RNA–Protein interactions for RNA: ENST00000467435.1

HDLBP-231, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-231ENST00000467435 EFCAB5A4FU69 1503 aa19.31■□□□□ 0.68
HDLBP-231ENST00000467435 MAGI1Q96QZ7 1491 aaPredicted RBP19.3■□□□□ 0.68
HDLBP-231ENST00000467435 SAMD9Q5K651 1589 aa19.25■□□□□ 0.67
HDLBP-231ENST00000467435 IQGAP2Q13576 1575 aa19.24■□□□□ 0.67
HDLBP-231ENST00000467435 TRIM26Q12899 539 aaPredicted RBP19.24■□□□□ 0.67
HDLBP-231ENST00000467435 GRIN2AQ12879 1464 aa19.23■□□□□ 0.67
HDLBP-231ENST00000467435 PCGF6Q9BYE7 350 aa19.22■□□□□ 0.67
HDLBP-231ENST00000467435 SYNJ2O15056 1496 aa19.22■□□□□ 0.67
HDLBP-231ENST00000467435 PPARGC1BQ86YN6 1023 aaKnown RBP19.19■□□□□ 0.66
HDLBP-231ENST00000467435 PCF11O94913 1555 aaKnown RBP19.17■□□□□ 0.66
HDLBP-231ENST00000467435 FHOD3Q2V2M9 1422 aa19.16■□□□□ 0.66
HDLBP-231ENST00000467435 CEP170Q5SW79 1584 aa19.15■□□□□ 0.66
HDLBP-231ENST00000467435 CFAP43Q8NDM7 1665 aa19.13■□□□□ 0.65
HDLBP-231ENST00000467435 CHD1O14646 1710 aa19.13■□□□□ 0.65
HDLBP-231ENST00000467435 KIAA0586Q9BVV6 1533 aa19.11■□□□□ 0.65
HDLBP-231ENST00000467435 UGGT2Q9NYU1 1516 aa19.11■□□□□ 0.65
HDLBP-231ENST00000467435 APLP2Q06481 763 aa19.11■□□□□ 0.65
HDLBP-231ENST00000467435 TTBK1Q5TCY1 1321 aaPredicted RBP19.08■□□□□ 0.65
HDLBP-231ENST00000467435 TIAM1Q13009 1591 aa19.08■□□□□ 0.65
HDLBP-231ENST00000467435 FYCO1Q9BQS8 1478 aa19.08■□□□□ 0.64
HDLBP-231ENST00000467435 NUP160Q12769 1436 aa19.08■□□□□ 0.64
HDLBP-231ENST00000467435 P3H3Q8IVL6 736 aa19.07■□□□□ 0.64
HDLBP-231ENST00000467435 CHMP7Q8WUX9 453 aaPredicted RBP19.07■□□□□ 0.64
HDLBP-231ENST00000467435 KIAA0556O60303 1618 aa19.07■□□□□ 0.64
HDLBP-231ENST00000467435 FMN1Q68DA7 1419 aa19.06■□□□□ 0.64
HDLBP-231ENST00000467435 MAP3K1Q13233 1512 aa19.05■□□□□ 0.64
HDLBP-231ENST00000467435 CASKIN1Q8WXD9 1431 aa19.03■□□□□ 0.64
HDLBP-231ENST00000467435 LRRIQ1Q96JM4 1722 aa19.02■□□□□ 0.63
HDLBP-231ENST00000467435 FBLN2P98095 1184 aa19.01■□□□□ 0.63
HDLBP-231ENST00000467435 DISP1Q96F81 1524 aa18.99■□□□□ 0.63
HDLBP-231ENST00000467435 HECW1Q76N89 1606 aa18.96■□□□□ 0.63
HDLBP-231ENST00000467435 LRRC9Q6ZRR7 1453 aa18.92■□□□□ 0.62
HDLBP-231ENST00000467435 KANK4Q5T7N3 995 aaPredicted RBP18.92■□□□□ 0.62
HDLBP-231ENST00000467435 SHROOM2Q13796 1616 aa18.89■□□□□ 0.61
HDLBP-231ENST00000467435 RAPGEF6Q8TEU7 1601 aa18.89■□□□□ 0.61
HDLBP-231ENST00000467435 CCDC18Q5T9S5 1454 aa18.88■□□□□ 0.61
HDLBP-231ENST00000467435 CARMIL2Q6F5E8 1435 aa18.87■□□□□ 0.61
HDLBP-231ENST00000467435 ATP1B4Q9UN42 357 aaPredicted RBP18.87■□□□□ 0.61
HDLBP-231ENST00000467435 CLASP1Q7Z460 1538 aa18.84■□□□□ 0.61
HDLBP-231ENST00000467435 EHBP1L1Q8N3D4 1523 aa18.83■□□□□ 0.6
HDLBP-231ENST00000467435 JPH4Q96JJ6 628 aa18.82■□□□□ 0.6
HDLBP-231ENST00000467435 EPRSP07814 1512 aaKnown RBP18.8■□□□□ 0.6
HDLBP-231ENST00000467435 RRBP1Q9P2E9 1410 aaKnown RBP18.8■□□□□ 0.6
HDLBP-231ENST00000467435 SUPT6HQ7KZ85 1726 aaKnown RBP18.8■□□□□ 0.6
HDLBP-231ENST00000467435 CDK13Q14004 1512 aaKnown RBP18.78■□□□□ 0.6
HDLBP-231ENST00000467435 PRG4Q92954 1404 aaPredicted RBP18.77■□□□□ 0.6
HDLBP-231ENST00000467435 NUP153P49790 1475 aaKnown RBP18.77■□□□□ 0.59
HDLBP-231ENST00000467435 MAGI3Q5TCQ9 1506 aa18.76■□□□□ 0.59
HDLBP-231ENST00000467435 MTUS2Q5JR59 1369 aa18.75■□□□□ 0.59
HDLBP-231ENST00000467435 ABCA8O94911 1581 aa18.75■□□□□ 0.59
HDLBP-231ENST00000467435 PLB1Q6P1J6 1458 aa18.73■□□□□ 0.59
HDLBP-231ENST00000467435 PHLDB1Q86UU1 1377 aa18.72■□□□□ 0.59
HDLBP-231ENST00000467435 HRCP23327 699 aa18.71■□□□□ 0.59
HDLBP-231ENST00000467435 CCNB3Q8WWL7 1395 aa18.7■□□□□ 0.58
HDLBP-231ENST00000467435 ERCC6L2Q5T890 1561 aa18.7■□□□□ 0.58
HDLBP-231ENST00000467435 NCOA2Q15596 1464 aa18.69■□□□□ 0.58
HDLBP-231ENST00000467435 ARHGEF11O15085 1522 aa18.68■□□□□ 0.58
HDLBP-231ENST00000467435 ADCY10Q96PN6 1610 aa18.64■□□□□ 0.57
HDLBP-231ENST00000467435 HNRNPUL2Q1KMD3 747 aaKnown RBP18.64■□□□□ 0.57
HDLBP-231ENST00000467435 PTPRGP23470 1445 aa18.64■□□□□ 0.57
HDLBP-231ENST00000467435 ARID3CA6NKF2 412 aa18.63■□□□□ 0.57
HDLBP-231ENST00000467435 MYOM3Q5VTT5 1437 aa18.61■□□□□ 0.57
HDLBP-231ENST00000467435 FGD6Q6ZV73 1430 aa18.61■□□□□ 0.57
HDLBP-231ENST00000467435 PTPN23Q9H3S7 1636 aa18.59■□□□□ 0.57
HDLBP-231ENST00000467435 ABCC2Q92887 1545 aa18.58■□□□□ 0.56
HDLBP-231ENST00000467435 TROQ12816 1431 aaPredicted RBP18.57■□□□□ 0.56
HDLBP-231ENST00000467435 ITSN2Q9NZM3 1697 aa18.57■□□□□ 0.56
HDLBP-231ENST00000467435 UACAQ9BZF9 1416 aa18.57■□□□□ 0.56
HDLBP-231ENST00000467435 KIF14Q15058 1648 aa18.56■□□□□ 0.56
HDLBP-231ENST00000467435 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.56■□□□□ 0.56
HDLBP-231ENST00000467435 ATP10BO94823 1461 aa18.55■□□□□ 0.56
HDLBP-231ENST00000467435 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.55■□□□□ 0.56
HDLBP-231ENST00000467435 CDK11AQ9UQ88 783 aaPredicted RBP18.55■□□□□ 0.56
HDLBP-231ENST00000467435 FAM50AQ14320 339 aaKnown RBP18.53■□□□□ 0.56
HDLBP-231ENST00000467435 TCOF1Q13428 1488 aaKnown RBP18.52■□□□□ 0.55
HDLBP-231ENST00000467435 ZCCHC11Q5TAX3 1644 aaKnown RBP18.5■□□□□ 0.55
HDLBP-231ENST00000467435 UHRF1BP1LA0JNW5 1464 aa18.49■□□□□ 0.55
HDLBP-231ENST00000467435 MIA2Q96PC5 1412 aa18.49■□□□□ 0.55
HDLBP-231ENST00000467435 ZEB1P37275 1124 aaPredicted RBP18.48■□□□□ 0.55
HDLBP-231ENST00000467435 ITGAEP38570 1179 aa18.48■□□□□ 0.55
HDLBP-231ENST00000467435 CCER1Q8TC90 406 aaPredicted RBP18.48■□□□□ 0.55
HDLBP-231ENST00000467435 CDC42BPAQ5VT25 1732 aa18.48■□□□□ 0.55
HDLBP-231ENST00000467435 OSCARQ8IYS5 282 aa18.46■□□□□ 0.55
HDLBP-231ENST00000467435 ABCC10Q5T3U5 1492 aa18.42■□□□□ 0.54
HDLBP-231ENST00000467435 KDM5BQ9UGL1 1544 aa18.41■□□□□ 0.54
HDLBP-231ENST00000467435 PLEKHD1A6NEE1 506 aa18.41■□□□□ 0.54
HDLBP-231ENST00000467435 DNMT1P26358 1616 aaKnown RBP18.41■□□□□ 0.54
HDLBP-231ENST00000467435 PREX2Q70Z35 1606 aa18.4■□□□□ 0.54
HDLBP-231ENST00000467435 GCC2Q8IWJ2 1684 aa18.4■□□□□ 0.54
HDLBP-231ENST00000467435 GPATCH8Q9UKJ3 1502 aaKnown RBP18.39■□□□□ 0.54
HDLBP-231ENST00000467435 CROCC2H7BZ55 1655 aa18.38■□□□□ 0.53
HDLBP-231ENST00000467435 CAMSAP2Q08AD1 1489 aa18.38■□□□□ 0.53
HDLBP-231ENST00000467435 SETD5Q9C0A6 1442 aa18.37■□□□□ 0.53
HDLBP-231ENST00000467435 TTC37Q6PGP7 1564 aa18.37■□□□□ 0.53
HDLBP-231ENST00000467435 MYO5CQ9NQX4 1742 aa18.37■□□□□ 0.53
HDLBP-231ENST00000467435 PTPRKQ15262 1439 aa18.36■□□□□ 0.53
HDLBP-231ENST00000467435 RAB3GAP2Q9H2M9 1393 aa18.36■□□□□ 0.53
HDLBP-231ENST00000467435 CDC42BPBQ9Y5S2 1711 aa18.36■□□□□ 0.53
HDLBP-231ENST00000467435 ADGBQ8N7X0 1667 aa18.34■□□□□ 0.53
HDLBP-231ENST00000467435 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms