RNA–Protein interactions for RNA: ENST00000467505.5

RB1-202, Transcript of RB transcriptional corepressor 1, humanhuman

TSL 1 (best)

Gene RB1, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RB1-202ENST00000467505 CUL7Q14999 1698 aa25.14■■□□□ 1.62
RB1-202ENST00000467505 IGF1RP08069 1367 aa25.05■■□□□ 1.6
RB1-202ENST00000467505 KIAA0586Q9BVV6 1533 aa25.03■■□□□ 1.6
RB1-202ENST00000467505 NPM1P06748 294 aaKnown RBP eCLIP24.96■■□□□ 1.59
RB1-202ENST00000467505 CARMIL1Q5VZK9 1371 aa24.93■■□□□ 1.58
RB1-202ENST00000467505 KIF13AQ9H1H9 1805 aa24.93■■□□□ 1.58
RB1-202ENST00000467505 MAPKBP1O60336 1514 aa24.87■■□□□ 1.57
RB1-202ENST00000467505 ADCY10Q96PN6 1610 aa24.86■■□□□ 1.57
RB1-202ENST00000467505 CARMIL2Q6F5E8 1435 aa24.83■■□□□ 1.57
RB1-202ENST00000467505 ABCC10Q5T3U5 1492 aa24.82■■□□□ 1.56
RB1-202ENST00000467505 IQGAP2Q13576 1575 aa24.81■■□□□ 1.56
RB1-202ENST00000467505 AEBP2Q6ZN18 517 aaPredicted RBP24.79■■□□□ 1.56
RB1-202ENST00000467505 PTPRGP23470 1445 aa24.78■■□□□ 1.56
RB1-202ENST00000467505 FAM69CQ0P6D2 419 aa24.78■■□□□ 1.56
RB1-202ENST00000467505 DIP2BQ9P265 1576 aa24.76■■□□□ 1.55
RB1-202ENST00000467505 TNIKQ9UKE5 1360 aa24.75■■□□□ 1.55
RB1-202ENST00000467505 RAPGEF2Q9Y4G8 1499 aa24.74■■□□□ 1.55
RB1-202ENST00000467505 TTBK1Q5TCY1 1321 aaPredicted RBP24.68■■□□□ 1.54
RB1-202ENST00000467505 ABCC2Q92887 1545 aa24.66■■□□□ 1.54
RB1-202ENST00000467505 UGGT2Q9NYU1 1516 aa24.64■■□□□ 1.53
RB1-202ENST00000467505 UHRF1BP1LA0JNW5 1464 aa24.63■■□□□ 1.53
RB1-202ENST00000467505 DISP1Q96F81 1524 aa24.62■■□□□ 1.53
RB1-202ENST00000467505 TSPOAP1O95153 1857 aa24.61■■□□□ 1.53
RB1-202ENST00000467505 UACAQ9BZF9 1416 aa24.6■■□□□ 1.53
RB1-202ENST00000467505 CTTNBP2Q8WZ74 1663 aa24.59■■□□□ 1.53
RB1-202ENST00000467505 PLB1Q6P1J6 1458 aa24.58■■□□□ 1.53
RB1-202ENST00000467505 KDM6BO15054 1643 aa24.58■■□□□ 1.53
RB1-202ENST00000467505 KIAA0556O60303 1618 aa24.57■■□□□ 1.52
RB1-202ENST00000467505 ASXL2Q76L83 1435 aa24.55■■□□□ 1.52
RB1-202ENST00000467505 GLI2P10070 1586 aa24.51■■□□□ 1.51
RB1-202ENST00000467505 GOLGA3Q08378 1498 aa24.51■■□□□ 1.51
RB1-202ENST00000467505 KDM5BQ9UGL1 1544 aa24.5■■□□□ 1.51
RB1-202ENST00000467505 ZCCHC11Q5TAX3 1644 aaKnown RBP24.46■■□□□ 1.51
RB1-202ENST00000467505 PRXQ9BXM0 1461 aa24.45■■□□□ 1.51
RB1-202ENST00000467505 PPRC1Q5VV67 1664 aaKnown RBP24.4■■□□□ 1.5
RB1-202ENST00000467505 EPRSP07814 1512 aaKnown RBP24.4■■□□□ 1.5
RB1-202ENST00000467505 FAM9AQ8IZU1 332 aaPredicted RBP24.39■■□□□ 1.49
RB1-202ENST00000467505 MAP3K4Q9Y6R4 1608 aa24.38■■□□□ 1.49
RB1-202ENST00000467505 TEX14Q8IWB6 1497 aa24.36■■□□□ 1.49
RB1-202ENST00000467505 WDR7Q9Y4E6 1490 aa24.34■■□□□ 1.49
RB1-202ENST00000467505 ABCA8O94911 1581 aa24.33■■□□□ 1.48
RB1-202ENST00000467505 CSRNP3Q8WYN3 585 aa24.29■■□□□ 1.48
RB1-202ENST00000467505 EEA1Q15075 1411 aa24.27■■□□□ 1.48
RB1-202ENST00000467505 CFAP43Q8NDM7 1665 aa24.25■■□□□ 1.47
RB1-202ENST00000467505 KDM4FA0A1W2PPD8 638 aa24.19■■□□□ 1.46
RB1-202ENST00000467505 SAMD9Q5K651 1589 aa24.19■■□□□ 1.46
RB1-202ENST00000467505 MAGI3Q5TCQ9 1506 aa24.18■■□□□ 1.46
RB1-202ENST00000467505 CD109Q6YHK3 1445 aa24.18■■□□□ 1.46
RB1-202ENST00000467505 KCNH8Q96L42 1107 aa24.17■■□□□ 1.46
RB1-202ENST00000467505 COL17A1Q9UMD9 1497 aaPredicted RBP24.16■■□□□ 1.46
RB1-202ENST00000467505 P3H3Q8IVL6 736 aa24.16■■□□□ 1.46
RB1-202ENST00000467505 RAPGEF6Q8TEU7 1601 aa24.11■■□□□ 1.45
RB1-202ENST00000467505 ATP10BO94823 1461 aa24.1■■□□□ 1.45
RB1-202ENST00000467505 ADGRL1O94910 1474 aa24.09■■□□□ 1.45
RB1-202ENST00000467505 ARID3CA6NKF2 412 aa24.05■■□□□ 1.44
RB1-202ENST00000467505 KIF21BO75037 1637 aa24.05■■□□□ 1.44
RB1-202ENST00000467505 ABCA9Q8IUA7 1624 aa24.03■■□□□ 1.44
RB1-202ENST00000467505 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.02■■□□□ 1.44
RB1-202ENST00000467505 HNRNPUL2Q1KMD3 747 aaKnown RBP24.02■■□□□ 1.44
RB1-202ENST00000467505 EFCAB5A4FU69 1503 aa24■■□□□ 1.43
RB1-202ENST00000467505 PHLDB1Q86UU1 1377 aa24■■□□□ 1.43
RB1-202ENST00000467505 ARAP3Q8WWN8 1544 aa23.99■■□□□ 1.43
RB1-202ENST00000467505 RANGAP1P46060 587 aaPredicted RBP23.98■■□□□ 1.43
RB1-202ENST00000467505 FHOD3Q2V2M9 1422 aa23.97■■□□□ 1.43
RB1-202ENST00000467505 NUP153P49790 1475 aaKnown RBP23.96■■□□□ 1.43
RB1-202ENST00000467505 NEO1Q92859 1461 aa23.92■■□□□ 1.42
RB1-202ENST00000467505 PLEKHD1A6NEE1 506 aa23.89■■□□□ 1.41
RB1-202ENST00000467505 UBTFP17480 764 aaKnown RBP23.84■■□□□ 1.41
RB1-202ENST00000467505 CFAP74Q9C0B2 1584 aa23.82■■□□□ 1.4
RB1-202ENST00000467505 CHIC1Q5VXU3 224 aa23.8■■□□□ 1.4
RB1-202ENST00000467505 FMN1Q68DA7 1419 aa23.78■■□□□ 1.4
RB1-202ENST00000467505 RAPGEF3O95398 923 aa23.77■■□□□ 1.4
RB1-202ENST00000467505 HECW1Q76N89 1606 aa23.76■■□□□ 1.39
RB1-202ENST00000467505 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.75■■□□□ 1.39
RB1-202ENST00000467505 HECW2Q9P2P5 1572 aa23.75■■□□□ 1.39
RB1-202ENST00000467505 FANCAO15360 1455 aa23.75■■□□□ 1.39
RB1-202ENST00000467505 DENND4BO75064 1496 aaPredicted RBP23.74■■□□□ 1.39
RB1-202ENST00000467505 FRMPD1Q5SYB0 1578 aa23.74■■□□□ 1.39
RB1-202ENST00000467505 EHMT2Q96KQ7 1210 aa23.73■■□□□ 1.39
RB1-202ENST00000467505 CDK13Q14004 1512 aaKnown RBP23.73■■□□□ 1.39
RB1-202ENST00000467505 AKNAQ7Z591 1439 aa23.72■■□□□ 1.39
RB1-202ENST00000467505 TTC37Q6PGP7 1564 aa23.72■■□□□ 1.39
RB1-202ENST00000467505 RICTORQ6R327 1708 aa23.7■■□□□ 1.39
RB1-202ENST00000467505 ARHGAP35Q9NRY4 1499 aa23.7■■□□□ 1.38
RB1-202ENST00000467505 CDK11AQ9UQ88 783 aaPredicted RBP23.7■■□□□ 1.38
RB1-202ENST00000467505 ATP1B4Q9UN42 357 aaPredicted RBP23.69■■□□□ 1.38
RB1-202ENST00000467505 ADAMTSL3P82987 1691 aa23.68■■□□□ 1.38
RB1-202ENST00000467505 ARHGEF40Q8TER5 1519 aa23.67■■□□□ 1.38
RB1-202ENST00000467505 ARID4BQ4LE39 1312 aaPredicted RBP23.66■■□□□ 1.38
RB1-202ENST00000467505 BCORL1Q5H9F3 1711 aa23.66■■□□□ 1.38
RB1-202ENST00000467505 MYO5CQ9NQX4 1742 aa23.64■■□□□ 1.37
RB1-202ENST00000467505 ZMYM4Q5VZL5 1548 aa23.63■■□□□ 1.37
RB1-202ENST00000467505 PLCH2O75038 1416 aa23.62■■□□□ 1.37
RB1-202ENST00000467505 PTPRMP28827 1452 aa23.62■■□□□ 1.37
RB1-202ENST00000467505 KIF14Q15058 1648 aa23.6■■□□□ 1.37
RB1-202ENST00000467505 MAGI2Q86UL8 1455 aa23.6■■□□□ 1.37
RB1-202ENST00000467505 CLIP1P30622 1438 aa23.59■■□□□ 1.37
RB1-202ENST00000467505 ZFYVE16Q7Z3T8 1539 aa23.59■■□□□ 1.37
RB1-202ENST00000467505 MADDQ8WXG6 1647 aa23.58■■□□□ 1.36
RB1-202ENST00000467505 POGZQ7Z3K3 1410 aa23.58■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms