RNA–Protein interactions for RNA: ENST00000468861.5

FXR1-207, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 2 BASIC

Gene FXR1, Length 1,989 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-207ENST00000468861 CCDC88BA6NC98 1476 aa15.5■□□□□ 0.07
FXR1-207ENST00000468861 KIF21BO75037 1637 aa15.5■□□□□ 0.07
FXR1-207ENST00000468861 CUX2O14529 1486 aa15.5■□□□□ 0.07
FXR1-207ENST00000468861 MROH2BQ7Z745 1585 aa15.48■□□□□ 0.07
FXR1-207ENST00000468861 U3KPZ7 1027 aaPredicted RBP15.47■□□□□ 0.07
FXR1-207ENST00000468861 WIZO95785 1651 aa15.47■□□□□ 0.07
FXR1-207ENST00000468861 NACADO15069 1562 aa15.45■□□□□ 0.06
FXR1-207ENST00000468861 CEP164Q9UPV0 1460 aa15.45■□□□□ 0.06
FXR1-207ENST00000468861 ITGAEP38570 1179 aa15.44■□□□□ 0.06
FXR1-207ENST00000468861 SALL2Q9Y467 1007 aaPredicted RBP15.44■□□□□ 0.06
FXR1-207ENST00000468861 BAZ1BQ9UIG0 1483 aaKnown RBP15.43■□□□□ 0.06
FXR1-207ENST00000468861 SOGA1O94964 1423 aa15.43■□□□□ 0.06
FXR1-207ENST00000468861 CLIP1P30622 1438 aa15.43■□□□□ 0.06
FXR1-207ENST00000468861 KCNH8Q96L42 1107 aa15.42■□□□□ 0.06
FXR1-207ENST00000468861 UBTFP17480 764 aaKnown RBP15.41■□□□□ 0.06
FXR1-207ENST00000468861 NOP58Q9Y2X3 529 aaKnown RBP15.41■□□□□ 0.06
FXR1-207ENST00000468861 CECR2Q9BXF3 1484 aa15.36■□□□□ 0.05
FXR1-207ENST00000468861 RTL5Q5HYW3 569 aaPredicted RBP15.35■□□□□ 0.05
FXR1-207ENST00000468861 TOP2AP11388 1531 aaKnown RBP15.34■□□□□ 0.05
FXR1-207ENST00000468861 RRBP1Q9P2E9 1410 aaKnown RBP15.33■□□□□ 0.04
FXR1-207ENST00000468861 PPP4R2Q9NY27 417 aa15.31■□□□□ 0.04
FXR1-207ENST00000468861 PPP1R15AO75807 674 aaPredicted RBP15.31■□□□□ 0.04
FXR1-207ENST00000468861 ANP32CO43423 234 aa15.29■□□□□ 0.04
FXR1-207ENST00000468861 RUSC2Q8N2Y8 1516 aa15.26■□□□□ 0.03
FXR1-207ENST00000468861 C11orf95C9JLR9 678 aaPredicted RBP15.26■□□□□ 0.03
FXR1-207ENST00000468861 TIMELESSQ9UNS1 1208 aa15.26■□□□□ 0.03
FXR1-207ENST00000468861 MAPKBP1O60336 1514 aa15.25■□□□□ 0.03
FXR1-207ENST00000468861 TRIM52Q96A61 297 aa15.25■□□□□ 0.03
FXR1-207ENST00000468861 ZNF219Q9P2Y4 722 aaPredicted RBP15.25■□□□□ 0.03
FXR1-207ENST00000468861 SMARCA2P51531 1590 aa15.24■□□□□ 0.03
FXR1-207ENST00000468861 NBR1Q14596 966 aa15.24■□□□□ 0.03
FXR1-207ENST00000468861 DDX10Q13206 875 aaKnown RBP15.23■□□□□ 0.03
FXR1-207ENST00000468861 USP35Q9P2H5 1018 aa15.23■□□□□ 0.03
FXR1-207ENST00000468861 WASHC2AQ641Q2 1341 aa15.22■□□□□ 0.03
FXR1-207ENST00000468861 CCDC136Q96JN2 1154 aa15.22■□□□□ 0.03
FXR1-207ENST00000468861 WDR97A6NE52 1622 aa15.2■□□□□ 0.02
FXR1-207ENST00000468861 ANP32AP39687 249 aaKnown RBP15.2■□□□□ 0.02
FXR1-207ENST00000468861 IL27Q8NEV9 243 aa15.2■□□□□ 0.02
FXR1-207ENST00000468861 IPO9Q96P70 1041 aaKnown RBP15.19■□□□□ 0.02
FXR1-207ENST00000468861 PAK3O75914 559 aaPredicted RBP15.16■□□□□ 0.02
FXR1-207ENST00000468861 WASHC2CQ9Y4E1 1318 aa15.15■□□□□ 0.02
FXR1-207ENST00000468861 SYNJ1O43426 1573 aa15.14■□□□□ 0.01
FXR1-207ENST00000468861 ZBTB47Q9UFB7 747 aaPredicted RBP15.14■□□□□ 0.01
FXR1-207ENST00000468861 CCNB3Q8WWL7 1395 aa15.13■□□□□ 0.01
FXR1-207ENST00000468861 EIF5BO60841 1220 aaKnown RBP15.11■□□□□ 0.01
FXR1-207ENST00000468861 PKNOX2Q96KN3 472 aa15.11■□□□□ 0.01
FXR1-207ENST00000468861 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.11■□□□□ 0.01
FXR1-207ENST00000468861 ERICH3Q5RHP9 1530 aa15.09■□□□□ 0.01
FXR1-207ENST00000468861 HNRNPUQ00839 825 aaKnown RBP eCLIP15.09■□□□□ 0.01
FXR1-207ENST00000468861 RAB3GAP2Q9H2M9 1393 aa15.09■□□□□ 0.01
FXR1-207ENST00000468861 NCAPD3P42695 1498 aa15.07■□□□□ 0
FXR1-207ENST00000468861 RSPH6AQ9H0K4 717 aa15.07■□□□□ 0
FXR1-207ENST00000468861 ARAP1Q96P48 1450 aa15.06■□□□□ 0
FXR1-207ENST00000468861 RAPGEF2Q9Y4G8 1499 aa15.06■□□□□ 0
FXR1-207ENST00000468861 SPDYE4A6NLX3 237 aa15.05■□□□□ -0
FXR1-207ENST00000468861 FBXO3Q9UK99 471 aa15.05■□□□□ -0
FXR1-207ENST00000468861 PEG3Q9GZU2 1588 aa15.05■□□□□ -0
FXR1-207ENST00000468861 IRX6P78412 446 aaPredicted RBP15.04■□□□□ -0
FXR1-207ENST00000468861 GLIPR1L2Q4G1C9 344 aa15.04■□□□□ -0
FXR1-207ENST00000468861 SETD5Q9C0A6 1442 aa15.04■□□□□ -0
FXR1-207ENST00000468861 PPM1GO15355 546 aaPredicted RBP15.03■□□□□ -0
FXR1-207ENST00000468861 SMARCA4P51532 1647 aa15.03■□□□□ -0
FXR1-207ENST00000468861 MKRN4PQ13434 485 aaPredicted RBP15□□□□□ -0.01
FXR1-207ENST00000468861 B4GALNT3Q6L9W6 998 aa15□□□□□ -0.01
FXR1-207ENST00000468861 MAP3K1Q13233 1512 aa14.99□□□□□ -0.01
FXR1-207ENST00000468861 ZBED9Q6R2W3 1325 aa14.98□□□□□ -0.01
FXR1-207ENST00000468861 FHAD1B1AJZ9 1412 aa14.95□□□□□ -0.02
FXR1-207ENST00000468861 NEFMP07197 916 aa14.95□□□□□ -0.02
FXR1-207ENST00000468861 KANK4Q5T7N3 995 aaPredicted RBP14.93□□□□□ -0.02
FXR1-207ENST00000468861 FAM43AQ8N2R8 423 aa14.92□□□□□ -0.02
FXR1-207ENST00000468861 NCOA2Q15596 1464 aa14.91□□□□□ -0.02
FXR1-207ENST00000468861 GSE1Q14687 1217 aa14.91□□□□□ -0.02
FXR1-207ENST00000468861 PROM2Q8N271 834 aa14.91□□□□□ -0.02
FXR1-207ENST00000468861 SMG6Q86US8 1419 aaKnown RBP14.9□□□□□ -0.02
FXR1-207ENST00000468861 RNF123Q5XPI4 1314 aa14.9□□□□□ -0.02
FXR1-207ENST00000468861 PRXQ9BXM0 1461 aa14.89□□□□□ -0.03
FXR1-207ENST00000468861 FBLN2P98095 1184 aa14.86□□□□□ -0.03
FXR1-207ENST00000468861 TIAM1Q13009 1591 aa14.86□□□□□ -0.03
FXR1-207ENST00000468861 TONSLQ96HA7 1378 aa14.85□□□□□ -0.03
FXR1-207ENST00000468861 CNTLNQ9NXG0 1405 aa14.85□□□□□ -0.03
FXR1-207ENST00000468861 VASPP50552 380 aaPredicted RBP14.85□□□□□ -0.03
FXR1-207ENST00000468861 DDRGK1Q96HY6 314 aa14.85□□□□□ -0.03
FXR1-207ENST00000468861 SIN3AQ96ST3 1273 aa14.85□□□□□ -0.03
FXR1-207ENST00000468861 BRPF3Q9ULD4 1205 aa14.85□□□□□ -0.03
FXR1-207ENST00000468861 TCERG1O14776 1098 aaKnown RBP14.84□□□□□ -0.03
FXR1-207ENST00000468861 TRHP20396 242 aaPredicted RBP14.83□□□□□ -0.04
FXR1-207ENST00000468861 TOP2BQ02880 1626 aa14.83□□□□□ -0.04
FXR1-207ENST00000468861 MS4A1P11836 297 aa14.82□□□□□ -0.04
FXR1-207ENST00000468861 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.82□□□□□ -0.041e-6■□□□□ 8.8
FXR1-207ENST00000468861 SPINK5Q9NQ38 1064 aaPredicted RBP14.81□□□□□ -0.04
FXR1-207ENST00000468861 BIVM-ERCC5R4GMW8 1640 aa14.8□□□□□ -0.04
FXR1-207ENST00000468861 DAXXQ9UER7 740 aaPredicted RBP14.79□□□□□ -0.04
FXR1-207ENST00000468861 POLA2Q14181 598 aa14.78□□□□□ -0.04
FXR1-207ENST00000468861 ABCA5Q8WWZ7 1642 aa14.78□□□□□ -0.04
FXR1-207ENST00000468861 LAS1LQ9Y4W2 734 aaKnown RBP14.78□□□□□ -0.04
FXR1-207ENST00000468861 CFAP43Q8NDM7 1665 aa14.77□□□□□ -0.04
FXR1-207ENST00000468861 HIRIP3Q9BW71 556 aaPredicted RBP14.76□□□□□ -0.05
FXR1-207ENST00000468861 POLR1AO95602 1720 aaPredicted RBP14.76□□□□□ -0.05
FXR1-207ENST00000468861 NUDCQ9Y266 331 aa14.76□□□□□ -0.05
FXR1-207ENST00000468861 ARHGAP35Q9NRY4 1499 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms