RNA–Protein interactions for RNA: ENST00000469028.1

SNU13-206, Transcript of small nuclear ribonucleoprotein 13, humanhuman

TSL 5

Gene SNU13, Length 736 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-206ENST00000469028 ERCC6L2Q5T890 1561 aa18.52■□□□□ 0.56
SNU13-206ENST00000469028 PRXQ9BXM0 1461 aa18.5■□□□□ 0.55
SNU13-206ENST00000469028 KIAA0586Q9BVV6 1533 aa18.49■□□□□ 0.55
SNU13-206ENST00000469028 EEA1Q15075 1411 aa18.47■□□□□ 0.55
SNU13-206ENST00000469028 CYB5RLQ6IPT4 315 aa18.45■□□□□ 0.54
SNU13-206ENST00000469028 CSRNP3Q8WYN3 585 aa18.45■□□□□ 0.54
SNU13-206ENST00000469028 JPH4Q96JJ6 628 aa18.45■□□□□ 0.54
SNU13-206ENST00000469028 PRG4Q92954 1404 aaPredicted RBP18.43■□□□□ 0.54
SNU13-206ENST00000469028 FAM9AQ8IZU1 332 aaPredicted RBP18.41■□□□□ 0.54
SNU13-206ENST00000469028 IQGAP2Q13576 1575 aa18.4■□□□□ 0.54
SNU13-206ENST00000469028 CTTNBP2Q8WZ74 1663 aa18.35■□□□□ 0.53
SNU13-206ENST00000469028 UGGT2Q9NYU1 1516 aa18.32■□□□□ 0.52
SNU13-206ENST00000469028 KIF21BO75037 1637 aa18.31■□□□□ 0.52
SNU13-206ENST00000469028 DISP1Q96F81 1524 aa18.3■□□□□ 0.52
SNU13-206ENST00000469028 CARMIL2Q6F5E8 1435 aa18.26■□□□□ 0.51
SNU13-206ENST00000469028 KIAA0556O60303 1618 aa18.25■□□□□ 0.51
SNU13-206ENST00000469028 TNIKQ9UKE5 1360 aa18.23■□□□□ 0.51
SNU13-206ENST00000469028 PTPRGP23470 1445 aa18.2■□□□□ 0.5
SNU13-206ENST00000469028 GOLGA3Q08378 1498 aa18.2■□□□□ 0.5
SNU13-206ENST00000469028 ADCY10Q96PN6 1610 aa18.18■□□□□ 0.5
SNU13-206ENST00000469028 EHMT2Q96KQ7 1210 aa18.17■□□□□ 0.5
SNU13-206ENST00000469028 TTBK1Q5TCY1 1321 aaPredicted RBP18.17■□□□□ 0.5
SNU13-206ENST00000469028 SAMD9Q5K651 1589 aa18.15■□□□□ 0.5
SNU13-206ENST00000469028 UACAQ9BZF9 1416 aa18.1■□□□□ 0.49
SNU13-206ENST00000469028 UHRF1BP1LA0JNW5 1464 aa18.09■□□□□ 0.49
SNU13-206ENST00000469028 UBTFP17480 764 aaKnown RBP18.09■□□□□ 0.49
SNU13-206ENST00000469028 RANGAP1P46060 587 aaPredicted RBP18.08■□□□□ 0.48
SNU13-206ENST00000469028 P3H3Q8IVL6 736 aa18.08■□□□□ 0.48
SNU13-206ENST00000469028 ABCC2Q92887 1545 aa18.08■□□□□ 0.48
SNU13-206ENST00000469028 PLB1Q6P1J6 1458 aa18.07■□□□□ 0.48
SNU13-206ENST00000469028 ABCA8O94911 1581 aa18.05■□□□□ 0.48
SNU13-206ENST00000469028 EFCAB5A4FU69 1503 aa18.04■□□□□ 0.48
SNU13-206ENST00000469028 MAPKBP1O60336 1514 aa18.04■□□□□ 0.48
SNU13-206ENST00000469028 TRHP20396 242 aaPredicted RBP18.04■□□□□ 0.48
SNU13-206ENST00000469028 FHOD3Q2V2M9 1422 aa18.04■□□□□ 0.48
SNU13-206ENST00000469028 NPM1P06748 294 aaKnown RBP eCLIP18.02■□□□□ 0.48
SNU13-206ENST00000469028 KDM5BQ9UGL1 1544 aa18.01■□□□□ 0.47
SNU13-206ENST00000469028 ARHGAP35Q9NRY4 1499 aa17.99■□□□□ 0.47
SNU13-206ENST00000469028 ZCCHC11Q5TAX3 1644 aaKnown RBP17.98■□□□□ 0.47
SNU13-206ENST00000469028 KIF13AQ9H1H9 1805 aa17.95■□□□□ 0.46
SNU13-206ENST00000469028 ABCC10Q5T3U5 1492 aa17.95■□□□□ 0.46
SNU13-206ENST00000469028 RAPGEF6Q8TEU7 1601 aa17.94■□□□□ 0.46
SNU13-206ENST00000469028 ASXL2Q76L83 1435 aa17.94■□□□□ 0.46
SNU13-206ENST00000469028 DIP2BQ9P265 1576 aa17.94■□□□□ 0.46
SNU13-206ENST00000469028 NUP153P49790 1475 aaKnown RBP17.89■□□□□ 0.45
SNU13-206ENST00000469028 ATP10BO94823 1461 aa17.88■□□□□ 0.45
SNU13-206ENST00000469028 ARID3CA6NKF2 412 aa17.88■□□□□ 0.45
SNU13-206ENST00000469028 FAM69CQ0P6D2 419 aa17.88■□□□□ 0.45
SNU13-206ENST00000469028 LOC105371045A0A1W2PR82 267 aa17.86■□□□□ 0.45
SNU13-206ENST00000469028 CLIP1P30622 1438 aa17.86■□□□□ 0.45
SNU13-206ENST00000469028 EPRSP07814 1512 aaKnown RBP17.85■□□□□ 0.45
SNU13-206ENST00000469028 FMN1Q68DA7 1419 aa17.85■□□□□ 0.45
SNU13-206ENST00000469028 WDR7Q9Y4E6 1490 aa17.85■□□□□ 0.45
SNU13-206ENST00000469028 GLI2P10070 1586 aa17.83■□□□□ 0.45
SNU13-206ENST00000469028 CEP162Q5TB80 1403 aa17.81■□□□□ 0.44
SNU13-206ENST00000469028 HECW1Q76N89 1606 aa17.8■□□□□ 0.44
SNU13-206ENST00000469028 CDK13Q14004 1512 aaKnown RBP17.78■□□□□ 0.44
SNU13-206ENST00000469028 PCF11O94913 1555 aaKnown RBP17.78■□□□□ 0.44
SNU13-206ENST00000469028 MAP3K4Q9Y6R4 1608 aa17.76■□□□□ 0.43
SNU13-206ENST00000469028 PPRC1Q5VV67 1664 aaKnown RBP17.75■□□□□ 0.43
SNU13-206ENST00000469028 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.75■□□□□ 0.43
SNU13-206ENST00000469028 HNRNPUL2Q1KMD3 747 aaKnown RBP17.75■□□□□ 0.43
SNU13-206ENST00000469028 TSPOAP1O95153 1857 aa17.75■□□□□ 0.43
SNU13-206ENST00000469028 LRRIQ1Q96JM4 1722 aa17.75■□□□□ 0.43
SNU13-206ENST00000469028 CASKIN1Q8WXD9 1431 aa17.74■□□□□ 0.43
SNU13-206ENST00000469028 KCNH8Q96L42 1107 aa17.74■□□□□ 0.43
SNU13-206ENST00000469028 ATP1B4Q9UN42 357 aaPredicted RBP17.73■□□□□ 0.43
SNU13-206ENST00000469028 FYCO1Q9BQS8 1478 aa17.7■□□□□ 0.42
SNU13-206ENST00000469028 CFAP43Q8NDM7 1665 aa17.7■□□□□ 0.42
SNU13-206ENST00000469028 ABCA9Q8IUA7 1624 aa17.69■□□□□ 0.42
SNU13-206ENST00000469028 PLEKHD1A6NEE1 506 aa17.68■□□□□ 0.42
SNU13-206ENST00000469028 CD109Q6YHK3 1445 aa17.67■□□□□ 0.42
SNU13-206ENST00000469028 CCDC18Q5T9S5 1454 aa17.65■□□□□ 0.42
SNU13-206ENST00000469028 MAGI3Q5TCQ9 1506 aa17.65■□□□□ 0.42
SNU13-206ENST00000469028 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.63■□□□□ 0.418e-9■■■■■ 57.3
SNU13-206ENST00000469028 TEX14Q8IWB6 1497 aa17.63■□□□□ 0.41
SNU13-206ENST00000469028 KDM6BO15054 1643 aa17.62■□□□□ 0.41
SNU13-206ENST00000469028 TTC37Q6PGP7 1564 aa17.62■□□□□ 0.41
SNU13-206ENST00000469028 TROQ12816 1431 aaPredicted RBP17.61■□□□□ 0.41
SNU13-206ENST00000469028 KIF14Q15058 1648 aa17.6■□□□□ 0.41
SNU13-206ENST00000469028 COL17A1Q9UMD9 1497 aaPredicted RBP17.59■□□□□ 0.41
SNU13-206ENST00000469028 VPS8Q8N3P4 1428 aa17.59■□□□□ 0.41
SNU13-206ENST00000469028 CDK11AQ9UQ88 783 aaPredicted RBP17.59■□□□□ 0.41
SNU13-206ENST00000469028 NEO1Q92859 1461 aa17.51■□□□□ 0.39
SNU13-206ENST00000469028 PLCH2O75038 1416 aa17.5■□□□□ 0.39
SNU13-206ENST00000469028 ARAP3Q8WWN8 1544 aa17.49■□□□□ 0.39
SNU13-206ENST00000469028 MYO5CQ9NQX4 1742 aa17.49■□□□□ 0.39
SNU13-206ENST00000469028 FANCAO15360 1455 aa17.49■□□□□ 0.39
SNU13-206ENST00000469028 TIAM1Q13009 1591 aa17.48■□□□□ 0.39
SNU13-206ENST00000469028 PHLDB1Q86UU1 1377 aa17.47■□□□□ 0.39
SNU13-206ENST00000469028 EHBP1L1Q8N3D4 1523 aa17.47■□□□□ 0.39
SNU13-206ENST00000469028 CFAP74Q9C0B2 1584 aa17.46■□□□□ 0.39
SNU13-206ENST00000469028 MTUS2Q5JR59 1369 aa17.46■□□□□ 0.39
SNU13-206ENST00000469028 AKNAQ7Z591 1439 aa17.45■□□□□ 0.38
SNU13-206ENST00000469028 PREX2Q70Z35 1606 aa17.44■□□□□ 0.38
SNU13-206ENST00000469028 FRMPD1Q5SYB0 1578 aa17.44■□□□□ 0.38
SNU13-206ENST00000469028 CDC42BPBQ9Y5S2 1711 aa17.44■□□□□ 0.38
SNU13-206ENST00000469028 ARHGAP5Q13017 1502 aa17.42■□□□□ 0.38
SNU13-206ENST00000469028 MAP3K1Q13233 1512 aa17.42■□□□□ 0.38
SNU13-206ENST00000469028 CDC42BPAQ5VT25 1732 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms