RNA–Protein interactions for RNA: ENST00000467997.6

PACRGL-204, Transcript of parkin coregulated like, humanhuman

TSL 5

Gene PACRGL, Length 1,373 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-204ENST00000467997 RAPGEF2Q9Y4G8 1499 aa37.5■■■■□ 3.59
PACRGL-204ENST00000467997 JPH4Q96JJ6 628 aa37.45■■■■□ 3.59
PACRGL-204ENST00000467997 CHIC1Q5VXU3 224 aa37.42■■■■□ 3.58
PACRGL-204ENST00000467997 ERCC6L2Q5T890 1561 aa37.42■■■■□ 3.58
PACRGL-204ENST00000467997 PRG4Q92954 1404 aaPredicted RBP37.41■■■■□ 3.58
PACRGL-204ENST00000467997 EEA1Q15075 1411 aa37.38■■■■□ 3.58
PACRGL-204ENST00000467997 PRXQ9BXM0 1461 aa37.34■■■■□ 3.57
PACRGL-204ENST00000467997 CSRNP3Q8WYN3 585 aa37.29■■■■□ 3.56
PACRGL-204ENST00000467997 IQGAP2Q13576 1575 aa37.28■■■■□ 3.56
PACRGL-204ENST00000467997 CARMIL2Q6F5E8 1435 aa37.13■■■■□ 3.53
PACRGL-204ENST00000467997 CTTNBP2Q8WZ74 1663 aa37.11■■■■□ 3.53
PACRGL-204ENST00000467997 FAM9AQ8IZU1 332 aaPredicted RBP37.11■■■■□ 3.53
PACRGL-204ENST00000467997 UGGT2Q9NYU1 1516 aa37.08■■■■□ 3.53
PACRGL-204ENST00000467997 DISP1Q96F81 1524 aa37■■■■□ 3.51
PACRGL-204ENST00000467997 TNIKQ9UKE5 1360 aa36.99■■■■□ 3.51
PACRGL-204ENST00000467997 PTPRGP23470 1445 aa36.96■■■■□ 3.51
PACRGL-204ENST00000467997 KIF21BO75037 1637 aa36.95■■■■□ 3.51
PACRGL-204ENST00000467997 KIAA0556O60303 1618 aa36.92■■■■□ 3.5
PACRGL-204ENST00000467997 GOLGA3Q08378 1498 aa36.9■■■■□ 3.5
PACRGL-204ENST00000467997 TTBK1Q5TCY1 1321 aaPredicted RBP36.85■■■■□ 3.49
PACRGL-204ENST00000467997 TRHP20396 242 aaPredicted RBP36.85■■■■□ 3.49
PACRGL-204ENST00000467997 ADCY10Q96PN6 1610 aa36.83■■■■□ 3.49
PACRGL-204ENST00000467997 NPM1P06748 294 aaKnown RBP eCLIP36.78■■■■□ 3.48
PACRGL-204ENST00000467997 UACAQ9BZF9 1416 aa36.72■■■■□ 3.47
PACRGL-204ENST00000467997 UHRF1BP1LA0JNW5 1464 aa36.69■■■■□ 3.46
PACRGL-204ENST00000467997 ABCC2Q92887 1545 aa36.66■■■■□ 3.46
PACRGL-204ENST00000467997 SAMD9Q5K651 1589 aa36.65■■■■□ 3.46
PACRGL-204ENST00000467997 MAPKBP1O60336 1514 aa36.65■■■■□ 3.46
PACRGL-204ENST00000467997 UBTFP17480 764 aaKnown RBP36.64■■■■□ 3.46
PACRGL-204ENST00000467997 EHMT2Q96KQ7 1210 aa36.62■■■■□ 3.45
PACRGL-204ENST00000467997 P3H3Q8IVL6 736 aa36.56■■■■□ 3.44
PACRGL-204ENST00000467997 RANGAP1P46060 587 aaPredicted RBP36.55■■■■□ 3.44
PACRGL-204ENST00000467997 PLB1Q6P1J6 1458 aa36.55■■■■□ 3.44
PACRGL-204ENST00000467997 EFCAB5A4FU69 1503 aa36.52■■■■□ 3.44
PACRGL-204ENST00000467997 ABCA8O94911 1581 aa36.51■■■■□ 3.44
PACRGL-204ENST00000467997 KDM5BQ9UGL1 1544 aa36.51■■■■□ 3.43
PACRGL-204ENST00000467997 ABCC10Q5T3U5 1492 aa36.48■■■■□ 3.43
PACRGL-204ENST00000467997 FHOD3Q2V2M9 1422 aa36.43■■■■□ 3.42
PACRGL-204ENST00000467997 ZCCHC11Q5TAX3 1644 aaKnown RBP36.41■■■■□ 3.42
PACRGL-204ENST00000467997 ASXL2Q76L83 1435 aa36.41■■■■□ 3.42
PACRGL-204ENST00000467997 KIF13AQ9H1H9 1805 aa36.41■■■■□ 3.42
PACRGL-204ENST00000467997 DIP2BQ9P265 1576 aa36.4■■■■□ 3.42
PACRGL-204ENST00000467997 FAM69CQ0P6D2 419 aa36.39■■■■□ 3.42
PACRGL-204ENST00000467997 RAPGEF6Q8TEU7 1601 aa36.31■■■■□ 3.4
PACRGL-204ENST00000467997 ARHGAP35Q9NRY4 1499 aa36.28■■■■□ 3.4
PACRGL-204ENST00000467997 WDR7Q9Y4E6 1490 aa36.24■■■■□ 3.39
PACRGL-204ENST00000467997 GLI2P10070 1586 aa36.2■■■■□ 3.39
PACRGL-204ENST00000467997 ATP10BO94823 1461 aa36.2■■■■□ 3.39
PACRGL-204ENST00000467997 EPRSP07814 1512 aaKnown RBP36.2■■■■□ 3.39
PACRGL-204ENST00000467997 FMN1Q68DA7 1419 aa36.19■■■■□ 3.38
PACRGL-204ENST00000467997 ARID3CA6NKF2 412 aa36.18■■■■□ 3.38
PACRGL-204ENST00000467997 NUP153P49790 1475 aaKnown RBP36.18■■■■□ 3.38
PACRGL-204ENST00000467997 CLIP1P30622 1438 aa36.08■■■■□ 3.37
PACRGL-204ENST00000467997 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.07■■■■□ 3.36
PACRGL-204ENST00000467997 HNRNPUL2Q1KMD3 747 aaKnown RBP36.07■■■■□ 3.36
PACRGL-204ENST00000467997 TSPOAP1O95153 1857 aa36.04■■■■□ 3.36
PACRGL-204ENST00000467997 KCNH8Q96L42 1107 aa36.02■■■■□ 3.36
PACRGL-204ENST00000467997 HECW1Q76N89 1606 aa36.01■■■■□ 3.36
PACRGL-204ENST00000467997 MAP3K4Q9Y6R4 1608 aa36.01■■■■□ 3.36
PACRGL-204ENST00000467997 ATP1B4Q9UN42 357 aaPredicted RBP35.94■■■■□ 3.34
PACRGL-204ENST00000467997 PPRC1Q5VV67 1664 aaKnown RBP35.93■■■■□ 3.34
PACRGL-204ENST00000467997 CFAP43Q8NDM7 1665 aa35.93■■■■□ 3.34
PACRGL-204ENST00000467997 TEX14Q8IWB6 1497 aa35.92■■■■□ 3.34
PACRGL-204ENST00000467997 PLEKHD1A6NEE1 506 aa35.91■■■■□ 3.34
PACRGL-204ENST00000467997 CDK13Q14004 1512 aaKnown RBP35.91■■■■□ 3.34
PACRGL-204ENST00000467997 CEP162Q5TB80 1403 aa35.9■■■■□ 3.34
PACRGL-204ENST00000467997 CD109Q6YHK3 1445 aa35.9■■■■□ 3.34
PACRGL-204ENST00000467997 CASKIN1Q8WXD9 1431 aa35.87■■■■□ 3.33
PACRGL-204ENST00000467997 PCF11O94913 1555 aaKnown RBP35.86■■■■□ 3.33
PACRGL-204ENST00000467997 LOC105371045A0A1W2PR82 267 aa35.86■■■■□ 3.33
PACRGL-204ENST00000467997 KDM6BO15054 1643 aa35.85■■■■□ 3.33
PACRGL-204ENST00000467997 MAGI3Q5TCQ9 1506 aa35.84■■■■□ 3.33
PACRGL-204ENST00000467997 ABCA9Q8IUA7 1624 aa35.83■■■■□ 3.33
PACRGL-204ENST00000467997 FYCO1Q9BQS8 1478 aa35.81■■■■□ 3.32
PACRGL-204ENST00000467997 CDK11AQ9UQ88 783 aaPredicted RBP35.79■■■■□ 3.32
PACRGL-204ENST00000467997 CCDC18Q5T9S5 1454 aa35.77■■■■□ 3.32
PACRGL-204ENST00000467997 LRRIQ1Q96JM4 1722 aa35.71■■■■□ 3.31
PACRGL-204ENST00000467997 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.66■■■■□ 3.3
PACRGL-204ENST00000467997 TROQ12816 1431 aaPredicted RBP35.66■■■■□ 3.3
PACRGL-204ENST00000467997 TTC37Q6PGP7 1564 aa35.61■■■■□ 3.29
PACRGL-204ENST00000467997 COL17A1Q9UMD9 1497 aaPredicted RBP35.6■■■■□ 3.29
PACRGL-204ENST00000467997 PHLDB1Q86UU1 1377 aa35.6■■■■□ 3.29
PACRGL-204ENST00000467997 KIF14Q15058 1648 aa35.59■■■■□ 3.29
PACRGL-204ENST00000467997 NEO1Q92859 1461 aa35.58■■■■□ 3.29
PACRGL-204ENST00000467997 ARAP3Q8WWN8 1544 aa35.52■■■■□ 3.28
PACRGL-204ENST00000467997 CFAP74Q9C0B2 1584 aa35.49■■■■□ 3.27
PACRGL-204ENST00000467997 VPS8Q8N3P4 1428 aa35.48■■■■□ 3.27
PACRGL-204ENST00000467997 FANCAO15360 1455 aa35.48■■■■□ 3.27
PACRGL-204ENST00000467997 PLCH2O75038 1416 aa35.47■■■■□ 3.27
PACRGL-204ENST00000467997 MYO5CQ9NQX4 1742 aa35.43■■■■□ 3.26
PACRGL-204ENST00000467997 AKNAQ7Z591 1439 aa35.4■■■■□ 3.26
PACRGL-204ENST00000467997 MTUS2Q5JR59 1369 aa35.39■■■■□ 3.26
PACRGL-204ENST00000467997 EFCAB2Q5VUJ9 269 aa35.34■■■■□ 3.25
PACRGL-204ENST00000467997 ARHGAP5Q13017 1502 aa35.33■■■■□ 3.25
PACRGL-204ENST00000467997 DENND4BO75064 1496 aaPredicted RBP35.32■■■■□ 3.25
PACRGL-204ENST00000467997 EHBP1L1Q8N3D4 1523 aa35.31■■■■□ 3.24
PACRGL-204ENST00000467997 RAPGEF3O95398 923 aa35.3■■■■□ 3.24
PACRGL-204ENST00000467997 ADGRL1O94910 1474 aa35.29■■■■□ 3.24
PACRGL-204ENST00000467997 PREX2Q70Z35 1606 aa35.28■■■■□ 3.24
PACRGL-204ENST00000467997 TIAM1Q13009 1591 aa35.27■■■■□ 3.24
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms