RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 CUL7Q14999 1698 aa19.62■□□□□ 0.73
CDHR3-205ENST00000468143 TRHP20396 242 aaPredicted RBP19.61■□□□□ 0.73
CDHR3-205ENST00000468143 SHROOM2Q13796 1616 aa19.61■□□□□ 0.73
CDHR3-205ENST00000468143 KIAA0586Q9BVV6 1533 aa19.56■□□□□ 0.72
CDHR3-205ENST00000468143 RAPGEF2Q9Y4G8 1499 aa19.5■□□□□ 0.71
CDHR3-205ENST00000468143 TTBK1Q5TCY1 1321 aaPredicted RBP19.48■□□□□ 0.71
CDHR3-205ENST00000468143 FAM9AQ8IZU1 332 aaPredicted RBP19.4■□□□□ 0.7
CDHR3-205ENST00000468143 CSRNP3Q8WYN3 585 aa19.4■□□□□ 0.7
CDHR3-205ENST00000468143 IQGAP2Q13576 1575 aa19.4■□□□□ 0.7
CDHR3-205ENST00000468143 CARMIL2Q6F5E8 1435 aa19.38■□□□□ 0.69
CDHR3-205ENST00000468143 PRXQ9BXM0 1461 aa19.38■□□□□ 0.69
CDHR3-205ENST00000468143 PTPRGP23470 1445 aa19.37■□□□□ 0.69
CDHR3-205ENST00000468143 CHIC1Q5VXU3 224 aa19.37■□□□□ 0.69
CDHR3-205ENST00000468143 NPM1P06748 294 aaKnown RBP eCLIP19.36■□□□□ 0.69
CDHR3-205ENST00000468143 TNIKQ9UKE5 1360 aa19.34■□□□□ 0.69
CDHR3-205ENST00000468143 DISP1Q96F81 1524 aa19.32■□□□□ 0.68
CDHR3-205ENST00000468143 UGGT2Q9NYU1 1516 aa19.29■□□□□ 0.68
CDHR3-205ENST00000468143 ADCY10Q96PN6 1610 aa19.29■□□□□ 0.68
CDHR3-205ENST00000468143 EEA1Q15075 1411 aa19.26■□□□□ 0.67
CDHR3-205ENST00000468143 EHMT2Q96KQ7 1210 aa19.23■□□□□ 0.67
CDHR3-205ENST00000468143 CTTNBP2Q8WZ74 1663 aa19.23■□□□□ 0.67
CDHR3-205ENST00000468143 FAM69CQ0P6D2 419 aa19.22■□□□□ 0.67
CDHR3-205ENST00000468143 P3H3Q8IVL6 736 aa19.22■□□□□ 0.67
CDHR3-205ENST00000468143 KIAA0556O60303 1618 aa19.22■□□□□ 0.67
CDHR3-205ENST00000468143 RANGAP1P46060 587 aaPredicted RBP19.21■□□□□ 0.67
CDHR3-205ENST00000468143 UACAQ9BZF9 1416 aa19.21■□□□□ 0.67
CDHR3-205ENST00000468143 GOLGA3Q08378 1498 aa19.18■□□□□ 0.66
CDHR3-205ENST00000468143 MAPKBP1O60336 1514 aa19.17■□□□□ 0.66
CDHR3-205ENST00000468143 ABCC2Q92887 1545 aa19.16■□□□□ 0.66
CDHR3-205ENST00000468143 ABCC10Q5T3U5 1492 aa19.16■□□□□ 0.66
CDHR3-205ENST00000468143 UHRF1BP1LA0JNW5 1464 aa19.15■□□□□ 0.66
CDHR3-205ENST00000468143 PLB1Q6P1J6 1458 aa19.12■□□□□ 0.65
CDHR3-205ENST00000468143 KIF13AQ9H1H9 1805 aa19.11■□□□□ 0.65
CDHR3-205ENST00000468143 ASXL2Q76L83 1435 aa19.1■□□□□ 0.65
CDHR3-205ENST00000468143 DIP2BQ9P265 1576 aa19.08■□□□□ 0.65
CDHR3-205ENST00000468143 UBTFP17480 764 aaKnown RBP19.08■□□□□ 0.64
CDHR3-205ENST00000468143 KDM5BQ9UGL1 1544 aa19.07■□□□□ 0.64
CDHR3-205ENST00000468143 ARID3CA6NKF2 412 aa19.07■□□□□ 0.64
CDHR3-205ENST00000468143 KIF21BO75037 1637 aa19.07■□□□□ 0.64
CDHR3-205ENST00000468143 ABCA8O94911 1581 aa19.03■□□□□ 0.64
CDHR3-205ENST00000468143 ZCCHC11Q5TAX3 1644 aaKnown RBP19.02■□□□□ 0.64
CDHR3-205ENST00000468143 SAMD9Q5K651 1589 aa19.01■□□□□ 0.63
CDHR3-205ENST00000468143 FHOD3Q2V2M9 1422 aa19■□□□□ 0.63
CDHR3-205ENST00000468143 KCNH8Q96L42 1107 aa18.99■□□□□ 0.63
CDHR3-205ENST00000468143 EPRSP07814 1512 aaKnown RBP18.96■□□□□ 0.63
CDHR3-205ENST00000468143 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.95■□□□□ 0.62
CDHR3-205ENST00000468143 HNRNPUL2Q1KMD3 747 aaKnown RBP18.95■□□□□ 0.62
CDHR3-205ENST00000468143 TSPOAP1O95153 1857 aa18.94■□□□□ 0.62
CDHR3-205ENST00000468143 WDR7Q9Y4E6 1490 aa18.94■□□□□ 0.62
CDHR3-205ENST00000468143 GLI2P10070 1586 aa18.93■□□□□ 0.62
CDHR3-205ENST00000468143 ATP10BO94823 1461 aa18.93■□□□□ 0.62
CDHR3-205ENST00000468143 EFCAB5A4FU69 1503 aa18.89■□□□□ 0.61
CDHR3-205ENST00000468143 RAPGEF6Q8TEU7 1601 aa18.89■□□□□ 0.61
CDHR3-205ENST00000468143 ATP1B4Q9UN42 357 aaPredicted RBP18.86■□□□□ 0.61
CDHR3-205ENST00000468143 NUP153P49790 1475 aaKnown RBP18.85■□□□□ 0.61
CDHR3-205ENST00000468143 KDM6BO15054 1643 aa18.85■□□□□ 0.61
CDHR3-205ENST00000468143 PPRC1Q5VV67 1664 aaKnown RBP18.84■□□□□ 0.61
CDHR3-205ENST00000468143 MAP3K4Q9Y6R4 1608 aa18.84■□□□□ 0.61
CDHR3-205ENST00000468143 ARHGAP35Q9NRY4 1499 aa18.84■□□□□ 0.61
CDHR3-205ENST00000468143 CD109Q6YHK3 1445 aa18.83■□□□□ 0.61
CDHR3-205ENST00000468143 PLEKHD1A6NEE1 506 aa18.8■□□□□ 0.6
CDHR3-205ENST00000468143 TEX14Q8IWB6 1497 aa18.78■□□□□ 0.6
CDHR3-205ENST00000468143 COL17A1Q9UMD9 1497 aaPredicted RBP18.78■□□□□ 0.6
CDHR3-205ENST00000468143 FMN1Q68DA7 1419 aa18.76■□□□□ 0.59
CDHR3-205ENST00000468143 MAGI3Q5TCQ9 1506 aa18.74■□□□□ 0.59
CDHR3-205ENST00000468143 AEBP2Q6ZN18 517 aaPredicted RBP18.74■□□□□ 0.59
CDHR3-205ENST00000468143 CFAP43Q8NDM7 1665 aa18.73■□□□□ 0.59
CDHR3-205ENST00000468143 CDK13Q14004 1512 aaKnown RBP18.73■□□□□ 0.59
CDHR3-205ENST00000468143 CLIP1P30622 1438 aa18.68■□□□□ 0.58
CDHR3-205ENST00000468143 ABCA9Q8IUA7 1624 aa18.68■□□□□ 0.58
CDHR3-205ENST00000468143 LOC105371045A0A1W2PR82 267 aa18.66■□□□□ 0.58
CDHR3-205ENST00000468143 HECW1Q76N89 1606 aa18.66■□□□□ 0.58
CDHR3-205ENST00000468143 CDK11AQ9UQ88 783 aaPredicted RBP18.64■□□□□ 0.57
CDHR3-205ENST00000468143 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.61■□□□□ 0.57
CDHR3-205ENST00000468143 KDM4FA0A1W2PPD8 638 aa18.61■□□□□ 0.57
CDHR3-205ENST00000468143 RAPGEF3O95398 923 aa18.61■□□□□ 0.57
CDHR3-205ENST00000468143 CASKIN1Q8WXD9 1431 aa18.6■□□□□ 0.57
CDHR3-205ENST00000468143 PCF11O94913 1555 aaKnown RBP18.58■□□□□ 0.56
CDHR3-205ENST00000468143 ARAP3Q8WWN8 1544 aa18.58■□□□□ 0.56
CDHR3-205ENST00000468143 PHLDB1Q86UU1 1377 aa18.57■□□□□ 0.56
CDHR3-205ENST00000468143 NEO1Q92859 1461 aa18.57■□□□□ 0.56
CDHR3-205ENST00000468143 TTC37Q6PGP7 1564 aa18.56■□□□□ 0.56
CDHR3-205ENST00000468143 LRRIQ1Q96JM4 1722 aa18.55■□□□□ 0.56
CDHR3-205ENST00000468143 TROQ12816 1431 aaPredicted RBP18.55■□□□□ 0.56
CDHR3-205ENST00000468143 CEP162Q5TB80 1403 aa18.55■□□□□ 0.56
CDHR3-205ENST00000468143 FANCAO15360 1455 aa18.54■□□□□ 0.56
CDHR3-205ENST00000468143 AKNAQ7Z591 1439 aa18.54■□□□□ 0.56
CDHR3-205ENST00000468143 PLCH2O75038 1416 aa18.52■□□□□ 0.56
CDHR3-205ENST00000468143 CCDC18Q5T9S5 1454 aa18.52■□□□□ 0.55
CDHR3-205ENST00000468143 FYCO1Q9BQS8 1478 aa18.52■□□□□ 0.55
CDHR3-205ENST00000468143 KIF14Q15058 1648 aa18.51■□□□□ 0.55
CDHR3-205ENST00000468143 EFCAB2Q5VUJ9 269 aa18.49■□□□□ 0.55
CDHR3-205ENST00000468143 DENND4BO75064 1496 aaPredicted RBP18.48■□□□□ 0.55
CDHR3-205ENST00000468143 ADGRL1O94910 1474 aa18.48■□□□□ 0.55
CDHR3-205ENST00000468143 SCAPERQ9BY12 1400 aa18.45■□□□□ 0.54
CDHR3-205ENST00000468143 FRMPD1Q5SYB0 1578 aa18.45■□□□□ 0.54
CDHR3-205ENST00000468143 CFAP74Q9C0B2 1584 aa18.43■□□□□ 0.54
CDHR3-205ENST00000468143 ARHGAP5Q13017 1502 aa18.42■□□□□ 0.54
CDHR3-205ENST00000468143 MYO5CQ9NQX4 1742 aa18.41■□□□□ 0.54
CDHR3-205ENST00000468143 ARID4BQ4LE39 1312 aaPredicted RBP18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 325 ms