RNA–Protein interactions for RNA: ENST00000467246.5

HPS1-208, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best)

Gene HPS1, Length 2,791 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-208ENST00000467246 FHAD1B1AJZ9 1412 aa17.11■□□□□ 0.33
HPS1-208ENST00000467246 TARBP1Q13395 1621 aaKnown RBP17.11■□□□□ 0.33
HPS1-208ENST00000467246 ATP1B4Q9UN42 357 aaPredicted RBP17.1■□□□□ 0.33
HPS1-208ENST00000467246 MAP3K1Q13233 1512 aa17.09■□□□□ 0.33
HPS1-208ENST00000467246 SCAF1Q9H7N4 1312 aaKnown RBP17.09■□□□□ 0.33
HPS1-208ENST00000467246 CTTNBP2Q8WZ74 1663 aa17.08■□□□□ 0.33
HPS1-208ENST00000467246 CCNB3Q8WWL7 1395 aa17.08■□□□□ 0.32
HPS1-208ENST00000467246 PCF11O94913 1555 aaKnown RBP17.08■□□□□ 0.32
HPS1-208ENST00000467246 EFCAB5A4FU69 1503 aa17.07■□□□□ 0.32
HPS1-208ENST00000467246 LRRC9Q6ZRR7 1453 aa17.07■□□□□ 0.32
HPS1-208ENST00000467246 MRC2Q9UBG0 1479 aa17.07■□□□□ 0.32
HPS1-208ENST00000467246 AQRO60306 1485 aaKnown RBP eCLIP17.04■□□□□ 0.327e-7■■■■■ 30.1
HPS1-208ENST00000467246 ITGAEP38570 1179 aa17.03■□□□□ 0.32
HPS1-208ENST00000467246 CASKIN1Q8WXD9 1431 aa17.01■□□□□ 0.31
HPS1-208ENST00000467246 PHLDB1Q86UU1 1377 aa17■□□□□ 0.31
HPS1-208ENST00000467246 FYCO1Q9BQS8 1478 aa17■□□□□ 0.31
HPS1-208ENST00000467246 CFAP43Q8NDM7 1665 aa16.99■□□□□ 0.31
HPS1-208ENST00000467246 DHX57Q6P158 1386 aaKnown RBP16.98■□□□□ 0.31
HPS1-208ENST00000467246 FMN1Q68DA7 1419 aa16.98■□□□□ 0.31
HPS1-208ENST00000467246 PBRM1Q86U86 1689 aa16.96■□□□□ 0.31
HPS1-208ENST00000467246 SAMD9Q5K651 1589 aa16.96■□□□□ 0.31
HPS1-208ENST00000467246 SNAPC4Q5SXM2 1469 aa16.95■□□□□ 0.3
HPS1-208ENST00000467246 ZNF608Q9ULD9 1512 aaPredicted RBP16.94■□□□□ 0.3
HPS1-208ENST00000467246 WDR62O43379 1518 aa16.94■□□□□ 0.3
HPS1-208ENST00000467246 DIEXFQ68CQ4 756 aaKnown RBP16.94■□□□□ 0.3
HPS1-208ENST00000467246 GRIN2BQ13224 1484 aa16.93■□□□□ 0.3
HPS1-208ENST00000467246 FAM50AQ14320 339 aaKnown RBP16.92■□□□□ 0.3
HPS1-208ENST00000467246 IFT140Q96RY7 1462 aa16.92■□□□□ 0.3
HPS1-208ENST00000467246 ZNF316A6NFI3 1004 aaPredicted RBP16.92■□□□□ 0.3
HPS1-208ENST00000467246 ADAMTS12P58397 1594 aa16.91■□□□□ 0.3
HPS1-208ENST00000467246 CLSPNQ9HAW4 1339 aa16.9■□□□□ 0.3
HPS1-208ENST00000467246 PELP1Q8IZL8 1130 aaKnown RBP16.9■□□□□ 0.3
HPS1-208ENST00000467246 ERCC6Q03468 1493 aa16.89■□□□□ 0.29
HPS1-208ENST00000467246 RAB3GAP2Q9H2M9 1393 aa16.87■□□□□ 0.29
HPS1-208ENST00000467246 MTUS2Q5JR59 1369 aa16.85■□□□□ 0.29
HPS1-208ENST00000467246 IQGAP2Q13576 1575 aa16.85■□□□□ 0.29
HPS1-208ENST00000467246 LRRIQ1Q96JM4 1722 aa16.84■□□□□ 0.29
HPS1-208ENST00000467246 SETD5Q9C0A6 1442 aa16.82■□□□□ 0.28
HPS1-208ENST00000467246 EIF4G3O43432 1585 aaKnown RBP16.79■□□□□ 0.28
HPS1-208ENST00000467246 FGD6Q6ZV73 1430 aa16.79■□□□□ 0.28
HPS1-208ENST00000467246 THOC2Q8NI27 1593 aaKnown RBP16.79■□□□□ 0.28
HPS1-208ENST00000467246 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.77■□□□□ 0.28
HPS1-208ENST00000467246 NCOA2Q15596 1464 aa16.77■□□□□ 0.27
HPS1-208ENST00000467246 UGGT2Q9NYU1 1516 aa16.75■□□□□ 0.27
HPS1-208ENST00000467246 MAGI3Q5TCQ9 1506 aa16.75■□□□□ 0.27
HPS1-208ENST00000467246 KIAA0586Q9BVV6 1533 aa16.75■□□□□ 0.27
HPS1-208ENST00000467246 GRIN2AQ12879 1464 aa16.75■□□□□ 0.27
HPS1-208ENST00000467246 ARID3CA6NKF2 412 aa16.74■□□□□ 0.27
HPS1-208ENST00000467246 MAPKBP1O60336 1514 aa16.73■□□□□ 0.27
HPS1-208ENST00000467246 EHBP1L1Q8N3D4 1523 aa16.73■□□□□ 0.27
HPS1-208ENST00000467246 CCDC18Q5T9S5 1454 aa16.72■□□□□ 0.27
HPS1-208ENST00000467246 MYOM3Q5VTT5 1437 aa16.72■□□□□ 0.27
HPS1-208ENST00000467246 EPRSP07814 1512 aaKnown RBP16.71■□□□□ 0.27
HPS1-208ENST00000467246 HECW1Q76N89 1606 aa16.71■□□□□ 0.27
HPS1-208ENST00000467246 SUPT6HQ7KZ85 1726 aaKnown RBP16.71■□□□□ 0.27
HPS1-208ENST00000467246 CHMP7Q8WUX9 453 aaPredicted RBP16.71■□□□□ 0.26
HPS1-208ENST00000467246 DISP1Q96F81 1524 aa16.7■□□□□ 0.26
HPS1-208ENST00000467246 PTPRKQ15262 1439 aa16.7■□□□□ 0.26
HPS1-208ENST00000467246 FBLN2P98095 1184 aa16.7■□□□□ 0.26
HPS1-208ENST00000467246 CDK13Q14004 1512 aaKnown RBP16.69■□□□□ 0.26
HPS1-208ENST00000467246 MAGI1Q96QZ7 1491 aaPredicted RBP16.69■□□□□ 0.26
HPS1-208ENST00000467246 ARHGEF11O15085 1522 aa16.67■□□□□ 0.26
HPS1-208ENST00000467246 KIAA0556O60303 1618 aa16.67■□□□□ 0.26
HPS1-208ENST00000467246 SYNJ2O15056 1496 aa16.66■□□□□ 0.26
HPS1-208ENST00000467246 SIN3AQ96ST3 1273 aa16.65■□□□□ 0.26
HPS1-208ENST00000467246 NEUROD1Q13562 356 aa16.65■□□□□ 0.26
HPS1-208ENST00000467246 CEP170Q5SW79 1584 aa16.64■□□□□ 0.25
HPS1-208ENST00000467246 MIER1Q8N108 512 aa16.63■□□□□ 0.25
HPS1-208ENST00000467246 PTPN23Q9H3S7 1636 aa16.63■□□□□ 0.25
HPS1-208ENST00000467246 HFM1A2PYH4 1435 aa16.61■□□□□ 0.25
HPS1-208ENST00000467246 NUP153P49790 1475 aaKnown RBP16.6■□□□□ 0.25
HPS1-208ENST00000467246 NAIPQ13075 1403 aa16.59■□□□□ 0.25
HPS1-208ENST00000467246 JPH4Q96JJ6 628 aa16.58■□□□□ 0.24
HPS1-208ENST00000467246 TCOF1Q13428 1488 aaKnown RBP16.57■□□□□ 0.24
HPS1-208ENST00000467246 CHIC2Q9UKJ5 165 aa16.57■□□□□ 0.24
HPS1-208ENST00000467246 NUP160Q12769 1436 aa16.57■□□□□ 0.24
HPS1-208ENST00000467246 RAPGEF6Q8TEU7 1601 aa16.56■□□□□ 0.24
HPS1-208ENST00000467246 RRP7BPQ9NSQ0 103 aa16.55■□□□□ 0.24
HPS1-208ENST00000467246 GTF3C3Q9Y5Q9 886 aa16.55■□□□□ 0.24
HPS1-208ENST00000467246 ACIN1Q9UKV3 1341 aaKnown RBP16.54■□□□□ 0.24
HPS1-208ENST00000467246 MIA2Q96PC5 1412 aa16.54■□□□□ 0.24
HPS1-208ENST00000467246 PLB1Q6P1J6 1458 aa16.54■□□□□ 0.24
HPS1-208ENST00000467246 UACAQ9BZF9 1416 aa16.53■□□□□ 0.24
HPS1-208ENST00000467246 CDK11AQ9UQ88 783 aaPredicted RBP16.52■□□□□ 0.23
HPS1-208ENST00000467246 CARMIL2Q6F5E8 1435 aa16.51■□□□□ 0.23
HPS1-208ENST00000467246 CENPBP07199 599 aaPredicted RBP16.49■□□□□ 0.23
HPS1-208ENST00000467246 YTHDC1Q96MU7 727 aaKnown RBP16.49■□□□□ 0.23
HPS1-208ENST00000467246 PRG4Q92954 1404 aaPredicted RBP16.49■□□□□ 0.23
HPS1-208ENST00000467246 TIMELESSQ9UNS1 1208 aa16.49■□□□□ 0.23
HPS1-208ENST00000467246 ZNF644Q9H582 1327 aaPredicted RBP16.49■□□□□ 0.23
HPS1-208ENST00000467246 PPP1R15AO75807 674 aaPredicted RBP16.46■□□□□ 0.23
HPS1-208ENST00000467246 TROQ12816 1431 aaPredicted RBP16.46■□□□□ 0.22
HPS1-208ENST00000467246 AKNAQ7Z591 1439 aa16.44■□□□□ 0.22
HPS1-208ENST00000467246 KDM6BO15054 1643 aa16.44■□□□□ 0.22
HPS1-208ENST00000467246 TRIM52Q96A61 297 aa16.43■□□□□ 0.22
HPS1-208ENST00000467246 DAPK1P53355 1430 aa16.43■□□□□ 0.22
HPS1-208ENST00000467246 GCC2Q8IWJ2 1684 aa16.42■□□□□ 0.22
HPS1-208ENST00000467246 ABCC5O15440 1437 aa16.42■□□□□ 0.22
HPS1-208ENST00000467246 TONSLQ96HA7 1378 aa16.42■□□□□ 0.22
HPS1-208ENST00000467246 CFDP1Q9UEE9 299 aaPredicted RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 137.3 ms