RNA–Protein interactions for RNA: ENST00000470280.1

LDHB-205, Transcript of lactate dehydrogenase B, humanhuman

TSL 2

Gene LDHB, Length 710 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-205ENST00000470280 IGF1RP08069 1367 aa18.08■□□□□ 0.49
LDHB-205ENST00000470280 CEP170Q5SW79 1584 aa18.08■□□□□ 0.48
LDHB-205ENST00000470280 ARAP1Q96P48 1450 aa18.07■□□□□ 0.48
LDHB-205ENST00000470280 CYB5RLQ6IPT4 315 aa18.05■□□□□ 0.48
LDHB-205ENST00000470280 PPP6R1Q9UPN7 881 aa17.99■□□□□ 0.47
LDHB-205ENST00000470280 RUSC2Q8N2Y8 1516 aa17.98■□□□□ 0.47
LDHB-205ENST00000470280 ERCC6L2Q5T890 1561 aa17.97■□□□□ 0.47
LDHB-205ENST00000470280 ADRA2BP18089 450 aa17.96■□□□□ 0.47
LDHB-205ENST00000470280 CUL7Q14999 1698 aa17.96■□□□□ 0.47
LDHB-205ENST00000470280 CARMIL1Q5VZK9 1371 aa17.95■□□□□ 0.46
LDHB-205ENST00000470280 SHROOM2Q13796 1616 aa17.94■□□□□ 0.46
LDHB-205ENST00000470280 JPH4Q96JJ6 628 aa17.89■□□□□ 0.45
LDHB-205ENST00000470280 PRG4Q92954 1404 aaPredicted RBP17.88■□□□□ 0.45
LDHB-205ENST00000470280 KIAA0586Q9BVV6 1533 aa17.87■□□□□ 0.45
LDHB-205ENST00000470280 RAPGEF2Q9Y4G8 1499 aa17.82■□□□□ 0.44
LDHB-205ENST00000470280 PRXQ9BXM0 1461 aa17.75■□□□□ 0.43
LDHB-205ENST00000470280 IQGAP2Q13576 1575 aa17.73■□□□□ 0.43
LDHB-205ENST00000470280 TRHP20396 242 aaPredicted RBP17.7■□□□□ 0.42
LDHB-205ENST00000470280 CSRNP3Q8WYN3 585 aa17.69■□□□□ 0.42
LDHB-205ENST00000470280 DISP1Q96F81 1524 aa17.67■□□□□ 0.42
LDHB-205ENST00000470280 FAM9AQ8IZU1 332 aaPredicted RBP17.65■□□□□ 0.42
LDHB-205ENST00000470280 UGGT2Q9NYU1 1516 aa17.65■□□□□ 0.42
LDHB-205ENST00000470280 CARMIL2Q6F5E8 1435 aa17.64■□□□□ 0.42
LDHB-205ENST00000470280 TTBK1Q5TCY1 1321 aaPredicted RBP17.64■□□□□ 0.41
LDHB-205ENST00000470280 EEA1Q15075 1411 aa17.64■□□□□ 0.41
LDHB-205ENST00000470280 PTPRGP23470 1445 aa17.63■□□□□ 0.41
LDHB-205ENST00000470280 TNIKQ9UKE5 1360 aa17.62■□□□□ 0.41
LDHB-205ENST00000470280 ADCY10Q96PN6 1610 aa17.61■□□□□ 0.41
LDHB-205ENST00000470280 CTTNBP2Q8WZ74 1663 aa17.61■□□□□ 0.41
LDHB-205ENST00000470280 KIAA0556O60303 1618 aa17.58■□□□□ 0.4
LDHB-205ENST00000470280 NPM1P06748 294 aaKnown RBP eCLIP17.52■□□□□ 0.4
LDHB-205ENST00000470280 UACAQ9BZF9 1416 aa17.51■□□□□ 0.39
LDHB-205ENST00000470280 MAPKBP1O60336 1514 aa17.5■□□□□ 0.39
LDHB-205ENST00000470280 UHRF1BP1LA0JNW5 1464 aa17.5■□□□□ 0.39
LDHB-205ENST00000470280 GOLGA3Q08378 1498 aa17.5■□□□□ 0.39
LDHB-205ENST00000470280 ABCC2Q92887 1545 aa17.49■□□□□ 0.39
LDHB-205ENST00000470280 KIF21BO75037 1637 aa17.49■□□□□ 0.39
LDHB-205ENST00000470280 P3H3Q8IVL6 736 aa17.46■□□□□ 0.39
LDHB-205ENST00000470280 EHMT2Q96KQ7 1210 aa17.46■□□□□ 0.39
LDHB-205ENST00000470280 ABCC10Q5T3U5 1492 aa17.45■□□□□ 0.38
LDHB-205ENST00000470280 PLB1Q6P1J6 1458 aa17.45■□□□□ 0.38
LDHB-205ENST00000470280 KIF13AQ9H1H9 1805 aa17.45■□□□□ 0.38
LDHB-205ENST00000470280 FAM69CQ0P6D2 419 aa17.43■□□□□ 0.38
LDHB-205ENST00000470280 SAMD9Q5K651 1589 aa17.43■□□□□ 0.38
LDHB-205ENST00000470280 KDM5BQ9UGL1 1544 aa17.42■□□□□ 0.38
LDHB-205ENST00000470280 DIP2BQ9P265 1576 aa17.42■□□□□ 0.38
LDHB-205ENST00000470280 RANGAP1P46060 587 aaPredicted RBP17.42■□□□□ 0.38
LDHB-205ENST00000470280 ABCA8O94911 1581 aa17.4■□□□□ 0.38
LDHB-205ENST00000470280 ASXL2Q76L83 1435 aa17.4■□□□□ 0.38
LDHB-205ENST00000470280 ZCCHC11Q5TAX3 1644 aaKnown RBP17.37■□□□□ 0.37
LDHB-205ENST00000470280 UBTFP17480 764 aaKnown RBP17.36■□□□□ 0.37
LDHB-205ENST00000470280 FHOD3Q2V2M9 1422 aa17.35■□□□□ 0.37
LDHB-205ENST00000470280 ARID3CA6NKF2 412 aa17.31■□□□□ 0.36
LDHB-205ENST00000470280 EPRSP07814 1512 aaKnown RBP17.3■□□□□ 0.36
LDHB-205ENST00000470280 EFCAB5A4FU69 1503 aa17.29■□□□□ 0.36
LDHB-205ENST00000470280 GLI2P10070 1586 aa17.28■□□□□ 0.36
LDHB-205ENST00000470280 ATP10BO94823 1461 aa17.28■□□□□ 0.36
LDHB-205ENST00000470280 WDR7Q9Y4E6 1490 aa17.28■□□□□ 0.36
LDHB-205ENST00000470280 RAPGEF6Q8TEU7 1601 aa17.27■□□□□ 0.36
LDHB-205ENST00000470280 ARHGAP35Q9NRY4 1499 aa17.25■□□□□ 0.35
LDHB-205ENST00000470280 NUP153P49790 1475 aaKnown RBP17.24■□□□□ 0.35
LDHB-205ENST00000470280 TSPOAP1O95153 1857 aa17.24■□□□□ 0.35
LDHB-205ENST00000470280 PPRC1Q5VV67 1664 aaKnown RBP17.23■□□□□ 0.35
LDHB-205ENST00000470280 KCNH8Q96L42 1107 aa17.22■□□□□ 0.35
LDHB-205ENST00000470280 MAP3K4Q9Y6R4 1608 aa17.21■□□□□ 0.35
LDHB-205ENST00000470280 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.16■□□□□ 0.34
LDHB-205ENST00000470280 HNRNPUL2Q1KMD3 747 aaKnown RBP17.16■□□□□ 0.34
LDHB-205ENST00000470280 KDM6BO15054 1643 aa17.15■□□□□ 0.34
LDHB-205ENST00000470280 FMN1Q68DA7 1419 aa17.13■□□□□ 0.33
LDHB-205ENST00000470280 CD109Q6YHK3 1445 aa17.13■□□□□ 0.33
LDHB-205ENST00000470280 COL17A1Q9UMD9 1497 aaPredicted RBP17.13■□□□□ 0.33
LDHB-205ENST00000470280 CDK13Q14004 1512 aaKnown RBP17.11■□□□□ 0.33
LDHB-205ENST00000470280 CFAP43Q8NDM7 1665 aa17.1■□□□□ 0.33
LDHB-205ENST00000470280 TEX14Q8IWB6 1497 aa17.1■□□□□ 0.33
LDHB-205ENST00000470280 MAGI3Q5TCQ9 1506 aa17.1■□□□□ 0.33
LDHB-205ENST00000470280 ATP1B4Q9UN42 357 aaPredicted RBP17.09■□□□□ 0.33
LDHB-205ENST00000470280 CLIP1P30622 1438 aa17.09■□□□□ 0.33
LDHB-205ENST00000470280 ABCA9Q8IUA7 1624 aa17.07■□□□□ 0.32
LDHB-205ENST00000470280 PLEKHD1A6NEE1 506 aa17.07■□□□□ 0.32
LDHB-205ENST00000470280 HECW1Q76N89 1606 aa17.07■□□□□ 0.32
LDHB-205ENST00000470280 LOC105371045A0A1W2PR82 267 aa17.04■□□□□ 0.32
LDHB-205ENST00000470280 PCF11O94913 1555 aaKnown RBP17.03■□□□□ 0.32
LDHB-205ENST00000470280 LRRIQ1Q96JM4 1722 aa17.02■□□□□ 0.32
LDHB-205ENST00000470280 CASKIN1Q8WXD9 1431 aa17.02■□□□□ 0.31
LDHB-205ENST00000470280 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.01■□□□□ 0.312e-11■■□□□ 11.4
LDHB-205ENST00000470280 TTC37Q6PGP7 1564 aa16.98■□□□□ 0.31
LDHB-205ENST00000470280 CEP162Q5TB80 1403 aa16.98■□□□□ 0.31
LDHB-205ENST00000470280 ARAP3Q8WWN8 1544 aa16.96■□□□□ 0.3
LDHB-205ENST00000470280 FYCO1Q9BQS8 1478 aa16.95■□□□□ 0.3
LDHB-205ENST00000470280 TROQ12816 1431 aaPredicted RBP16.95■□□□□ 0.3
LDHB-205ENST00000470280 NEO1Q92859 1461 aa16.94■□□□□ 0.3
LDHB-205ENST00000470280 CDK11AQ9UQ88 783 aaPredicted RBP16.94■□□□□ 0.3
LDHB-205ENST00000470280 KIF14Q15058 1648 aa16.94■□□□□ 0.3
LDHB-205ENST00000470280 CCDC18Q5T9S5 1454 aa16.93■□□□□ 0.3
LDHB-205ENST00000470280 PHLDB1Q86UU1 1377 aa16.91■□□□□ 0.3
LDHB-205ENST00000470280 RAPGEF3O95398 923 aa16.91■□□□□ 0.3
LDHB-205ENST00000470280 PLCH2O75038 1416 aa16.9■□□□□ 0.3
LDHB-205ENST00000470280 FANCAO15360 1455 aa16.9■□□□□ 0.3
LDHB-205ENST00000470280 AKNAQ7Z591 1439 aa16.89■□□□□ 0.29
LDHB-205ENST00000470280 KDM4FA0A1W2PPD8 638 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms