RNA–Protein interactions for RNA: ENST00000467329.5

PRPF3-202, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 5

Gene PRPF3, Length 2,595 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-202ENST00000467329 ARHGAP35Q9NRY4 1499 aa14.88□□□□□ -0.03
PRPF3-202ENST00000467329 SYNJ2O15056 1496 aa14.86□□□□□ -0.03
PRPF3-202ENST00000467329 GRIN2AQ12879 1464 aa14.84□□□□□ -0.03
PRPF3-202ENST00000467329 SAMD9Q5K651 1589 aa14.82□□□□□ -0.04
PRPF3-202ENST00000467329 IQGAP2Q13576 1575 aa14.81□□□□□ -0.04
PRPF3-202ENST00000467329 KIAA0586Q9BVV6 1533 aa14.79□□□□□ -0.04
PRPF3-202ENST00000467329 UGGT2Q9NYU1 1516 aa14.77□□□□□ -0.04
PRPF3-202ENST00000467329 NUP160Q12769 1436 aa14.77□□□□□ -0.05
PRPF3-202ENST00000467329 TRIM26Q12899 539 aaPredicted RBP14.75□□□□□ -0.05
PRPF3-202ENST00000467329 CEP170Q5SW79 1584 aa14.74□□□□□ -0.05
PRPF3-202ENST00000467329 MAP3K1Q13233 1512 aa14.74□□□□□ -0.05
PRPF3-202ENST00000467329 RANGAP1P46060 587 aaPredicted RBP14.74□□□□□ -0.05
PRPF3-202ENST00000467329 CHMP7Q8WUX9 453 aaPredicted RBP14.72□□□□□ -0.05
PRPF3-202ENST00000467329 FMN1Q68DA7 1419 aa14.71□□□□□ -0.05
PRPF3-202ENST00000467329 FYCO1Q9BQS8 1478 aa14.7□□□□□ -0.06
PRPF3-202ENST00000467329 FHOD3Q2V2M9 1422 aa14.7□□□□□ -0.06
PRPF3-202ENST00000467329 CASKIN1Q8WXD9 1431 aa14.69□□□□□ -0.06
PRPF3-202ENST00000467329 PCF11O94913 1555 aaKnown RBP14.68□□□□□ -0.06
PRPF3-202ENST00000467329 APLP2Q06481 763 aa14.68□□□□□ -0.06
PRPF3-202ENST00000467329 CHD1O14646 1710 aa14.68□□□□□ -0.06
PRPF3-202ENST00000467329 KIAA0556O60303 1618 aa14.67□□□□□ -0.06
PRPF3-202ENST00000467329 CFAP43Q8NDM7 1665 aa14.66□□□□□ -0.06
PRPF3-202ENST00000467329 TIAM1Q13009 1591 aa14.65□□□□□ -0.06
PRPF3-202ENST00000467329 DISP1Q96F81 1524 aa14.64□□□□□ -0.07
PRPF3-202ENST00000467329 PCGF6Q9BYE7 350 aa14.62□□□□□ -0.07
PRPF3-202ENST00000467329 FBLN2P98095 1184 aa14.6□□□□□ -0.07
PRPF3-202ENST00000467329 P3H3Q8IVL6 736 aa14.6□□□□□ -0.07
PRPF3-202ENST00000467329 CARMIL2Q6F5E8 1435 aa14.59□□□□□ -0.07
PRPF3-202ENST00000467329 SHROOM2Q13796 1616 aa14.59□□□□□ -0.07
PRPF3-202ENST00000467329 HECW1Q76N89 1606 aa14.58□□□□□ -0.07
PRPF3-202ENST00000467329 CCDC18Q5T9S5 1454 aa14.57□□□□□ -0.08
PRPF3-202ENST00000467329 PPARGC1BQ86YN6 1023 aaKnown RBP14.57□□□□□ -0.08
PRPF3-202ENST00000467329 CLASP1Q7Z460 1538 aa14.56□□□□□ -0.08
PRPF3-202ENST00000467329 LRRC9Q6ZRR7 1453 aa14.56□□□□□ -0.08
PRPF3-202ENST00000467329 JPH4Q96JJ6 628 aa14.55□□□□□ -0.08
PRPF3-202ENST00000467329 LRRIQ1Q96JM4 1722 aa14.53□□□□□ -0.08
PRPF3-202ENST00000467329 RAPGEF6Q8TEU7 1601 aa14.52□□□□□ -0.09
PRPF3-202ENST00000467329 KANK4Q5T7N3 995 aaPredicted RBP14.51□□□□□ -0.09
PRPF3-202ENST00000467329 PRG4Q92954 1404 aaPredicted RBP14.49□□□□□ -0.09
PRPF3-202ENST00000467329 EHBP1L1Q8N3D4 1523 aa14.49□□□□□ -0.09
PRPF3-202ENST00000467329 EPRSP07814 1512 aaKnown RBP14.48□□□□□ -0.09
PRPF3-202ENST00000467329 RRBP1Q9P2E9 1410 aaKnown RBP14.48□□□□□ -0.09
PRPF3-202ENST00000467329 ABCA8O94911 1581 aa14.47□□□□□ -0.09
PRPF3-202ENST00000467329 NUP153P49790 1475 aaKnown RBP14.45□□□□□ -0.1
PRPF3-202ENST00000467329 TTBK1Q5TCY1 1321 aaPredicted RBP14.45□□□□□ -0.1
PRPF3-202ENST00000467329 ATP1B4Q9UN42 357 aaPredicted RBP14.43□□□□□ -0.1
PRPF3-202ENST00000467329 SUPT6HQ7KZ85 1726 aaKnown RBP14.43□□□□□ -0.1
PRPF3-202ENST00000467329 MTUS2Q5JR59 1369 aa14.42□□□□□ -0.1
PRPF3-202ENST00000467329 ARHGEF11O15085 1522 aa14.41□□□□□ -0.1
PRPF3-202ENST00000467329 PTPRGP23470 1445 aa14.41□□□□□ -0.1
PRPF3-202ENST00000467329 PLB1Q6P1J6 1458 aa14.4□□□□□ -0.1
PRPF3-202ENST00000467329 CDK13Q14004 1512 aaKnown RBP14.4□□□□□ -0.1
PRPF3-202ENST00000467329 MAGI3Q5TCQ9 1506 aa14.39□□□□□ -0.11
PRPF3-202ENST00000467329 CCNB3Q8WWL7 1395 aa14.39□□□□□ -0.11
PRPF3-202ENST00000467329 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.38□□□□□ -0.11
PRPF3-202ENST00000467329 PHLDB1Q86UU1 1377 aa14.38□□□□□ -0.11
PRPF3-202ENST00000467329 NCOA2Q15596 1464 aa14.37□□□□□ -0.11
PRPF3-202ENST00000467329 ERCC6L2Q5T890 1561 aa14.36□□□□□ -0.11
PRPF3-202ENST00000467329 ADCY10Q96PN6 1610 aa14.35□□□□□ -0.11
PRPF3-202ENST00000467329 UACAQ9BZF9 1416 aa14.35□□□□□ -0.11
PRPF3-202ENST00000467329 CDK11AQ9UQ88 783 aaPredicted RBP14.34□□□□□ -0.11
PRPF3-202ENST00000467329 UHRF1BP1LA0JNW5 1464 aa14.34□□□□□ -0.11
PRPF3-202ENST00000467329 ABCC2Q92887 1545 aa14.34□□□□□ -0.11
PRPF3-202ENST00000467329 TROQ12816 1431 aaPredicted RBP14.33□□□□□ -0.12
PRPF3-202ENST00000467329 MYOM3Q5VTT5 1437 aa14.33□□□□□ -0.12
PRPF3-202ENST00000467329 FGD6Q6ZV73 1430 aa14.32□□□□□ -0.12
PRPF3-202ENST00000467329 OSCARQ8IYS5 282 aa14.32□□□□□ -0.12
PRPF3-202ENST00000467329 ATP10BO94823 1461 aa14.32□□□□□ -0.12
PRPF3-202ENST00000467329 MIA2Q96PC5 1412 aa14.29□□□□□ -0.12
PRPF3-202ENST00000467329 TCOF1Q13428 1488 aaKnown RBP14.29□□□□□ -0.12
PRPF3-202ENST00000467329 HRCP23327 699 aa14.28□□□□□ -0.12
PRPF3-202ENST00000467329 ITSN2Q9NZM3 1697 aa14.26□□□□□ -0.13
PRPF3-202ENST00000467329 KIF14Q15058 1648 aa14.26□□□□□ -0.13
PRPF3-202ENST00000467329 PTPN23Q9H3S7 1636 aa14.26□□□□□ -0.13
PRPF3-202ENST00000467329 KDM5BQ9UGL1 1544 aa14.25□□□□□ -0.13
PRPF3-202ENST00000467329 HNRNPUL2Q1KMD3 747 aaKnown RBP14.23□□□□□ -0.13
PRPF3-202ENST00000467329 PLEKHD1A6NEE1 506 aa14.22□□□□□ -0.13
PRPF3-202ENST00000467329 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.22□□□□□ -0.13
PRPF3-202ENST00000467329 ABCC10Q5T3U5 1492 aa14.22□□□□□ -0.13
PRPF3-202ENST00000467329 ZCCHC11Q5TAX3 1644 aaKnown RBP14.22□□□□□ -0.13
PRPF3-202ENST00000467329 ARID3CA6NKF2 412 aa14.21□□□□□ -0.13
PRPF3-202ENST00000467329 ZEB1P37275 1124 aaPredicted RBP14.21□□□□□ -0.13
PRPF3-202ENST00000467329 FAM50AQ14320 339 aaKnown RBP14.19□□□□□ -0.14
PRPF3-202ENST00000467329 GPATCH8Q9UKJ3 1502 aaKnown RBP14.18□□□□□ -0.14
PRPF3-202ENST00000467329 CDC42BPAQ5VT25 1732 aa14.16□□□□□ -0.14
PRPF3-202ENST00000467329 AKNAQ7Z591 1439 aa14.15□□□□□ -0.14
PRPF3-202ENST00000467329 DNMT1P26358 1616 aaKnown RBP14.14□□□□□ -0.15
PRPF3-202ENST00000467329 PREX2Q70Z35 1606 aa14.14□□□□□ -0.15
PRPF3-202ENST00000467329 SETD5Q9C0A6 1442 aa14.13□□□□□ -0.15
PRPF3-202ENST00000467329 CAMSAP2Q08AD1 1489 aa14.12□□□□□ -0.15
PRPF3-202ENST00000467329 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.11□□□□□ -0.15
PRPF3-202ENST00000467329 CCER1Q8TC90 406 aaPredicted RBP14.11□□□□□ -0.15
PRPF3-202ENST00000467329 HFM1A2PYH4 1435 aa14.11□□□□□ -0.15
PRPF3-202ENST00000467329 PTPRKQ15262 1439 aa14.1□□□□□ -0.15
PRPF3-202ENST00000467329 TTC37Q6PGP7 1564 aa14.1□□□□□ -0.15
PRPF3-202ENST00000467329 WDR7Q9Y4E6 1490 aa14.09□□□□□ -0.15
PRPF3-202ENST00000467329 MYO5CQ9NQX4 1742 aa14.09□□□□□ -0.15
PRPF3-202ENST00000467329 DAPK1P53355 1430 aa14.09□□□□□ -0.15
PRPF3-202ENST00000467329 GCC2Q8IWJ2 1684 aa14.09□□□□□ -0.15
PRPF3-202ENST00000467329 CFDP1Q9UEE9 299 aaPredicted RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms