RNA–Protein interactions for RNA: ENST00000467898.3

LCA5-203, Transcript of LCA5, lebercilin, humanhuman

TSL 5 BASIC

Gene LCA5, Length 2,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-203ENST00000467898 RANGAP1P46060 587 aaPredicted RBP13.05□□□□□ -0.32
LCA5-203ENST00000467898 ARXQ96QS3 562 aa13.02□□□□□ -0.33
LCA5-203ENST00000467898 PDE4CQ08493 712 aa13□□□□□ -0.33
LCA5-203ENST00000467898 PDIA4P13667 645 aaKnown RBP13□□□□□ -0.33
LCA5-203ENST00000467898 RAPGEF2Q9Y4G8 1499 aa13□□□□□ -0.33
LCA5-203ENST00000467898 PRXQ9BXM0 1461 aa12.97□□□□□ -0.33
LCA5-203ENST00000467898 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.97□□□□□ -0.33
LCA5-203ENST00000467898 ERICH3Q5RHP9 1530 aa12.97□□□□□ -0.33
LCA5-203ENST00000467898 FGD1P98174 961 aa12.96□□□□□ -0.33
LCA5-203ENST00000467898 ZMYND15Q9H091 742 aa12.95□□□□□ -0.34
LCA5-203ENST00000467898 RSPH6AQ9H0K4 717 aa12.95□□□□□ -0.34
LCA5-203ENST00000467898 UBTFP17480 764 aaKnown RBP12.94□□□□□ -0.34
LCA5-203ENST00000467898 IL27Q8NEV9 243 aa12.94□□□□□ -0.34
LCA5-203ENST00000467898 FANCD2Q9BXW9 1451 aa12.93□□□□□ -0.34
LCA5-203ENST00000467898 C11orf95C9JLR9 678 aaPredicted RBP12.93□□□□□ -0.34
LCA5-203ENST00000467898 NESP48681 1621 aa12.92□□□□□ -0.34
LCA5-203ENST00000467898 KIF27Q86VH2 1401 aa12.91□□□□□ -0.34
LCA5-203ENST00000467898 LAMC3Q9Y6N6 1575 aa12.91□□□□□ -0.34
LCA5-203ENST00000467898 FGD5Q6ZNL6 1462 aa12.91□□□□□ -0.34
LCA5-203ENST00000467898 DNMBPQ6XZF7 1577 aa12.9□□□□□ -0.35
LCA5-203ENST00000467898 CLIP1P30622 1438 aa12.88□□□□□ -0.35
LCA5-203ENST00000467898 AAMPQ13685 434 aa12.87□□□□□ -0.35
LCA5-203ENST00000467898 TOPBP1Q92547 1522 aa12.85□□□□□ -0.35
LCA5-203ENST00000467898 CUX2O14529 1486 aa12.85□□□□□ -0.35
LCA5-203ENST00000467898 DNAJC5BQ9UF47 199 aa12.84□□□□□ -0.35
LCA5-203ENST00000467898 RTL5Q5HYW3 569 aaPredicted RBP12.83□□□□□ -0.35
LCA5-203ENST00000467898 VPS8Q8N3P4 1428 aa12.83□□□□□ -0.36
LCA5-203ENST00000467898 TAF7LQ5H9L4 462 aa12.83□□□□□ -0.36
LCA5-203ENST00000467898 WDR97A6NE52 1622 aa12.82□□□□□ -0.36
LCA5-203ENST00000467898 IGF1RP08069 1367 aa12.82□□□□□ -0.36
LCA5-203ENST00000467898 VSIG10Q8N0Z9 540 aa12.81□□□□□ -0.36
LCA5-203ENST00000467898 POLA1P09884 1462 aaPredicted RBP12.81□□□□□ -0.36
LCA5-203ENST00000467898 URB2Q14146 1524 aaKnown RBP12.81□□□□□ -0.36
LCA5-203ENST00000467898 ABCA10Q8WWZ4 1543 aa12.8□□□□□ -0.36
LCA5-203ENST00000467898 KIF21AQ7Z4S6 1674 aa12.8□□□□□ -0.36
LCA5-203ENST00000467898 ARAP1Q96P48 1450 aa12.8□□□□□ -0.36
LCA5-203ENST00000467898 RTN4Q9NQC3 1192 aaKnown RBP12.8□□□□□ -0.36
LCA5-203ENST00000467898 FKBP8Q14318 412 aa12.79□□□□□ -0.36
LCA5-203ENST00000467898 NOP58Q9Y2X3 529 aaKnown RBP12.79□□□□□ -0.36
LCA5-203ENST00000467898 KLHL34Q8N239 644 aa12.78□□□□□ -0.36
LCA5-203ENST00000467898 RAD54L2Q9Y4B4 1467 aa12.78□□□□□ -0.36
LCA5-203ENST00000467898 RBM10P98175 930 aaKnown RBP12.77□□□□□ -0.36
LCA5-203ENST00000467898 CDK11AQ9UQ88 783 aaPredicted RBP12.77□□□□□ -0.37
LCA5-203ENST00000467898 WASHC2CQ9Y4E1 1318 aa12.75□□□□□ -0.37
LCA5-203ENST00000467898 BCANQ96GW7 911 aa12.75□□□□□ -0.37
LCA5-203ENST00000467898 WASHC2AQ641Q2 1341 aa12.74□□□□□ -0.37
LCA5-203ENST00000467898 PDS5BQ9NTI5 1447 aa12.74□□□□□ -0.37
LCA5-203ENST00000467898 ARHGAP35Q9NRY4 1499 aa12.73□□□□□ -0.37
LCA5-203ENST00000467898 CARMIL1Q5VZK9 1371 aa12.72□□□□□ -0.37
LCA5-203ENST00000467898 USP35Q9P2H5 1018 aa12.72□□□□□ -0.37
LCA5-203ENST00000467898 ABCA5Q8WWZ7 1642 aa12.72□□□□□ -0.37
LCA5-203ENST00000467898 BCL11BQ9C0K0 894 aaPredicted RBP12.71□□□□□ -0.37
LCA5-203ENST00000467898 CUL7Q14999 1698 aa12.71□□□□□ -0.37
LCA5-203ENST00000467898 A0A0U1RQG5 324 aaPredicted RBP12.7□□□□□ -0.38
LCA5-203ENST00000467898 NBR1Q14596 966 aa12.69□□□□□ -0.38
LCA5-203ENST00000467898 TARBP1Q13395 1621 aaKnown RBP12.68□□□□□ -0.38
LCA5-203ENST00000467898 RRP9O43818 475 aaKnown RBP12.67□□□□□ -0.38
LCA5-203ENST00000467898 ZNF326Q5BKZ1 582 aaKnown RBP12.67□□□□□ -0.38
LCA5-203ENST00000467898 CTTNBP2Q8WZ74 1663 aa12.65□□□□□ -0.38
LCA5-203ENST00000467898 FAM43AQ8N2R8 423 aa12.64□□□□□ -0.39
LCA5-203ENST00000467898 TIMELESSQ9UNS1 1208 aa12.64□□□□□ -0.39
LCA5-203ENST00000467898 MRC2Q9UBG0 1479 aa12.6□□□□□ -0.39
LCA5-203ENST00000467898 GAPVD1Q14C86 1478 aa12.6□□□□□ -0.39
LCA5-203ENST00000467898 PBRM1Q86U86 1689 aa12.59□□□□□ -0.39
LCA5-203ENST00000467898 TDRD9Q8NDG6 1382 aaKnown RBP12.58□□□□□ -0.4
LCA5-203ENST00000467898 MAP3K1Q13233 1512 aa12.57□□□□□ -0.4
LCA5-203ENST00000467898 RSPH4AQ5TD94 716 aa12.57□□□□□ -0.4
LCA5-203ENST00000467898 WDR62O43379 1518 aa12.57□□□□□ -0.4
LCA5-203ENST00000467898 EFCAB5A4FU69 1503 aa12.57□□□□□ -0.4
LCA5-203ENST00000467898 ITGAEP38570 1179 aa12.56□□□□□ -0.4
LCA5-203ENST00000467898 KANK4Q5T7N3 995 aaPredicted RBP12.56□□□□□ -0.4
LCA5-203ENST00000467898 HSP90AA2PQ14568 343 aaPredicted RBP12.56□□□□□ -0.4
LCA5-203ENST00000467898 TIAM1Q13009 1591 aa12.55□□□□□ -0.4
LCA5-203ENST00000467898 CFAP43Q8NDM7 1665 aa12.55□□□□□ -0.4
LCA5-203ENST00000467898 PCF11O94913 1555 aaKnown RBP12.55□□□□□ -0.4
LCA5-203ENST00000467898 SAMD9Q5K651 1589 aa12.54□□□□□ -0.4
LCA5-203ENST00000467898 PAK3O75914 559 aaPredicted RBP12.53□□□□□ -0.4
LCA5-203ENST00000467898 IPO9Q96P70 1041 aaKnown RBP12.52□□□□□ -0.4
LCA5-203ENST00000467898 RRBP1Q9P2E9 1410 aaKnown RBP12.52□□□□□ -0.41
LCA5-203ENST00000467898 ADAMTS12P58397 1594 aa12.52□□□□□ -0.41
LCA5-203ENST00000467898 CENPJQ9HC77 1338 aaPredicted RBP12.51□□□□□ -0.41
LCA5-203ENST00000467898 THOC2Q8NI27 1593 aaKnown RBP12.51□□□□□ -0.41
LCA5-203ENST00000467898 NEFMP07197 916 aa12.5□□□□□ -0.41
LCA5-203ENST00000467898 FHAD1B1AJZ9 1412 aa12.5□□□□□ -0.41
LCA5-203ENST00000467898 AQRO60306 1485 aaKnown RBP eCLIP12.49□□□□□ -0.41
LCA5-203ENST00000467898 CALD1Q05682 793 aaKnown RBP12.49□□□□□ -0.41
LCA5-203ENST00000467898 FHOD3Q2V2M9 1422 aa12.49□□□□□ -0.41
LCA5-203ENST00000467898 BRD2P25440 801 aaKnown RBP12.49□□□□□ -0.41
LCA5-203ENST00000467898 ANP32AP39687 249 aaKnown RBP12.49□□□□□ -0.41
LCA5-203ENST00000467898 BRPF3Q9ULD4 1205 aa12.48□□□□□ -0.41
LCA5-203ENST00000467898 IFT140Q96RY7 1462 aa12.48□□□□□ -0.41
LCA5-203ENST00000467898 ZBTB47Q9UFB7 747 aaPredicted RBP12.48□□□□□ -0.41
LCA5-203ENST00000467898 LRRC9Q6ZRR7 1453 aa12.47□□□□□ -0.41
LCA5-203ENST00000467898 FYCO1Q9BQS8 1478 aa12.47□□□□□ -0.41
LCA5-203ENST00000467898 HOMEZQ8IX15 550 aa12.47□□□□□ -0.41
LCA5-203ENST00000467898 LRRIQ1Q96JM4 1722 aa12.47□□□□□ -0.41
LCA5-203ENST00000467898 SNAPC4Q5SXM2 1469 aa12.47□□□□□ -0.41
LCA5-203ENST00000467898 ZNF608Q9ULD9 1512 aaPredicted RBP12.47□□□□□ -0.41
LCA5-203ENST00000467898 CASKIN1Q8WXD9 1431 aa12.46□□□□□ -0.41
LCA5-203ENST00000467898 HNRNPUL2Q1KMD3 747 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms