RNA–Protein interactions for RNA: ENST00000469601.1

RTN4R-205, Transcript of reticulon 4 receptor, humanhuman

TSL 3

Gene RTN4R, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-205ENST00000469601 PRG4Q92954 1404 aaPredicted RBP36.32■■■■□ 3.4
RTN4R-205ENST00000469601 RUSC2Q8N2Y8 1516 aa36.31■■■■□ 3.4
RTN4R-205ENST00000469601 KIAA0586Q9BVV6 1533 aa36.29■■■■□ 3.4
RTN4R-205ENST00000469601 TRHP20396 242 aaPredicted RBP36.28■■■■□ 3.4
RTN4R-205ENST00000469601 RAPGEF2Q9Y4G8 1499 aa36.09■■■■□ 3.37
RTN4R-205ENST00000469601 IQGAP2Q13576 1575 aa35.97■■■■□ 3.35
RTN4R-205ENST00000469601 CARMIL2Q6F5E8 1435 aa35.96■■■■□ 3.35
RTN4R-205ENST00000469601 NPM1P06748 294 aaKnown RBP eCLIP35.89■■■■□ 3.34
RTN4R-205ENST00000469601 PTPRGP23470 1445 aa35.86■■■■□ 3.33
RTN4R-205ENST00000469601 TNIKQ9UKE5 1360 aa35.85■■■■□ 3.33
RTN4R-205ENST00000469601 PRXQ9BXM0 1461 aa35.83■■■■□ 3.33
RTN4R-205ENST00000469601 UGGT2Q9NYU1 1516 aa35.77■■■■□ 3.32
RTN4R-205ENST00000469601 CSRNP3Q8WYN3 585 aa35.74■■■■□ 3.31
RTN4R-205ENST00000469601 ADCY10Q96PN6 1610 aa35.74■■■■□ 3.31
RTN4R-205ENST00000469601 DISP1Q96F81 1524 aa35.73■■■■□ 3.31
RTN4R-205ENST00000469601 EEA1Q15075 1411 aa35.73■■■■□ 3.31
RTN4R-205ENST00000469601 TTBK1Q5TCY1 1321 aaPredicted RBP35.72■■■■□ 3.31
RTN4R-205ENST00000469601 MAPKBP1O60336 1514 aa35.67■■■■□ 3.3
RTN4R-205ENST00000469601 CTTNBP2Q8WZ74 1663 aa35.63■■■■□ 3.29
RTN4R-205ENST00000469601 GOLGA3Q08378 1498 aa35.61■■■■□ 3.29
RTN4R-205ENST00000469601 KIAA0556O60303 1618 aa35.6■■■■□ 3.29
RTN4R-205ENST00000469601 UACAQ9BZF9 1416 aa35.59■■■■□ 3.29
RTN4R-205ENST00000469601 UHRF1BP1LA0JNW5 1464 aa35.58■■■■□ 3.29
RTN4R-205ENST00000469601 ABCC10Q5T3U5 1492 aa35.58■■■■□ 3.29
RTN4R-205ENST00000469601 ABCC2Q92887 1545 aa35.57■■■■□ 3.29
RTN4R-205ENST00000469601 FAM69CQ0P6D2 419 aa35.56■■■■□ 3.28
RTN4R-205ENST00000469601 CHIC1Q5VXU3 224 aa35.5■■■■□ 3.27
RTN4R-205ENST00000469601 KIF13AQ9H1H9 1805 aa35.47■■■■□ 3.27
RTN4R-205ENST00000469601 FAM9AQ8IZU1 332 aaPredicted RBP35.45■■■■□ 3.27
RTN4R-205ENST00000469601 DIP2BQ9P265 1576 aa35.44■■■■□ 3.26
RTN4R-205ENST00000469601 PLB1Q6P1J6 1458 aa35.41■■■■□ 3.26
RTN4R-205ENST00000469601 KDM5BQ9UGL1 1544 aa35.39■■■■□ 3.26
RTN4R-205ENST00000469601 ASXL2Q76L83 1435 aa35.38■■■■□ 3.25
RTN4R-205ENST00000469601 KIF21BO75037 1637 aa35.28■■■■□ 3.24
RTN4R-205ENST00000469601 ABCA8O94911 1581 aa35.25■■■■□ 3.23
RTN4R-205ENST00000469601 P3H3Q8IVL6 736 aa35.25■■■■□ 3.23
RTN4R-205ENST00000469601 ZCCHC11Q5TAX3 1644 aaKnown RBP35.24■■■■□ 3.23
RTN4R-205ENST00000469601 GLI2P10070 1586 aa35.21■■■■□ 3.23
RTN4R-205ENST00000469601 SAMD9Q5K651 1589 aa35.21■■■■□ 3.23
RTN4R-205ENST00000469601 EPRSP07814 1512 aaKnown RBP35.16■■■■□ 3.22
RTN4R-205ENST00000469601 RANGAP1P46060 587 aaPredicted RBP35.14■■■■□ 3.22
RTN4R-205ENST00000469601 WDR7Q9Y4E6 1490 aa35.14■■■■□ 3.22
RTN4R-205ENST00000469601 UBTFP17480 764 aaKnown RBP35.09■■■■□ 3.21
RTN4R-205ENST00000469601 TSPOAP1O95153 1857 aa35.05■■■■□ 3.2
RTN4R-205ENST00000469601 EFCAB5A4FU69 1503 aa35.04■■■■□ 3.2
RTN4R-205ENST00000469601 KDM6BO15054 1643 aa35.02■■■■□ 3.2
RTN4R-205ENST00000469601 FHOD3Q2V2M9 1422 aa35.01■■■■□ 3.2
RTN4R-205ENST00000469601 ATP10BO94823 1461 aa34.99■■■■□ 3.19
RTN4R-205ENST00000469601 EHMT2Q96KQ7 1210 aa34.99■■■■□ 3.19
RTN4R-205ENST00000469601 TEX14Q8IWB6 1497 aa34.98■■■■□ 3.19
RTN4R-205ENST00000469601 KCNH8Q96L42 1107 aa34.98■■■■□ 3.19
RTN4R-205ENST00000469601 MAP3K4Q9Y6R4 1608 aa34.98■■■■□ 3.19
RTN4R-205ENST00000469601 RAPGEF6Q8TEU7 1601 aa34.97■■■■□ 3.19
RTN4R-205ENST00000469601 ARID3CA6NKF2 412 aa34.96■■■■□ 3.19
RTN4R-205ENST00000469601 PPRC1Q5VV67 1664 aaKnown RBP34.92■■■■□ 3.18
RTN4R-205ENST00000469601 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.89■■■■□ 3.18
RTN4R-205ENST00000469601 HNRNPUL2Q1KMD3 747 aaKnown RBP34.89■■■■□ 3.18
RTN4R-205ENST00000469601 CD109Q6YHK3 1445 aa34.89■■■■□ 3.18
RTN4R-205ENST00000469601 NUP153P49790 1475 aaKnown RBP34.86■■■■□ 3.17
RTN4R-205ENST00000469601 AEBP2Q6ZN18 517 aaPredicted RBP34.83■■■■□ 3.17
RTN4R-205ENST00000469601 MAGI3Q5TCQ9 1506 aa34.82■■■■□ 3.16
RTN4R-205ENST00000469601 CFAP43Q8NDM7 1665 aa34.82■■■■□ 3.16
RTN4R-205ENST00000469601 FMN1Q68DA7 1419 aa34.77■■■■□ 3.16
RTN4R-205ENST00000469601 ARHGAP35Q9NRY4 1499 aa34.75■■■■□ 3.15
RTN4R-205ENST00000469601 PLEKHD1A6NEE1 506 aa34.74■■■■□ 3.15
RTN4R-205ENST00000469601 COL17A1Q9UMD9 1497 aaPredicted RBP34.71■■■■□ 3.15
RTN4R-205ENST00000469601 ABCA9Q8IUA7 1624 aa34.67■■■■□ 3.14
RTN4R-205ENST00000469601 PHLDB1Q86UU1 1377 aa34.63■■■■□ 3.13
RTN4R-205ENST00000469601 ATP1B4Q9UN42 357 aaPredicted RBP34.61■■■■□ 3.13
RTN4R-205ENST00000469601 HECW1Q76N89 1606 aa34.58■■■■□ 3.13
RTN4R-205ENST00000469601 CDK11AQ9UQ88 783 aaPredicted RBP34.55■■■■□ 3.12
RTN4R-205ENST00000469601 CDK13Q14004 1512 aaKnown RBP34.54■■■■□ 3.12
RTN4R-205ENST00000469601 ARAP3Q8WWN8 1544 aa34.54■■■■□ 3.12
RTN4R-205ENST00000469601 NEO1Q92859 1461 aa34.52■■■■□ 3.12
RTN4R-205ENST00000469601 CLIP1P30622 1438 aa34.45■■■■□ 3.11
RTN4R-205ENST00000469601 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.44■■■■□ 3.16e-6■■■■■ 38.2
RTN4R-205ENST00000469601 KDM4FA0A1W2PPD8 638 aa34.43■■■■□ 3.1
RTN4R-205ENST00000469601 CASKIN1Q8WXD9 1431 aa34.41■■■■□ 3.1
RTN4R-205ENST00000469601 FANCAO15360 1455 aa34.35■■■■□ 3.09
RTN4R-205ENST00000469601 CCDC18Q5T9S5 1454 aa34.34■■■■□ 3.09
RTN4R-205ENST00000469601 TROQ12816 1431 aaPredicted RBP34.34■■■■□ 3.09
RTN4R-205ENST00000469601 TTC37Q6PGP7 1564 aa34.34■■■■□ 3.09
RTN4R-205ENST00000469601 RAPGEF3O95398 923 aa34.33■■■■□ 3.09
RTN4R-205ENST00000469601 CFAP74Q9C0B2 1584 aa34.32■■■■□ 3.09
RTN4R-205ENST00000469601 AKNAQ7Z591 1439 aa34.32■■■■□ 3.08
RTN4R-205ENST00000469601 PCF11O94913 1555 aaKnown RBP34.31■■■■□ 3.08
RTN4R-205ENST00000469601 ADGRL1O94910 1474 aa34.3■■■■□ 3.08
RTN4R-205ENST00000469601 FYCO1Q9BQS8 1478 aa34.3■■■■□ 3.08
RTN4R-205ENST00000469601 PLCH2O75038 1416 aa34.3■■■■□ 3.08
RTN4R-205ENST00000469601 DENND4BO75064 1496 aaPredicted RBP34.27■■■■□ 3.08
RTN4R-205ENST00000469601 KIF14Q15058 1648 aa34.26■■■■□ 3.07
RTN4R-205ENST00000469601 EFCAB2Q5VUJ9 269 aa34.22■■■■□ 3.07
RTN4R-205ENST00000469601 LRRIQ1Q96JM4 1722 aa34.19■■■■□ 3.06
RTN4R-205ENST00000469601 FRMPD1Q5SYB0 1578 aa34.17■■■■□ 3.06
RTN4R-205ENST00000469601 CEP162Q5TB80 1403 aa34.17■■■■□ 3.06
RTN4R-205ENST00000469601 MYO5CQ9NQX4 1742 aa34.13■■■■□ 3.05
RTN4R-205ENST00000469601 SCAPERQ9BY12 1400 aa34.12■■■■□ 3.05
RTN4R-205ENST00000469601 RICTORQ6R327 1708 aa34.08■■■■□ 3.05
RTN4R-205ENST00000469601 ARHGAP5Q13017 1502 aa34.08■■■■□ 3.05
RTN4R-205ENST00000469601 POGZQ7Z3K3 1410 aa34.06■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms