RNA–Protein interactions for RNA: ENST00000467409.5

ABCC13-203, Transcript of ATP binding cassette subfamily C member 13 (pseudogene), humanhuman

TSL 1 (best)

Gene ABCC13, Length 2,747 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC13-203ENST00000467409 CARMIL1Q5VZK9 1371 aa18.01■□□□□ 0.47
ABCC13-203ENST00000467409 KANK4Q5T7N3 995 aaPredicted RBP18■□□□□ 0.47
ABCC13-203ENST00000467409 SLC24A1O60721 1099 aa17.99■□□□□ 0.47
ABCC13-203ENST00000467409 PDS5BQ9NTI5 1447 aa17.96■□□□□ 0.47
ABCC13-203ENST00000467409 CUL7Q14999 1698 aa17.93■□□□□ 0.46
ABCC13-203ENST00000467409 ABCA5Q8WWZ7 1642 aa17.92■□□□□ 0.46
ABCC13-203ENST00000467409 TARBP1Q13395 1621 aaKnown RBP17.86■□□□□ 0.45
ABCC13-203ENST00000467409 CTTNBP2Q8WZ74 1663 aa17.85■□□□□ 0.45
ABCC13-203ENST00000467409 TDRD9Q8NDG6 1382 aaKnown RBP17.81■□□□□ 0.44
ABCC13-203ENST00000467409 GAPVD1Q14C86 1478 aa17.8■□□□□ 0.44
ABCC13-203ENST00000467409 P3H3Q8IVL6 736 aa17.79■□□□□ 0.44
ABCC13-203ENST00000467409 ATP1B4Q9UN42 357 aaPredicted RBP17.78■□□□□ 0.44
ABCC13-203ENST00000467409 TIAM1Q13009 1591 aa17.77■□□□□ 0.43
ABCC13-203ENST00000467409 MRC2Q9UBG0 1479 aa17.76■□□□□ 0.43
ABCC13-203ENST00000467409 PCF11O94913 1555 aaKnown RBP17.76■□□□□ 0.43
ABCC13-203ENST00000467409 DHX57Q6P158 1386 aaKnown RBP17.75■□□□□ 0.43
ABCC13-203ENST00000467409 PBRM1Q86U86 1689 aa17.75■□□□□ 0.43
ABCC13-203ENST00000467409 EFCAB5A4FU69 1503 aa17.75■□□□□ 0.43
ABCC13-203ENST00000467409 MAP3K1Q13233 1512 aa17.75■□□□□ 0.43
ABCC13-203ENST00000467409 CFAP43Q8NDM7 1665 aa17.73■□□□□ 0.43
ABCC13-203ENST00000467409 RRBP1Q9P2E9 1410 aaKnown RBP17.73■□□□□ 0.43
ABCC13-203ENST00000467409 FHOD3Q2V2M9 1422 aa17.71■□□□□ 0.43
ABCC13-203ENST00000467409 FHAD1B1AJZ9 1412 aa17.69■□□□□ 0.42
ABCC13-203ENST00000467409 WDR62O43379 1518 aa17.69■□□□□ 0.42
ABCC13-203ENST00000467409 SAMD9Q5K651 1589 aa17.68■□□□□ 0.42
ABCC13-203ENST00000467409 KCNH8Q96L42 1107 aa17.67■□□□□ 0.42
ABCC13-203ENST00000467409 LRRC9Q6ZRR7 1453 aa17.67■□□□□ 0.42
ABCC13-203ENST00000467409 ADAMTS12P58397 1594 aa17.65■□□□□ 0.42
ABCC13-203ENST00000467409 AQRO60306 1485 aaKnown RBP eCLIP17.65■□□□□ 0.42
ABCC13-203ENST00000467409 FYCO1Q9BQS8 1478 aa17.64■□□□□ 0.41
ABCC13-203ENST00000467409 HIRIP3Q9BW71 556 aaPredicted RBP17.64■□□□□ 0.41
ABCC13-203ENST00000467409 FAM50AQ14320 339 aaKnown RBP17.62■□□□□ 0.41
ABCC13-203ENST00000467409 CASKIN1Q8WXD9 1431 aa17.62■□□□□ 0.41
ABCC13-203ENST00000467409 SNAPC4Q5SXM2 1469 aa17.61■□□□□ 0.41
ABCC13-203ENST00000467409 CCNB3Q8WWL7 1395 aa17.61■□□□□ 0.41
ABCC13-203ENST00000467409 LRRIQ1Q96JM4 1722 aa17.61■□□□□ 0.41
ABCC13-203ENST00000467409 ZNF608Q9ULD9 1512 aaPredicted RBP17.6■□□□□ 0.41
ABCC13-203ENST00000467409 IFT140Q96RY7 1462 aa17.59■□□□□ 0.41
ABCC13-203ENST00000467409 SIN3AQ96ST3 1273 aa17.59■□□□□ 0.41
ABCC13-203ENST00000467409 THOC2Q8NI27 1593 aaKnown RBP17.58■□□□□ 0.41
ABCC13-203ENST00000467409 GRIN2BQ13224 1484 aa17.57■□□□□ 0.4
ABCC13-203ENST00000467409 PHLDB1Q86UU1 1377 aa17.57■□□□□ 0.4
ABCC13-203ENST00000467409 FMN1Q68DA7 1419 aa17.56■□□□□ 0.4
ABCC13-203ENST00000467409 EIF4G3O43432 1585 aaKnown RBP17.53■□□□□ 0.4
ABCC13-203ENST00000467409 RAB3GAP2Q9H2M9 1393 aa17.53■□□□□ 0.4
ABCC13-203ENST00000467409 IQGAP2Q13576 1575 aa17.52■□□□□ 0.4
ABCC13-203ENST00000467409 ERCC6Q03468 1493 aa17.51■□□□□ 0.39
ABCC13-203ENST00000467409 MYT1Q01538 1121 aa17.49■□□□□ 0.39
ABCC13-203ENST00000467409 DDX10Q13206 875 aaKnown RBP17.47■□□□□ 0.39
ABCC13-203ENST00000467409 BCANQ96GW7 911 aa17.47■□□□□ 0.39
ABCC13-203ENST00000467409 SUPT16HQ9Y5B9 1047 aaKnown RBP17.43■□□□□ 0.38
ABCC13-203ENST00000467409 UGGT2Q9NYU1 1516 aa17.43■□□□□ 0.38
ABCC13-203ENST00000467409 MAPKBP1O60336 1514 aa17.4■□□□□ 0.38
ABCC13-203ENST00000467409 MAGI3Q5TCQ9 1506 aa17.4■□□□□ 0.38
ABCC13-203ENST00000467409 CLSPNQ9HAW4 1339 aa17.4■□□□□ 0.38
ABCC13-203ENST00000467409 GRIN2AQ12879 1464 aa17.4■□□□□ 0.38
ABCC13-203ENST00000467409 HECW1Q76N89 1606 aa17.38■□□□□ 0.37
ABCC13-203ENST00000467409 EHBP1L1Q8N3D4 1523 aa17.37■□□□□ 0.37
ABCC13-203ENST00000467409 KIAA0586Q9BVV6 1533 aa17.37■□□□□ 0.37
ABCC13-203ENST00000467409 SUPT6HQ7KZ85 1726 aaKnown RBP17.37■□□□□ 0.37
ABCC13-203ENST00000467409 FGD6Q6ZV73 1430 aa17.37■□□□□ 0.37
ABCC13-203ENST00000467409 KIAA0556O60303 1618 aa17.36■□□□□ 0.37
ABCC13-203ENST00000467409 ARID3CA6NKF2 412 aa17.36■□□□□ 0.37
ABCC13-203ENST00000467409 MTUS2Q5JR59 1369 aa17.36■□□□□ 0.37
ABCC13-203ENST00000467409 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.36■□□□□ 0.37
ABCC13-203ENST00000467409 DISP1Q96F81 1524 aa17.36■□□□□ 0.37
ABCC13-203ENST00000467409 MAGI1Q96QZ7 1491 aaPredicted RBP17.36■□□□□ 0.37
ABCC13-203ENST00000467409 NCOA2Q15596 1464 aa17.35■□□□□ 0.37
ABCC13-203ENST00000467409 CCDC18Q5T9S5 1454 aa17.35■□□□□ 0.37
ABCC13-203ENST00000467409 ARHGEF11O15085 1522 aa17.35■□□□□ 0.37
ABCC13-203ENST00000467409 SETD5Q9C0A6 1442 aa17.34■□□□□ 0.37
ABCC13-203ENST00000467409 CEP170Q5SW79 1584 aa17.34■□□□□ 0.37
ABCC13-203ENST00000467409 EPRSP07814 1512 aaKnown RBP17.33■□□□□ 0.36
ABCC13-203ENST00000467409 SYNJ2O15056 1496 aa17.31■□□□□ 0.36
ABCC13-203ENST00000467409 CDK13Q14004 1512 aaKnown RBP17.31■□□□□ 0.36
ABCC13-203ENST00000467409 MYOM3Q5VTT5 1437 aa17.3■□□□□ 0.36
ABCC13-203ENST00000467409 TRIM52Q96A61 297 aa17.3■□□□□ 0.36
ABCC13-203ENST00000467409 PTPRKQ15262 1439 aa17.27■□□□□ 0.36
ABCC13-203ENST00000467409 PTPN23Q9H3S7 1636 aa17.27■□□□□ 0.35
ABCC13-203ENST00000467409 RAPGEF6Q8TEU7 1601 aa17.25■□□□□ 0.35
ABCC13-203ENST00000467409 CHIC2Q9UKJ5 165 aa17.24■□□□□ 0.35
ABCC13-203ENST00000467409 NUP160Q12769 1436 aa17.24■□□□□ 0.35
ABCC13-203ENST00000467409 NUP153P49790 1475 aaKnown RBP17.23■□□□□ 0.35
ABCC13-203ENST00000467409 FKBP8Q14318 412 aa17.22■□□□□ 0.35
ABCC13-203ENST00000467409 CHMP7Q8WUX9 453 aaPredicted RBP17.22■□□□□ 0.35
ABCC13-203ENST00000467409 TCOF1Q13428 1488 aaKnown RBP17.21■□□□□ 0.35
ABCC13-203ENST00000467409 RRP7BPQ9NSQ0 103 aa17.19■□□□□ 0.34
ABCC13-203ENST00000467409 HFM1A2PYH4 1435 aa17.18■□□□□ 0.34
ABCC13-203ENST00000467409 TSHZ2Q9NRE2 1034 aa17.18■□□□□ 0.34
ABCC13-203ENST00000467409 PPP1R15AO75807 674 aaPredicted RBP17.17■□□□□ 0.34
ABCC13-203ENST00000467409 FBLN2P98095 1184 aa17.16■□□□□ 0.34
ABCC13-203ENST00000467409 NAIPQ13075 1403 aa17.14■□□□□ 0.33
ABCC13-203ENST00000467409 FOXD1Q16676 465 aa17.14■□□□□ 0.33
ABCC13-203ENST00000467409 PLB1Q6P1J6 1458 aa17.14■□□□□ 0.33
ABCC13-203ENST00000467409 GCC2Q8IWJ2 1684 aa17.12■□□□□ 0.33
ABCC13-203ENST00000467409 MIA2Q96PC5 1412 aa17.12■□□□□ 0.33
ABCC13-203ENST00000467409 CNGB1Q14028 1251 aaPredicted RBP17.12■□□□□ 0.33
ABCC13-203ENST00000467409 IRX6P78412 446 aaPredicted RBP17.12■□□□□ 0.33
ABCC13-203ENST00000467409 TONSLQ96HA7 1378 aa17.11■□□□□ 0.33
ABCC13-203ENST00000467409 JPH4Q96JJ6 628 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms