RNA–Protein interactions for RNA: ENST00000469443.2

PHGDH-204, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-204ENST00000469443 JPH4Q96JJ6 628 aa31.29■■■□□ 2.6
PHGDH-204ENST00000469443 PRG4Q92954 1404 aaPredicted RBP31.28■■■□□ 2.6
PHGDH-204ENST00000469443 KIAA0586Q9BVV6 1533 aa31.25■■■□□ 2.59
PHGDH-204ENST00000469443 TRHP20396 242 aaPredicted RBP31.17■■■□□ 2.58
PHGDH-204ENST00000469443 RAPGEF2Q9Y4G8 1499 aa31.1■■■□□ 2.57
PHGDH-204ENST00000469443 IQGAP2Q13576 1575 aa31.07■■■□□ 2.56
PHGDH-204ENST00000469443 CTTNBP2Q8WZ74 1663 aa30.94■■■□□ 2.54
PHGDH-204ENST00000469443 CARMIL2Q6F5E8 1435 aa30.93■■■□□ 2.54
PHGDH-204ENST00000469443 ADCY10Q96PN6 1610 aa30.91■■■□□ 2.54
PHGDH-204ENST00000469443 PRXQ9BXM0 1461 aa30.9■■■□□ 2.54
PHGDH-204ENST00000469443 UGGT2Q9NYU1 1516 aa30.87■■■□□ 2.53
PHGDH-204ENST00000469443 TNIKQ9UKE5 1360 aa30.85■■■□□ 2.53
PHGDH-204ENST00000469443 DISP1Q96F81 1524 aa30.84■■■□□ 2.53
PHGDH-204ENST00000469443 PTPRGP23470 1445 aa30.84■■■□□ 2.53
PHGDH-204ENST00000469443 KIF13AQ9H1H9 1805 aa30.82■■■□□ 2.52
PHGDH-204ENST00000469443 NPM1P06748 294 aaKnown RBP eCLIP30.79■■■□□ 2.52
PHGDH-204ENST00000469443 KIAA0556O60303 1618 aa30.78■■■□□ 2.52
PHGDH-204ENST00000469443 MAPKBP1O60336 1514 aa30.78■■■□□ 2.52
PHGDH-204ENST00000469443 EEA1Q15075 1411 aa30.76■■■□□ 2.51
PHGDH-204ENST00000469443 CSRNP3Q8WYN3 585 aa30.75■■■□□ 2.51
PHGDH-204ENST00000469443 TTBK1Q5TCY1 1321 aaPredicted RBP30.74■■■□□ 2.51
PHGDH-204ENST00000469443 UHRF1BP1LA0JNW5 1464 aa30.66■■■□□ 2.5
PHGDH-204ENST00000469443 GOLGA3Q08378 1498 aa30.66■■■□□ 2.5
PHGDH-204ENST00000469443 ABCC10Q5T3U5 1492 aa30.66■■■□□ 2.5
PHGDH-204ENST00000469443 ABCC2Q92887 1545 aa30.65■■■□□ 2.5
PHGDH-204ENST00000469443 UACAQ9BZF9 1416 aa30.64■■■□□ 2.5
PHGDH-204ENST00000469443 DIP2BQ9P265 1576 aa30.64■■■□□ 2.5
PHGDH-204ENST00000469443 CHIC1Q5VXU3 224 aa30.6■■■□□ 2.49
PHGDH-204ENST00000469443 FAM69CQ0P6D2 419 aa30.56■■■□□ 2.48
PHGDH-204ENST00000469443 FAM9AQ8IZU1 332 aaPredicted RBP30.55■■■□□ 2.48
PHGDH-204ENST00000469443 KIF21BO75037 1637 aa30.52■■■□□ 2.48
PHGDH-204ENST00000469443 KDM5BQ9UGL1 1544 aa30.52■■■□□ 2.48
PHGDH-204ENST00000469443 ZCCHC11Q5TAX3 1644 aaKnown RBP30.51■■■□□ 2.47
PHGDH-204ENST00000469443 PLB1Q6P1J6 1458 aa30.48■■■□□ 2.47
PHGDH-204ENST00000469443 ASXL2Q76L83 1435 aa30.47■■■□□ 2.47
PHGDH-204ENST00000469443 TSPOAP1O95153 1857 aa30.46■■■□□ 2.47
PHGDH-204ENST00000469443 SAMD9Q5K651 1589 aa30.46■■■□□ 2.47
PHGDH-204ENST00000469443 ABCA8O94911 1581 aa30.45■■■□□ 2.47
PHGDH-204ENST00000469443 GLI2P10070 1586 aa30.39■■■□□ 2.46
PHGDH-204ENST00000469443 P3H3Q8IVL6 736 aa30.36■■■□□ 2.45
PHGDH-204ENST00000469443 EPRSP07814 1512 aaKnown RBP30.32■■■□□ 2.44
PHGDH-204ENST00000469443 PPRC1Q5VV67 1664 aaKnown RBP30.3■■■□□ 2.44
PHGDH-204ENST00000469443 WDR7Q9Y4E6 1490 aa30.27■■■□□ 2.44
PHGDH-204ENST00000469443 MAP3K4Q9Y6R4 1608 aa30.26■■■□□ 2.44
PHGDH-204ENST00000469443 RANGAP1P46060 587 aaPredicted RBP30.25■■■□□ 2.43
PHGDH-204ENST00000469443 KDM6BO15054 1643 aa30.25■■■□□ 2.43
PHGDH-204ENST00000469443 RAPGEF6Q8TEU7 1601 aa30.25■■■□□ 2.43
PHGDH-204ENST00000469443 EFCAB5A4FU69 1503 aa30.24■■■□□ 2.43
PHGDH-204ENST00000469443 FHOD3Q2V2M9 1422 aa30.2■■■□□ 2.42
PHGDH-204ENST00000469443 UBTFP17480 764 aaKnown RBP30.17■■■□□ 2.42
PHGDH-204ENST00000469443 EHMT2Q96KQ7 1210 aa30.17■■■□□ 2.42
PHGDH-204ENST00000469443 ATP10BO94823 1461 aa30.17■■■□□ 2.42
PHGDH-204ENST00000469443 CFAP43Q8NDM7 1665 aa30.14■■■□□ 2.42
PHGDH-204ENST00000469443 ARID3CA6NKF2 412 aa30.11■■■□□ 2.41
PHGDH-204ENST00000469443 TEX14Q8IWB6 1497 aa30.1■■■□□ 2.41
PHGDH-204ENST00000469443 KCNH8Q96L42 1107 aa30.09■■■□□ 2.41
PHGDH-204ENST00000469443 NUP153P49790 1475 aaKnown RBP30.08■■■□□ 2.41
PHGDH-204ENST00000469443 CD109Q6YHK3 1445 aa30.03■■■□□ 2.4
PHGDH-204ENST00000469443 MAGI3Q5TCQ9 1506 aa30.01■■■□□ 2.39
PHGDH-204ENST00000469443 ARHGAP35Q9NRY4 1499 aa30■■■□□ 2.39
PHGDH-204ENST00000469443 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.98■■■□□ 2.39
PHGDH-204ENST00000469443 HNRNPUL2Q1KMD3 747 aaKnown RBP29.98■■■□□ 2.39
PHGDH-204ENST00000469443 ABCA9Q8IUA7 1624 aa29.97■■■□□ 2.39
PHGDH-204ENST00000469443 COL17A1Q9UMD9 1497 aaPredicted RBP29.94■■■□□ 2.38
PHGDH-204ENST00000469443 FMN1Q68DA7 1419 aa29.93■■■□□ 2.38
PHGDH-204ENST00000469443 HECW1Q76N89 1606 aa29.88■■■□□ 2.37
PHGDH-204ENST00000469443 AEBP2Q6ZN18 517 aaPredicted RBP29.87■■■□□ 2.37
PHGDH-204ENST00000469443 PLEKHD1A6NEE1 506 aa29.85■■■□□ 2.37
PHGDH-204ENST00000469443 CDK13Q14004 1512 aaKnown RBP29.85■■■□□ 2.37
PHGDH-204ENST00000469443 LRRIQ1Q96JM4 1722 aa29.76■■■□□ 2.36
PHGDH-204ENST00000469443 ARAP3Q8WWN8 1544 aa29.76■■■□□ 2.36
PHGDH-204ENST00000469443 ATP1B4Q9UN42 357 aaPredicted RBP29.76■■■□□ 2.35
PHGDH-204ENST00000469443 PHLDB1Q86UU1 1377 aa29.75■■■□□ 2.35
PHGDH-204ENST00000469443 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.74■■■□□ 2.35
PHGDH-204ENST00000469443 NEO1Q92859 1461 aa29.73■■■□□ 2.35
PHGDH-204ENST00000469443 TTC37Q6PGP7 1564 aa29.72■■■□□ 2.35
PHGDH-204ENST00000469443 PCF11O94913 1555 aaKnown RBP29.7■■■□□ 2.35
PHGDH-204ENST00000469443 CLIP1P30622 1438 aa29.69■■■□□ 2.34
PHGDH-204ENST00000469443 CFAP74Q9C0B2 1584 aa29.66■■■□□ 2.34
PHGDH-204ENST00000469443 CASKIN1Q8WXD9 1431 aa29.65■■■□□ 2.34
PHGDH-204ENST00000469443 CDK11AQ9UQ88 783 aaPredicted RBP29.65■■■□□ 2.34
PHGDH-204ENST00000469443 KDM4FA0A1W2PPD8 638 aa29.64■■■□□ 2.34
PHGDH-204ENST00000469443 MYO5CQ9NQX4 1742 aa29.6■■■□□ 2.33
PHGDH-204ENST00000469443 CCDC18Q5T9S5 1454 aa29.6■■■□□ 2.33
PHGDH-204ENST00000469443 TROQ12816 1431 aaPredicted RBP29.59■■■□□ 2.33
PHGDH-204ENST00000469443 FANCAO15360 1455 aa29.59■■■□□ 2.33
PHGDH-204ENST00000469443 FYCO1Q9BQS8 1478 aa29.59■■■□□ 2.33
PHGDH-204ENST00000469443 KIF14Q15058 1648 aa29.59■■■□□ 2.33
PHGDH-204ENST00000469443 FRMPD1Q5SYB0 1578 aa29.57■■■□□ 2.32
PHGDH-204ENST00000469443 ADGRL1O94910 1474 aa29.57■■■□□ 2.32
PHGDH-204ENST00000469443 AKNAQ7Z591 1439 aa29.56■■■□□ 2.32
PHGDH-204ENST00000469443 RICTORQ6R327 1708 aa29.55■■■□□ 2.32
PHGDH-204ENST00000469443 RAPGEF3O95398 923 aa29.54■■■□□ 2.32
PHGDH-204ENST00000469443 PLCH2O75038 1416 aa29.53■■■□□ 2.32
PHGDH-204ENST00000469443 DENND4BO75064 1496 aaPredicted RBP29.5■■■□□ 2.31
PHGDH-204ENST00000469443 CEP162Q5TB80 1403 aa29.48■■■□□ 2.31
PHGDH-204ENST00000469443 CDC42BPBQ9Y5S2 1711 aa29.42■■■□□ 2.3
PHGDH-204ENST00000469443 ZMYM4Q5VZL5 1548 aa29.4■■■□□ 2.3
PHGDH-204ENST00000469443 EFCAB2Q5VUJ9 269 aa29.4■■■□□ 2.3
PHGDH-204ENST00000469443 ARHGAP5Q13017 1502 aa29.4■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms