RNA–Protein interactions for RNA: ENST00000467302.5

PRPF38B-204, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best)

Gene PRPF38B, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-204ENST00000467302 TDRD9Q8NDG6 1382 aaKnown RBP22.12■■□□□ 1.13
PRPF38B-204ENST00000467302 CTTNBP2Q8WZ74 1663 aa22.12■■□□□ 1.13
PRPF38B-204ENST00000467302 NEUROD1Q13562 356 aa22.11■■□□□ 1.13
PRPF38B-204ENST00000467302 PBRM1Q86U86 1689 aa22.08■■□□□ 1.13
PRPF38B-204ENST00000467302 ZNF316A6NFI3 1004 aaPredicted RBP22.06■■□□□ 1.12
PRPF38B-204ENST00000467302 ERCC6Q03468 1493 aa22.05■■□□□ 1.12
PRPF38B-204ENST00000467302 IFT140Q96RY7 1462 aa22.05■■□□□ 1.12
PRPF38B-204ENST00000467302 EFCAB5A4FU69 1503 aa22.03■■□□□ 1.12
PRPF38B-204ENST00000467302 THOC2Q8NI27 1593 aaKnown RBP22.02■■□□□ 1.12
PRPF38B-204ENST00000467302 CENPBP07199 599 aaPredicted RBP21.99■■□□□ 1.11
PRPF38B-204ENST00000467302 HNRNPUL2Q1KMD3 747 aaKnown RBP21.99■■□□□ 1.11
PRPF38B-204ENST00000467302 ADAMTS12P58397 1594 aa21.97■■□□□ 1.11
PRPF38B-204ENST00000467302 GRIN2BQ13224 1484 aa21.95■■□□□ 1.1
PRPF38B-204ENST00000467302 FHAD1B1AJZ9 1412 aa21.94■■□□□ 1.1
PRPF38B-204ENST00000467302 AQRO60306 1485 aaKnown RBP eCLIP21.93■■□□□ 1.11e-8■■■■■ 31.9
PRPF38B-204ENST00000467302 MAP3K1Q13233 1512 aa21.92■■□□□ 1.1
PRPF38B-204ENST00000467302 ZNF608Q9ULD9 1512 aaPredicted RBP21.89■■□□□ 1.09
PRPF38B-204ENST00000467302 SAMD9Q5K651 1589 aa21.89■■□□□ 1.09
PRPF38B-204ENST00000467302 EIF4G3O43432 1585 aaKnown RBP21.88■■□□□ 1.09
PRPF38B-204ENST00000467302 GTF3C3Q9Y5Q9 886 aa21.87■■□□□ 1.09
PRPF38B-204ENST00000467302 PCF11O94913 1555 aaKnown RBP21.87■■□□□ 1.09
PRPF38B-204ENST00000467302 TIAM1Q13009 1591 aa21.87■■□□□ 1.09
PRPF38B-204ENST00000467302 KANK4Q5T7N3 995 aaPredicted RBP21.85■■□□□ 1.09
PRPF38B-204ENST00000467302 FHOD3Q2V2M9 1422 aa21.85■■□□□ 1.09
PRPF38B-204ENST00000467302 CFAP43Q8NDM7 1665 aa21.85■■□□□ 1.09
PRPF38B-204ENST00000467302 FYCO1Q9BQS8 1478 aa21.83■■□□□ 1.09
PRPF38B-204ENST00000467302 P3H3Q8IVL6 736 aa21.8■■□□□ 1.08
PRPF38B-204ENST00000467302 FMN1Q68DA7 1419 aa21.8■■□□□ 1.08
PRPF38B-204ENST00000467302 CASKIN1Q8WXD9 1431 aa21.78■■□□□ 1.08
PRPF38B-204ENST00000467302 IQGAP2Q13576 1575 aa21.78■■□□□ 1.08
PRPF38B-204ENST00000467302 SNAPC4Q5SXM2 1469 aa21.78■■□□□ 1.08
PRPF38B-204ENST00000467302 CLSPNQ9HAW4 1339 aa21.76■■□□□ 1.07
PRPF38B-204ENST00000467302 MAGI1Q96QZ7 1491 aaPredicted RBP21.74■■□□□ 1.07
PRPF38B-204ENST00000467302 LRRC9Q6ZRR7 1453 aa21.74■■□□□ 1.07
PRPF38B-204ENST00000467302 MIER1Q8N108 512 aa21.73■■□□□ 1.07
PRPF38B-204ENST00000467302 RRBP1Q9P2E9 1410 aaKnown RBP21.73■■□□□ 1.07
PRPF38B-204ENST00000467302 DHX57Q6P158 1386 aaKnown RBP21.7■■□□□ 1.06
PRPF38B-204ENST00000467302 GRIN2AQ12879 1464 aa21.69■■□□□ 1.06
PRPF38B-204ENST00000467302 UGGT2Q9NYU1 1516 aa21.67■■□□□ 1.06
PRPF38B-204ENST00000467302 ATP1B4Q9UN42 357 aaPredicted RBP21.66■■□□□ 1.06
PRPF38B-204ENST00000467302 KIAA0586Q9BVV6 1533 aa21.65■■□□□ 1.06
PRPF38B-204ENST00000467302 SYNJ2O15056 1496 aa21.65■■□□□ 1.06
PRPF38B-204ENST00000467302 CCNB3Q8WWL7 1395 aa21.63■■□□□ 1.05
PRPF38B-204ENST00000467302 YTHDC1Q96MU7 727 aaKnown RBP21.61■■□□□ 1.05
PRPF38B-204ENST00000467302 LRRIQ1Q96JM4 1722 aa21.6■■□□□ 1.05
PRPF38B-204ENST00000467302 HECW1Q76N89 1606 aa21.58■■□□□ 1.04
PRPF38B-204ENST00000467302 KIAA0556O60303 1618 aa21.57■■□□□ 1.04
PRPF38B-204ENST00000467302 CEP170Q5SW79 1584 aa21.56■■□□□ 1.04
PRPF38B-204ENST00000467302 CCDC18Q5T9S5 1454 aa21.55■■□□□ 1.04
PRPF38B-204ENST00000467302 PHLDB1Q86UU1 1377 aa21.54■■□□□ 1.04
PRPF38B-204ENST00000467302 CHMP7Q8WUX9 453 aaPredicted RBP21.53■■□□□ 1.04
PRPF38B-204ENST00000467302 DISP1Q96F81 1524 aa21.52■■□□□ 1.04
PRPF38B-204ENST00000467302 NUP160Q12769 1436 aa21.51■■□□□ 1.03
PRPF38B-204ENST00000467302 EHBP1L1Q8N3D4 1523 aa21.51■■□□□ 1.03
PRPF38B-204ENST00000467302 MTUS2Q5JR59 1369 aa21.49■■□□□ 1.03
PRPF38B-204ENST00000467302 SUPT6HQ7KZ85 1726 aaKnown RBP21.46■■□□□ 1.03
PRPF38B-204ENST00000467302 EPRSP07814 1512 aaKnown RBP21.44■■□□□ 1.02
PRPF38B-204ENST00000467302 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.43■■□□□ 1.02
PRPF38B-204ENST00000467302 ITGAEP38570 1179 aa21.42■■□□□ 1.02
PRPF38B-204ENST00000467302 FBLN2P98095 1184 aa21.41■■□□□ 1.02
PRPF38B-204ENST00000467302 RAPGEF6Q8TEU7 1601 aa21.4■■□□□ 1.02
PRPF38B-204ENST00000467302 NCOA2Q15596 1464 aa21.4■■□□□ 1.02
PRPF38B-204ENST00000467302 MAGI3Q5TCQ9 1506 aa21.39■■□□□ 1.01
PRPF38B-204ENST00000467302 FGD6Q6ZV73 1430 aa21.38■■□□□ 1.01
PRPF38B-204ENST00000467302 ARHGEF11O15085 1522 aa21.38■■□□□ 1.01
PRPF38B-204ENST00000467302 FAM50AQ14320 339 aaKnown RBP21.38■■□□□ 1.01
PRPF38B-204ENST00000467302 CARMIL2Q6F5E8 1435 aa21.37■■□□□ 1.01
PRPF38B-204ENST00000467302 CDK13Q14004 1512 aaKnown RBP21.36■■□□□ 1.01
PRPF38B-204ENST00000467302 RAB3GAP2Q9H2M9 1393 aa21.35■■□□□ 1.01
PRPF38B-204ENST00000467302 CHD1O14646 1710 aa21.35■■□□□ 1.01
PRPF38B-204ENST00000467302 MYOM3Q5VTT5 1437 aa21.35■■□□□ 1.01
PRPF38B-204ENST00000467302 MAPKBP1O60336 1514 aa21.32■■□□□ 1
PRPF38B-204ENST00000467302 NUP153P49790 1475 aaKnown RBP21.32■■□□□ 1
PRPF38B-204ENST00000467302 JPH4Q96JJ6 628 aa21.3■■□□□ 1
PRPF38B-204ENST00000467302 SETD5Q9C0A6 1442 aa21.28■■□□□ 1
PRPF38B-204ENST00000467302 PTPN23Q9H3S7 1636 aa21.27■■□□□ 1
PRPF38B-204ENST00000467302 TCOF1Q13428 1488 aaKnown RBP21.23■□□□□ 0.99
PRPF38B-204ENST00000467302 PLB1Q6P1J6 1458 aa21.22■□□□□ 0.99
PRPF38B-204ENST00000467302 ABCA8O94911 1581 aa21.21■□□□□ 0.99
PRPF38B-204ENST00000467302 SHROOM2Q13796 1616 aa21.21■□□□□ 0.99
PRPF38B-204ENST00000467302 MIA2Q96PC5 1412 aa21.2■□□□□ 0.98
PRPF38B-204ENST00000467302 ARID3CA6NKF2 412 aa21.19■□□□□ 0.98
PRPF38B-204ENST00000467302 CDK11AQ9UQ88 783 aaPredicted RBP21.19■□□□□ 0.98
PRPF38B-204ENST00000467302 PRG4Q92954 1404 aaPredicted RBP21.17■□□□□ 0.98
PRPF38B-204ENST00000467302 ADCY10Q96PN6 1610 aa21.16■□□□□ 0.98
PRPF38B-204ENST00000467302 TROQ12816 1431 aaPredicted RBP21.15■□□□□ 0.98
PRPF38B-204ENST00000467302 HFM1A2PYH4 1435 aa21.13■□□□□ 0.97
PRPF38B-204ENST00000467302 PTPRKQ15262 1439 aa21.12■□□□□ 0.97
PRPF38B-204ENST00000467302 ITSN2Q9NZM3 1697 aa21.11■□□□□ 0.97
PRPF38B-204ENST00000467302 TIMELESSQ9UNS1 1208 aa21.1■□□□□ 0.97
PRPF38B-204ENST00000467302 SUPT16HQ9Y5B9 1047 aaKnown RBP21.09■□□□□ 0.97
PRPF38B-204ENST00000467302 PTPRGP23470 1445 aa21.08■□□□□ 0.97
PRPF38B-204ENST00000467302 CLASP1Q7Z460 1538 aa21.08■□□□□ 0.96
PRPF38B-204ENST00000467302 SIN3AQ96ST3 1273 aa21.07■□□□□ 0.96
PRPF38B-204ENST00000467302 GCC2Q8IWJ2 1684 aa21.07■□□□□ 0.96
PRPF38B-204ENST00000467302 AKNAQ7Z591 1439 aa21.06■□□□□ 0.96
PRPF38B-204ENST00000467302 KIF14Q15058 1648 aa21.06■□□□□ 0.96
PRPF38B-204ENST00000467302 MYT1Q01538 1121 aa21.05■□□□□ 0.96
PRPF38B-204ENST00000467302 NAIPQ13075 1403 aa21.04■□□□□ 0.96
PRPF38B-204ENST00000467302 ATP10BO94823 1461 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 281 ms