RNA–Protein interactions for RNA: ENST00000469565.6

LMNA-210, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-210ENST00000469565 CARMIL1Q5VZK9 1371 aa22.58■■□□□ 1.21
LMNA-210ENST00000469565 ERCC6L2Q5T890 1561 aa22.52■■□□□ 1.2
LMNA-210ENST00000469565 GRIN2AQ12879 1464 aa22.51■■□□□ 1.19
LMNA-210ENST00000469565 CEP170Q5SW79 1584 aa22.47■■□□□ 1.19
LMNA-210ENST00000469565 RAPGEF2Q9Y4G8 1499 aa22.47■■□□□ 1.19
LMNA-210ENST00000469565 EHMT2Q96KQ7 1210 aa22.45■■□□□ 1.18
LMNA-210ENST00000469565 NUP160Q12769 1436 aa22.44■■□□□ 1.18
LMNA-210ENST00000469565 PRXQ9BXM0 1461 aa22.42■■□□□ 1.18
LMNA-210ENST00000469565 SHROOM2Q13796 1616 aa22.39■■□□□ 1.17
LMNA-210ENST00000469565 KIF13AQ9H1H9 1805 aa22.38■■□□□ 1.17
LMNA-210ENST00000469565 KIF21BO75037 1637 aa22.34■■□□□ 1.17
LMNA-210ENST00000469565 UBTFP17480 764 aaKnown RBP22.29■■□□□ 1.16
LMNA-210ENST00000469565 PRG4Q92954 1404 aaPredicted RBP22.29■■□□□ 1.16
LMNA-210ENST00000469565 FAM69CQ0P6D2 419 aa22.27■■□□□ 1.16
LMNA-210ENST00000469565 CTTNBP2Q8WZ74 1663 aa22.26■■□□□ 1.15
LMNA-210ENST00000469565 KIAA0586Q9BVV6 1533 aa22.26■■□□□ 1.15
LMNA-210ENST00000469565 JPH4Q96JJ6 628 aa22.26■■□□□ 1.15
LMNA-210ENST00000469565 GOLGA3Q08378 1498 aa22.26■■□□□ 1.15
LMNA-210ENST00000469565 NPM1P06748 294 aaKnown RBP eCLIP22.25■■□□□ 1.15
LMNA-210ENST00000469565 ABCC10Q5T3U5 1492 aa22.22■■□□□ 1.15
LMNA-210ENST00000469565 IQGAP2Q13576 1575 aa22.21■■□□□ 1.15
LMNA-210ENST00000469565 RANGAP1P46060 587 aaPredicted RBP22.19■■□□□ 1.14
LMNA-210ENST00000469565 LOC105371045A0A1W2PR82 267 aa22.16■■□□□ 1.14
LMNA-210ENST00000469565 MAPKBP1O60336 1514 aa22.16■■□□□ 1.14
LMNA-210ENST00000469565 DIP2BQ9P265 1576 aa22.12■■□□□ 1.13
LMNA-210ENST00000469565 KDM4FA0A1W2PPD8 638 aa22.12■■□□□ 1.13
LMNA-210ENST00000469565 KDM6BO15054 1643 aa22.1■■□□□ 1.13
LMNA-210ENST00000469565 ADCY10Q96PN6 1610 aa22.07■■□□□ 1.12
LMNA-210ENST00000469565 TTBK1Q5TCY1 1321 aaPredicted RBP22.06■■□□□ 1.12
LMNA-210ENST00000469565 UGGT2Q9NYU1 1516 aa22.06■■□□□ 1.12
LMNA-210ENST00000469565 CARMIL2Q6F5E8 1435 aa22.06■■□□□ 1.12
LMNA-210ENST00000469565 P3H3Q8IVL6 736 aa22.04■■□□□ 1.12
LMNA-210ENST00000469565 TSPOAP1O95153 1857 aa22.03■■□□□ 1.12
LMNA-210ENST00000469565 TNIKQ9UKE5 1360 aa22.03■■□□□ 1.12
LMNA-210ENST00000469565 ILDR1Q86SU0 546 aaPredicted RBP22■■□□□ 1.11
LMNA-210ENST00000469565 DISP1Q96F81 1524 aa22■■□□□ 1.11
LMNA-210ENST00000469565 KIAA0556O60303 1618 aa21.98■■□□□ 1.11
LMNA-210ENST00000469565 SAMD9Q5K651 1589 aa21.92■■□□□ 1.1
LMNA-210ENST00000469565 PTPRGP23470 1445 aa21.92■■□□□ 1.1
LMNA-210ENST00000469565 EFCAB5A4FU69 1503 aa21.9■■□□□ 1.1
LMNA-210ENST00000469565 CLIP1P30622 1438 aa21.89■■□□□ 1.09
LMNA-210ENST00000469565 FHOD3Q2V2M9 1422 aa21.89■■□□□ 1.09
LMNA-210ENST00000469565 ARHGAP35Q9NRY4 1499 aa21.87■■□□□ 1.09
LMNA-210ENST00000469565 CEP162Q5TB80 1403 aa21.86■■□□□ 1.09
LMNA-210ENST00000469565 ABCC2Q92887 1545 aa21.81■■□□□ 1.08
LMNA-210ENST00000469565 GLI2P10070 1586 aa21.8■■□□□ 1.08
LMNA-210ENST00000469565 ADGRL1O94910 1474 aa21.8■■□□□ 1.08
LMNA-210ENST00000469565 PLB1Q6P1J6 1458 aa21.8■■□□□ 1.08
LMNA-210ENST00000469565 ASXL2Q76L83 1435 aa21.8■■□□□ 1.08
LMNA-210ENST00000469565 PPRC1Q5VV67 1664 aaKnown RBP21.78■■□□□ 1.08
LMNA-210ENST00000469565 UACAQ9BZF9 1416 aa21.76■■□□□ 1.07
LMNA-210ENST00000469565 ATP1B4Q9UN42 357 aaPredicted RBP21.75■■□□□ 1.07
LMNA-210ENST00000469565 FMN1Q68DA7 1419 aa21.72■■□□□ 1.07
LMNA-210ENST00000469565 UHRF1BP1LA0JNW5 1464 aa21.71■■□□□ 1.07
LMNA-210ENST00000469565 RAPGEF6Q8TEU7 1601 aa21.71■■□□□ 1.07
LMNA-210ENST00000469565 ARID3CA6NKF2 412 aa21.71■■□□□ 1.07
LMNA-210ENST00000469565 ABCA8O94911 1581 aa21.7■■□□□ 1.06
LMNA-210ENST00000469565 COL17A1Q9UMD9 1497 aaPredicted RBP21.68■■□□□ 1.06
LMNA-210ENST00000469565 HECW2Q9P2P5 1572 aa21.66■■□□□ 1.06
LMNA-210ENST00000469565 TEX14Q8IWB6 1497 aa21.66■■□□□ 1.06
LMNA-210ENST00000469565 MAP3K4Q9Y6R4 1608 aa21.66■■□□□ 1.06
LMNA-210ENST00000469565 EPRSP07814 1512 aaKnown RBP21.65■■□□□ 1.06
LMNA-210ENST00000469565 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.65■■□□□ 1.06
LMNA-210ENST00000469565 HNRNPUL2Q1KMD3 747 aaKnown RBP21.65■■□□□ 1.06
LMNA-210ENST00000469565 KDM5BQ9UGL1 1544 aa21.62■■□□□ 1.05
LMNA-210ENST00000469565 PCF11O94913 1555 aaKnown RBP21.61■■□□□ 1.05
LMNA-210ENST00000469565 ZCCHC11Q5TAX3 1644 aaKnown RBP21.59■■□□□ 1.05
LMNA-210ENST00000469565 HECW1Q76N89 1606 aa21.58■■□□□ 1.05
LMNA-210ENST00000469565 NUP153P49790 1475 aaKnown RBP21.58■■□□□ 1.05
LMNA-210ENST00000469565 CASKIN1Q8WXD9 1431 aa21.58■■□□□ 1.05
LMNA-210ENST00000469565 ATP10BO94823 1461 aa21.57■■□□□ 1.04
LMNA-210ENST00000469565 VPS8Q8N3P4 1428 aa21.55■■□□□ 1.04
LMNA-210ENST00000469565 FYCO1Q9BQS8 1478 aa21.53■■□□□ 1.04
LMNA-210ENST00000469565 LRRIQ1Q96JM4 1722 aa21.53■■□□□ 1.04
LMNA-210ENST00000469565 CDK13Q14004 1512 aaKnown RBP21.52■■□□□ 1.04
LMNA-210ENST00000469565 WDR7Q9Y4E6 1490 aa21.49■■□□□ 1.03
LMNA-210ENST00000469565 PLEKHD1A6NEE1 506 aa21.47■■□□□ 1.03
LMNA-210ENST00000469565 KCNH8Q96L42 1107 aa21.47■■□□□ 1.03
LMNA-210ENST00000469565 CCDC18Q5T9S5 1454 aa21.46■■□□□ 1.03
LMNA-210ENST00000469565 APLP2Q06481 763 aa21.45■■□□□ 1.02
LMNA-210ENST00000469565 CDK11AQ9UQ88 783 aaPredicted RBP21.45■■□□□ 1.02
LMNA-210ENST00000469565 CD109Q6YHK3 1445 aa21.45■■□□□ 1.02
LMNA-210ENST00000469565 MAGI3Q5TCQ9 1506 aa21.44■■□□□ 1.02
LMNA-210ENST00000469565 CFAP43Q8NDM7 1665 aa21.42■■□□□ 1.02
LMNA-210ENST00000469565 FBXO41Q8TF61 875 aa21.42■■□□□ 1.02
LMNA-210ENST00000469565 TIAM1Q13009 1591 aa21.34■■□□□ 1.01
LMNA-210ENST00000469565 MTUS2Q5JR59 1369 aa21.34■■□□□ 1.01
LMNA-210ENST00000469565 TROQ12816 1431 aaPredicted RBP21.33■■□□□ 1.01
LMNA-210ENST00000469565 ARAP3Q8WWN8 1544 aa21.29■■□□□ 1
LMNA-210ENST00000469565 KANK4Q5T7N3 995 aaPredicted RBP21.28■■□□□ 1
LMNA-210ENST00000469565 MAP3K1Q13233 1512 aa21.28■■□□□ 1
LMNA-210ENST00000469565 KIF14Q15058 1648 aa21.27■■□□□ 1
LMNA-210ENST00000469565 EHBP1L1Q8N3D4 1523 aa21.25■□□□□ 0.99
LMNA-210ENST00000469565 PPARGC1BQ86YN6 1023 aaKnown RBP21.24■□□□□ 0.99
LMNA-210ENST00000469565 PTPRMP28827 1452 aa21.24■□□□□ 0.99
LMNA-210ENST00000469565 LRRC9Q6ZRR7 1453 aa21.24■□□□□ 0.99
LMNA-210ENST00000469565 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.23■□□□□ 0.993e-14■■□□□ 12.5
LMNA-210ENST00000469565 PHLDB1Q86UU1 1377 aa21.23■□□□□ 0.99
LMNA-210ENST00000469565 ABCA9Q8IUA7 1624 aa21.22■□□□□ 0.99
LMNA-210ENST00000469565 ADAMTSL3P82987 1691 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms