RNA–Protein interactions for RNA: ENST00000467824.1

SYN3-209, Transcript of synapsin III, humanhuman

TSL 3

Gene SYN3, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-209ENST00000467824 RUSC2Q8N2Y8 1516 aa16.78■□□□□ 0.28
SYN3-209ENST00000467824 CUL7Q14999 1698 aa16.78■□□□□ 0.28
SYN3-209ENST00000467824 KIAA0586Q9BVV6 1533 aa16.75■□□□□ 0.27
SYN3-209ENST00000467824 CARMIL1Q5VZK9 1371 aa16.72■□□□□ 0.27
SYN3-209ENST00000467824 AEBP2Q6ZN18 517 aaPredicted RBP16.66■□□□□ 0.26
SYN3-209ENST00000467824 NPM1P06748 294 aaKnown RBP eCLIP16.64■□□□□ 0.25
SYN3-209ENST00000467824 KIF13AQ9H1H9 1805 aa16.63■□□□□ 0.25
SYN3-209ENST00000467824 CARMIL2Q6F5E8 1435 aa16.61■□□□□ 0.25
SYN3-209ENST00000467824 RAPGEF2Q9Y4G8 1499 aa16.59■□□□□ 0.25
SYN3-209ENST00000467824 IQGAP2Q13576 1575 aa16.58■□□□□ 0.24
SYN3-209ENST00000467824 PTPRGP23470 1445 aa16.57■□□□□ 0.24
SYN3-209ENST00000467824 TNIKQ9UKE5 1360 aa16.56■□□□□ 0.24
SYN3-209ENST00000467824 MAPKBP1O60336 1514 aa16.55■□□□□ 0.24
SYN3-209ENST00000467824 ADCY10Q96PN6 1610 aa16.55■□□□□ 0.24
SYN3-209ENST00000467824 ABCC10Q5T3U5 1492 aa16.53■□□□□ 0.24
SYN3-209ENST00000467824 FAM69CQ0P6D2 419 aa16.51■□□□□ 0.23
SYN3-209ENST00000467824 TTBK1Q5TCY1 1321 aaPredicted RBP16.5■□□□□ 0.23
SYN3-209ENST00000467824 DISP1Q96F81 1524 aa16.48■□□□□ 0.23
SYN3-209ENST00000467824 UGGT2Q9NYU1 1516 aa16.48■□□□□ 0.23
SYN3-209ENST00000467824 DIP2BQ9P265 1576 aa16.47■□□□□ 0.23
SYN3-209ENST00000467824 ABCC2Q92887 1545 aa16.46■□□□□ 0.23
SYN3-209ENST00000467824 UHRF1BP1LA0JNW5 1464 aa16.45■□□□□ 0.22
SYN3-209ENST00000467824 UACAQ9BZF9 1416 aa16.45■□□□□ 0.22
SYN3-209ENST00000467824 TSPOAP1O95153 1857 aa16.44■□□□□ 0.22
SYN3-209ENST00000467824 PRXQ9BXM0 1461 aa16.43■□□□□ 0.22
SYN3-209ENST00000467824 KIAA0556O60303 1618 aa16.41■□□□□ 0.22
SYN3-209ENST00000467824 GOLGA3Q08378 1498 aa16.41■□□□□ 0.22
SYN3-209ENST00000467824 PLB1Q6P1J6 1458 aa16.41■□□□□ 0.22
SYN3-209ENST00000467824 ASXL2Q76L83 1435 aa16.39■□□□□ 0.21
SYN3-209ENST00000467824 KDM6BO15054 1643 aa16.37■□□□□ 0.21
SYN3-209ENST00000467824 CTTNBP2Q8WZ74 1663 aa16.37■□□□□ 0.21
SYN3-209ENST00000467824 KDM5BQ9UGL1 1544 aa16.36■□□□□ 0.21
SYN3-209ENST00000467824 CSRNP3Q8WYN3 585 aa16.35■□□□□ 0.21
SYN3-209ENST00000467824 EEA1Q15075 1411 aa16.35■□□□□ 0.21
SYN3-209ENST00000467824 FAM9AQ8IZU1 332 aaPredicted RBP16.33■□□□□ 0.2
SYN3-209ENST00000467824 GLI2P10070 1586 aa16.32■□□□□ 0.2
SYN3-209ENST00000467824 EPRSP07814 1512 aaKnown RBP16.28■□□□□ 0.2
SYN3-209ENST00000467824 ZCCHC11Q5TAX3 1644 aaKnown RBP16.27■□□□□ 0.2
SYN3-209ENST00000467824 WDR7Q9Y4E6 1490 aa16.26■□□□□ 0.19
SYN3-209ENST00000467824 ABCA8O94911 1581 aa16.26■□□□□ 0.19
SYN3-209ENST00000467824 PPRC1Q5VV67 1664 aaKnown RBP16.25■□□□□ 0.19
SYN3-209ENST00000467824 TEX14Q8IWB6 1497 aa16.23■□□□□ 0.19
SYN3-209ENST00000467824 P3H3Q8IVL6 736 aa16.2■□□□□ 0.18
SYN3-209ENST00000467824 MAP3K4Q9Y6R4 1608 aa16.19■□□□□ 0.18
SYN3-209ENST00000467824 KDM4FA0A1W2PPD8 638 aa16.19■□□□□ 0.18
SYN3-209ENST00000467824 SAMD9Q5K651 1589 aa16.18■□□□□ 0.18
SYN3-209ENST00000467824 KCNH8Q96L42 1107 aa16.15■□□□□ 0.18
SYN3-209ENST00000467824 CD109Q6YHK3 1445 aa16.14■□□□□ 0.17
SYN3-209ENST00000467824 KIF21BO75037 1637 aa16.13■□□□□ 0.17
SYN3-209ENST00000467824 MAGI3Q5TCQ9 1506 aa16.13■□□□□ 0.17
SYN3-209ENST00000467824 ATP10BO94823 1461 aa16.12■□□□□ 0.17
SYN3-209ENST00000467824 ARID3CA6NKF2 412 aa16.12■□□□□ 0.17
SYN3-209ENST00000467824 ADGRL1O94910 1474 aa16.11■□□□□ 0.17
SYN3-209ENST00000467824 RANGAP1P46060 587 aaPredicted RBP16.11■□□□□ 0.17
SYN3-209ENST00000467824 CHIC1Q5VXU3 224 aa16.11■□□□□ 0.17
SYN3-209ENST00000467824 CFAP43Q8NDM7 1665 aa16.11■□□□□ 0.17
SYN3-209ENST00000467824 COL17A1Q9UMD9 1497 aaPredicted RBP16.1■□□□□ 0.17
SYN3-209ENST00000467824 FHOD3Q2V2M9 1422 aa16.1■□□□□ 0.17
SYN3-209ENST00000467824 EFCAB5A4FU69 1503 aa16.09■□□□□ 0.17
SYN3-209ENST00000467824 RAPGEF6Q8TEU7 1601 aa16.09■□□□□ 0.17
SYN3-209ENST00000467824 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.08■□□□□ 0.16
SYN3-209ENST00000467824 HNRNPUL2Q1KMD3 747 aaKnown RBP16.08■□□□□ 0.16
SYN3-209ENST00000467824 NUP153P49790 1475 aaKnown RBP16.05■□□□□ 0.16
SYN3-209ENST00000467824 UBTFP17480 764 aaKnown RBP16.05■□□□□ 0.16
SYN3-209ENST00000467824 PHLDB1Q86UU1 1377 aa16.02■□□□□ 0.16
SYN3-209ENST00000467824 ABCA9Q8IUA7 1624 aa16.01■□□□□ 0.15
SYN3-209ENST00000467824 PLEKHD1A6NEE1 506 aa16■□□□□ 0.15
SYN3-209ENST00000467824 ARAP3Q8WWN8 1544 aa15.99■□□□□ 0.15
SYN3-209ENST00000467824 EHMT2Q96KQ7 1210 aa15.98■□□□□ 0.15
SYN3-209ENST00000467824 FMN1Q68DA7 1419 aa15.97■□□□□ 0.15
SYN3-209ENST00000467824 NEO1Q92859 1461 aa15.97■□□□□ 0.15
SYN3-209ENST00000467824 HECW2Q9P2P5 1572 aa15.96■□□□□ 0.15
SYN3-209ENST00000467824 ARHGAP35Q9NRY4 1499 aa15.92■□□□□ 0.14
SYN3-209ENST00000467824 ATP1B4Q9UN42 357 aaPredicted RBP15.9■□□□□ 0.14
SYN3-209ENST00000467824 HECW1Q76N89 1606 aa15.9■□□□□ 0.14
SYN3-209ENST00000467824 CDK13Q14004 1512 aaKnown RBP15.89■□□□□ 0.13
SYN3-209ENST00000467824 ILDR1Q86SU0 546 aaPredicted RBP15.89■□□□□ 0.13
SYN3-209ENST00000467824 CDK11AQ9UQ88 783 aaPredicted RBP15.89■□□□□ 0.13
SYN3-209ENST00000467824 RAPGEF3O95398 923 aa15.88■□□□□ 0.13
SYN3-209ENST00000467824 FANCAO15360 1455 aa15.87■□□□□ 0.13
SYN3-209ENST00000467824 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.87■□□□□ 0.13
SYN3-209ENST00000467824 CFAP74Q9C0B2 1584 aa15.86■□□□□ 0.13
SYN3-209ENST00000467824 DENND4BO75064 1496 aaPredicted RBP15.85■□□□□ 0.13
SYN3-209ENST00000467824 AKNAQ7Z591 1439 aa15.85■□□□□ 0.13
SYN3-209ENST00000467824 TTC37Q6PGP7 1564 aa15.83■□□□□ 0.13
SYN3-209ENST00000467824 CLIP1P30622 1438 aa15.82■□□□□ 0.12
SYN3-209ENST00000467824 FRMPD1Q5SYB0 1578 aa15.82■□□□□ 0.12
SYN3-209ENST00000467824 PLCH2O75038 1416 aa15.81■□□□□ 0.12
SYN3-209ENST00000467824 TROQ12816 1431 aaPredicted RBP15.8■□□□□ 0.12
SYN3-209ENST00000467824 CASKIN1Q8WXD9 1431 aa15.78■□□□□ 0.12
SYN3-209ENST00000467824 ARID4BQ4LE39 1312 aaPredicted RBP15.78■□□□□ 0.12
SYN3-209ENST00000467824 EFCAB2Q5VUJ9 269 aa15.78■□□□□ 0.12
SYN3-209ENST00000467824 CCDC18Q5T9S5 1454 aa15.78■□□□□ 0.12
SYN3-209ENST00000467824 KIF14Q15058 1648 aa15.77■□□□□ 0.12
SYN3-209ENST00000467824 ARHGEF40Q8TER5 1519 aa15.77■□□□□ 0.11
SYN3-209ENST00000467824 ZMYM4Q5VZL5 1548 aa15.76■□□□□ 0.11
SYN3-209ENST00000467824 MAGI2Q86UL8 1455 aa15.76■□□□□ 0.11
SYN3-209ENST00000467824 SCAPERQ9BY12 1400 aa15.76■□□□□ 0.11
SYN3-209ENST00000467824 RICTORQ6R327 1708 aa15.75■□□□□ 0.11
SYN3-209ENST00000467824 POGZQ7Z3K3 1410 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms