■□□□□ 0.35
RFTN1-208ENST00000470458 LOC105371045A0A1W2PR82 267 aa17.21■□□□□ 0.35
RFTN1-208ENST00000470458 ADGRL1O94910 1474 aa17.19■□□□□ 0.34
RFTN1-208ENST00000470458 RAPGEF3O95398 923 aa17.19■□□□□ 0.34
RFTN1-208ENST00000470458 ARHGAP5Q13017 1502 aa17.19■□□□□ 0.34
RFTN1-208ENST00000470458 APLP2Q06481 763 aa17.17■□□□□ 0.34
RFTN1-208ENST00000470458 VPS8Q8N3P4 1428 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms