RNA–Protein interactions for RNA: ENST00000469908.5

ABCA17P-202, Transcript of ATP binding cassette subfamily A member 17, pseudogene, humanhuman

TSL 1 (best) BASIC

Gene ABCA17P, Length 4,188 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA17P-202ENST00000469908 GOLGA3Q08378 1498 aa19.59■□□□□ 0.73
ABCA17P-202ENST00000469908 PLEKHG5O94827 1062 aa19.58■□□□□ 0.73
ABCA17P-202ENST00000469908 MLECQ14165 292 aa19.58■□□□□ 0.72
ABCA17P-202ENST00000469908 RUSC2Q8N2Y8 1516 aa19.57■□□□□ 0.72
ABCA17P-202ENST00000469908 TOP2AP11388 1531 aaKnown RBP19.56■□□□□ 0.72
ABCA17P-202ENST00000469908 FANCD2Q9BXW9 1451 aa19.56■□□□□ 0.72
ABCA17P-202ENST00000469908 ZNF316A6NFI3 1004 aaPredicted RBP19.54■□□□□ 0.72
ABCA17P-202ENST00000469908 RGL3Q3MIN7 710 aa19.52■□□□□ 0.72
ABCA17P-202ENST00000469908 CEP164Q9UPV0 1460 aa19.5■□□□□ 0.71
ABCA17P-202ENST00000469908 KANK4Q5T7N3 995 aaPredicted RBP19.49■□□□□ 0.71
ABCA17P-202ENST00000469908 JPH4Q96JJ6 628 aa19.49■□□□□ 0.71
ABCA17P-202ENST00000469908 RAD54L2Q9Y4B4 1467 aa19.48■□□□□ 0.71
ABCA17P-202ENST00000469908 EEA1Q15075 1411 aa19.47■□□□□ 0.71
ABCA17P-202ENST00000469908 TNIKQ9UKE5 1360 aa19.45■□□□□ 0.7
ABCA17P-202ENST00000469908 AQRO60306 1485 aaKnown RBP eCLIP19.41■□□□□ 0.7
ABCA17P-202ENST00000469908 NCAPD3P42695 1498 aa19.41■□□□□ 0.7
ABCA17P-202ENST00000469908 CC2D2AQ9P2K1 1620 aa19.4■□□□□ 0.7
ABCA17P-202ENST00000469908 OSCARQ8IYS5 282 aa19.35■□□□□ 0.69
ABCA17P-202ENST00000469908 SLC24A1O60721 1099 aa19.34■□□□□ 0.69
ABCA17P-202ENST00000469908 GGT6Q6P531 493 aa19.33■□□□□ 0.68
ABCA17P-202ENST00000469908 TONSLQ96HA7 1378 aa19.32■□□□□ 0.68
ABCA17P-202ENST00000469908 RAPGEF2Q9Y4G8 1499 aa19.32■□□□□ 0.68
ABCA17P-202ENST00000469908 FHOD3Q2V2M9 1422 aa19.32■□□□□ 0.68
ABCA17P-202ENST00000469908 BICRAQ9NZM4 1560 aa19.32■□□□□ 0.68
ABCA17P-202ENST00000469908 NEFLP07196 543 aa19.29■□□□□ 0.68
ABCA17P-202ENST00000469908 SIN3AQ96ST3 1273 aa19.29■□□□□ 0.68
ABCA17P-202ENST00000469908 SENP3-EIF4A1A0A087X0R7 540 aa19.28■□□□□ 0.68
ABCA17P-202ENST00000469908 FOXD1Q16676 465 aa19.28■□□□□ 0.68
ABCA17P-202ENST00000469908 FGD5Q6ZNL6 1462 aa19.28■□□□□ 0.68
ABCA17P-202ENST00000469908 MIER1Q8N108 512 aa19.27■□□□□ 0.67
ABCA17P-202ENST00000469908 DDX10Q13206 875 aaKnown RBP19.25■□□□□ 0.67
ABCA17P-202ENST00000469908 BCL11AQ9H165 835 aa19.25■□□□□ 0.67
ABCA17P-202ENST00000469908 CCNB3Q8WWL7 1395 aa19.23■□□□□ 0.67
ABCA17P-202ENST00000469908 PPP1R15AO75807 674 aaPredicted RBP19.22■□□□□ 0.67
ABCA17P-202ENST00000469908 HNRNPMP52272 730 aaKnown RBP eCLIP19.22■□□□□ 0.67
ABCA17P-202ENST00000469908 IGF1RP08069 1367 aa19.21■□□□□ 0.67
ABCA17P-202ENST00000469908 SALL2Q9Y467 1007 aaPredicted RBP19.21■□□□□ 0.67
ABCA17P-202ENST00000469908 CARMIL2Q6F5E8 1435 aa19.19■□□□□ 0.66
ABCA17P-202ENST00000469908 C14orf37Q86TY3 774 aa19.16■□□□□ 0.66
ABCA17P-202ENST00000469908 ANP32CO43423 234 aa19.15■□□□□ 0.66
ABCA17P-202ENST00000469908 GAPVD1Q14C86 1478 aa19.15■□□□□ 0.66
ABCA17P-202ENST00000469908 FHAD1B1AJZ9 1412 aa19.1■□□□□ 0.65
ABCA17P-202ENST00000469908 ZBTB7CA1YPR0 619 aa19.09■□□□□ 0.65
ABCA17P-202ENST00000469908 PTPRGP23470 1445 aa19.08■□□□□ 0.65
ABCA17P-202ENST00000469908 CFTRP13569 1480 aa19.08■□□□□ 0.64
ABCA17P-202ENST00000469908 SAFB2Q14151 953 aaKnown RBP eCLIP19.08■□□□□ 0.64
ABCA17P-202ENST00000469908 NUTM2DQ5VT03 806 aaPredicted RBP19.07■□□□□ 0.64
ABCA17P-202ENST00000469908 ERICH6Q7L0X2 663 aa19.07■□□□□ 0.64
ABCA17P-202ENST00000469908 EFCAB2Q5VUJ9 269 aa19.06■□□□□ 0.64
ABCA17P-202ENST00000469908 MYT1Q01538 1121 aa19.06■□□□□ 0.64
ABCA17P-202ENST00000469908 KIF3BO15066 747 aa19.05■□□□□ 0.64
ABCA17P-202ENST00000469908 TMC1Q8TDI8 760 aa19.05■□□□□ 0.64
ABCA17P-202ENST00000469908 VPS8Q8N3P4 1428 aa19.05■□□□□ 0.64
ABCA17P-202ENST00000469908 FAM69CQ0P6D2 419 aa19.03■□□□□ 0.64
ABCA17P-202ENST00000469908 A0A0G2JS52 829 aa19.01■□□□□ 0.63
ABCA17P-202ENST00000469908 ZNF644Q9H582 1327 aaPredicted RBP19■□□□□ 0.63
ABCA17P-202ENST00000469908 FAM9BQ8IZU0 186 aa19■□□□□ 0.63
ABCA17P-202ENST00000469908 LMOD2Q6P5Q4 547 aa18.99■□□□□ 0.63
ABCA17P-202ENST00000469908 DCAF11Q8TEB1 546 aa18.98■□□□□ 0.63
ABCA17P-202ENST00000469908 PKD2Q13563 968 aa18.97■□□□□ 0.63
ABCA17P-202ENST00000469908 FMN1Q68DA7 1419 aa18.94■□□□□ 0.62
ABCA17P-202ENST00000469908 STK26Q9P289 416 aa18.94■□□□□ 0.62
ABCA17P-202ENST00000469908 POLA1P09884 1462 aaPredicted RBP18.93■□□□□ 0.62
ABCA17P-202ENST00000469908 TOPBP1Q92547 1522 aa18.92■□□□□ 0.62
ABCA17P-202ENST00000469908 SYNJ1O43426 1573 aa18.91■□□□□ 0.62
ABCA17P-202ENST00000469908 SOX12O15370 315 aa18.9■□□□□ 0.62
ABCA17P-202ENST00000469908 PPM1GO15355 546 aaPredicted RBP18.9■□□□□ 0.62
ABCA17P-202ENST00000469908 CARD11Q9BXL7 1154 aa18.9■□□□□ 0.62
ABCA17P-202ENST00000469908 SPAG9O60271 1321 aaKnown RBP18.89■□□□□ 0.61
ABCA17P-202ENST00000469908 TNNT2P45379 298 aaPredicted RBP18.89■□□□□ 0.61
ABCA17P-202ENST00000469908 MRC2Q9UBG0 1479 aa18.88■□□□□ 0.61
ABCA17P-202ENST00000469908 EIF4G2P78344 907 aaKnown RBP eCLIP18.87■□□□□ 0.61
ABCA17P-202ENST00000469908 CUX1P39880 1505 aa18.87■□□□□ 0.61
ABCA17P-202ENST00000469908 UNC13AQ9UPW8 1703 aa18.87■□□□□ 0.61
ABCA17P-202ENST00000469908 NUP155O75694 1391 aa18.86■□□□□ 0.61
ABCA17P-202ENST00000469908 AFAP1Q8N556 730 aa18.85■□□□□ 0.61
ABCA17P-202ENST00000469908 ARHGAP35Q9NRY4 1499 aa18.85■□□□□ 0.61
ABCA17P-202ENST00000469908 NUTM2FA1L443 756 aa18.84■□□□□ 0.61
ABCA17P-202ENST00000469908 POGKQ9P215 609 aa18.84■□□□□ 0.61
ABCA17P-202ENST00000469908 HMGXB3Q12766 1538 aa18.82■□□□□ 0.6
ABCA17P-202ENST00000469908 FKBP8Q14318 412 aa18.82■□□□□ 0.6
ABCA17P-202ENST00000469908 WASHC2CQ9Y4E1 1318 aa18.82■□□□□ 0.6
ABCA17P-202ENST00000469908 NEFMP07197 916 aa18.82■□□□□ 0.6
ABCA17P-202ENST00000469908 PRG4Q92954 1404 aaPredicted RBP18.82■□□□□ 0.6
ABCA17P-202ENST00000469908 GRIN2BQ13224 1484 aa18.81■□□□□ 0.6
ABCA17P-202ENST00000469908 HNRNPUQ00839 825 aaKnown RBP eCLIP18.79■□□□□ 0.6
ABCA17P-202ENST00000469908 ZNF608Q9ULD9 1512 aaPredicted RBP18.79■□□□□ 0.6
ABCA17P-202ENST00000469908 MPHOSPH9Q99550 1183 aa18.79■□□□□ 0.6
ABCA17P-202ENST00000469908 SNAPC4Q5SXM2 1469 aa18.78■□□□□ 0.6
ABCA17P-202ENST00000469908 CLSPNQ9HAW4 1339 aa18.77■□□□□ 0.59
ABCA17P-202ENST00000469908 HAP1P54257 671 aaPredicted RBP18.77■□□□□ 0.59
ABCA17P-202ENST00000469908 RAB3GAP2Q9H2M9 1393 aa18.75■□□□□ 0.59
ABCA17P-202ENST00000469908 MRS2Q9HD23 443 aa18.75■□□□□ 0.59
ABCA17P-202ENST00000469908 RAPGEF3O95398 923 aa18.74■□□□□ 0.59
ABCA17P-202ENST00000469908 CANXP27824 592 aaKnown RBP18.71■□□□□ 0.59
ABCA17P-202ENST00000469908 KANK1Q14678 1352 aa18.7■□□□□ 0.58
ABCA17P-202ENST00000469908 IFT140Q96RY7 1462 aa18.68■□□□□ 0.58
ABCA17P-202ENST00000469908 SETD5Q9C0A6 1442 aa18.68■□□□□ 0.58
ABCA17P-202ENST00000469908 NEUROD2Q15784 382 aa18.68■□□□□ 0.58
ABCA17P-202ENST00000469908 URB2Q14146 1524 aaKnown RBP18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms