RNA–Protein interactions for RNA: ENST00000466963.1

CXXC4-202, Transcript of CXXC finger protein 4, humanhuman

TSL 1 (best)

Gene CXXC4, Length 3,130 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-202ENST00000466963 DIP2BQ9P265 1576 aa10.49□□□□□ -0.73
CXXC4-202ENST00000466963 ERCC6L2Q5T890 1561 aa10.48□□□□□ -0.73
CXXC4-202ENST00000466963 NPM1P06748 294 aaKnown RBP eCLIP10.48□□□□□ -0.73
CXXC4-202ENST00000466963 CUL7Q14999 1698 aa10.47□□□□□ -0.73
CXXC4-202ENST00000466963 KDM6BO15054 1643 aa10.46□□□□□ -0.73
CXXC4-202ENST00000466963 RUSC2Q8N2Y8 1516 aa10.46□□□□□ -0.74
CXXC4-202ENST00000466963 UHRF1BP1LA0JNW5 1464 aa10.45□□□□□ -0.74
CXXC4-202ENST00000466963 PLB1Q6P1J6 1458 aa10.44□□□□□ -0.74
CXXC4-202ENST00000466963 KIAA0586Q9BVV6 1533 aa10.43□□□□□ -0.74
CXXC4-202ENST00000466963 TEX14Q8IWB6 1497 aa10.42□□□□□ -0.74
CXXC4-202ENST00000466963 PRG4Q92954 1404 aaPredicted RBP10.42□□□□□ -0.74
CXXC4-202ENST00000466963 CARMIL2Q6F5E8 1435 aa10.37□□□□□ -0.75
CXXC4-202ENST00000466963 ADCY10Q96PN6 1610 aa10.37□□□□□ -0.75
CXXC4-202ENST00000466963 JPH4Q96JJ6 628 aa10.37□□□□□ -0.75
CXXC4-202ENST00000466963 PHLDB1Q86UU1 1377 aa10.35□□□□□ -0.75
CXXC4-202ENST00000466963 ABCC2Q92887 1545 aa10.35□□□□□ -0.75
CXXC4-202ENST00000466963 FAM69CQ0P6D2 419 aa10.31□□□□□ -0.76
CXXC4-202ENST00000466963 TNIKQ9UKE5 1360 aa10.31□□□□□ -0.76
CXXC4-202ENST00000466963 MAP3K4Q9Y6R4 1608 aa10.31□□□□□ -0.76
CXXC4-202ENST00000466963 KIF27Q86VH2 1401 aa10.29□□□□□ -0.76
CXXC4-202ENST00000466963 KDM5BQ9UGL1 1544 aa10.28□□□□□ -0.76
CXXC4-202ENST00000466963 CFAP43Q8NDM7 1665 aa10.27□□□□□ -0.76
CXXC4-202ENST00000466963 MAGI3Q5TCQ9 1506 aa10.27□□□□□ -0.77
CXXC4-202ENST00000466963 PTPRGP23470 1445 aa10.27□□□□□ -0.77
CXXC4-202ENST00000466963 PPRC1Q5VV67 1664 aaKnown RBP10.27□□□□□ -0.77
CXXC4-202ENST00000466963 UGGT2Q9NYU1 1516 aa10.25□□□□□ -0.77
CXXC4-202ENST00000466963 ADGRL1O94910 1474 aa10.25□□□□□ -0.77
CXXC4-202ENST00000466963 IQGAP2Q13576 1575 aa10.24□□□□□ -0.77
CXXC4-202ENST00000466963 KDM4FA0A1W2PPD8 638 aa10.24□□□□□ -0.77
CXXC4-202ENST00000466963 UACAQ9BZF9 1416 aa10.24□□□□□ -0.77
CXXC4-202ENST00000466963 GOLGA3Q08378 1498 aa10.22□□□□□ -0.77
CXXC4-202ENST00000466963 EPRSP07814 1512 aaKnown RBP10.22□□□□□ -0.77
CXXC4-202ENST00000466963 ASXL2Q76L83 1435 aa10.21□□□□□ -0.77
CXXC4-202ENST00000466963 FAM9AQ8IZU1 332 aaPredicted RBP10.21□□□□□ -0.78
CXXC4-202ENST00000466963 ARAP3Q8WWN8 1544 aa10.2□□□□□ -0.78
CXXC4-202ENST00000466963 HECW2Q9P2P5 1572 aa10.19□□□□□ -0.78
CXXC4-202ENST00000466963 IGF1RP08069 1367 aa10.19□□□□□ -0.78
CXXC4-202ENST00000466963 FBXO41Q8TF61 875 aa10.18□□□□□ -0.78
CXXC4-202ENST00000466963 WDR7Q9Y4E6 1490 aa10.17□□□□□ -0.78
CXXC4-202ENST00000466963 ILDR1Q86SU0 546 aaPredicted RBP10.17□□□□□ -0.78
CXXC4-202ENST00000466963 TSPOAP1O95153 1857 aa10.15□□□□□ -0.78
CXXC4-202ENST00000466963 ZCCHC11Q5TAX3 1644 aaKnown RBP10.15□□□□□ -0.78
CXXC4-202ENST00000466963 CARMIL1Q5VZK9 1371 aa10.14□□□□□ -0.79
CXXC4-202ENST00000466963 PHF23Q9BUL5 403 aaPredicted RBP10.14□□□□□ -0.79
CXXC4-202ENST00000466963 KIAA0556O60303 1618 aa10.14□□□□□ -0.79
CXXC4-202ENST00000466963 CFAP74Q9C0B2 1584 aa10.13□□□□□ -0.79
CXXC4-202ENST00000466963 NEO1Q92859 1461 aa10.13□□□□□ -0.79
CXXC4-202ENST00000466963 DISP1Q96F81 1524 aa10.11□□□□□ -0.79
CXXC4-202ENST00000466963 ADAMTSL3P82987 1691 aa10.11□□□□□ -0.79
CXXC4-202ENST00000466963 RAPGEF2Q9Y4G8 1499 aa10.1□□□□□ -0.79
CXXC4-202ENST00000466963 ABCA8O94911 1581 aa10.1□□□□□ -0.79
CXXC4-202ENST00000466963 CTTNBP2Q8WZ74 1663 aa10.09□□□□□ -0.79
CXXC4-202ENST00000466963 ABCA9Q8IUA7 1624 aa10.07□□□□□ -0.8
CXXC4-202ENST00000466963 IQSEC2Q5JU85 1478 aa10.07□□□□□ -0.8
CXXC4-202ENST00000466963 CD109Q6YHK3 1445 aa10.06□□□□□ -0.8
CXXC4-202ENST00000466963 MAGI2Q86UL8 1455 aa10.06□□□□□ -0.8
CXXC4-202ENST00000466963 POGZQ7Z3K3 1410 aa10.05□□□□□ -0.8
CXXC4-202ENST00000466963 BCORL1Q5H9F3 1711 aa10.03□□□□□ -0.8
CXXC4-202ENST00000466963 PCF11O94913 1555 aaKnown RBP10.03□□□□□ -0.8
CXXC4-202ENST00000466963 ZMYM4Q5VZL5 1548 aa10.02□□□□□ -0.81
CXXC4-202ENST00000466963 COL17A1Q9UMD9 1497 aaPredicted RBP10.01□□□□□ -0.81
CXXC4-202ENST00000466963 EFCAB5A4FU69 1503 aa10□□□□□ -0.81
CXXC4-202ENST00000466963 ARHGEF40Q8TER5 1519 aa10□□□□□ -0.81
CXXC4-202ENST00000466963 PTPRMP28827 1452 aa10□□□□□ -0.81
CXXC4-202ENST00000466963 FANCAO15360 1455 aa9.99□□□□□ -0.81
CXXC4-202ENST00000466963 FHOD3Q2V2M9 1422 aa9.98□□□□□ -0.81
CXXC4-202ENST00000466963 SENP3Q9H4L4 574 aaPredicted RBP9.98□□□□□ -0.81
CXXC4-202ENST00000466963 DMRT2Q9Y5R5 561 aa9.97□□□□□ -0.81
CXXC4-202ENST00000466963 KIF21BO75037 1637 aa9.97□□□□□ -0.81
CXXC4-202ENST00000466963 AKNAQ7Z591 1439 aa9.95□□□□□ -0.82
CXXC4-202ENST00000466963 REREQ9P2R6 1566 aa9.95□□□□□ -0.82
CXXC4-202ENST00000466963 TTC37Q6PGP7 1564 aa9.94□□□□□ -0.82
CXXC4-202ENST00000466963 SAMD9Q5K651 1589 aa9.93□□□□□ -0.82
CXXC4-202ENST00000466963 EEA1Q15075 1411 aa9.92□□□□□ -0.82
CXXC4-202ENST00000466963 LMTK3Q96Q04 1460 aa9.92□□□□□ -0.82
CXXC4-202ENST00000466963 PRXQ9BXM0 1461 aa9.92□□□□□ -0.82
CXXC4-202ENST00000466963 DENND4BO75064 1496 aaPredicted RBP9.91□□□□□ -0.82
CXXC4-202ENST00000466963 PREX1Q8TCU6 1659 aa9.91□□□□□ -0.82
CXXC4-202ENST00000466963 RAPGEF6Q8TEU7 1601 aa9.91□□□□□ -0.82
CXXC4-202ENST00000466963 PTPRTO14522 1441 aa9.91□□□□□ -0.82
CXXC4-202ENST00000466963 RICTORQ6R327 1708 aa9.9□□□□□ -0.82
CXXC4-202ENST00000466963 FRMPD1Q5SYB0 1578 aa9.89□□□□□ -0.83
CXXC4-202ENST00000466963 MADDQ8WXG6 1647 aa9.89□□□□□ -0.83
CXXC4-202ENST00000466963 ZFYVE16Q7Z3T8 1539 aa9.88□□□□□ -0.83
CXXC4-202ENST00000466963 ATP10BO94823 1461 aa9.88□□□□□ -0.83
CXXC4-202ENST00000466963 ARHGEF12Q9NZN5 1544 aa9.87□□□□□ -0.83
CXXC4-202ENST00000466963 AGLP35573 1532 aa9.85□□□□□ -0.83
CXXC4-202ENST00000466963 SETD1BQ9UPS6 1966 aaKnown RBP9.85□□□□□ -0.83
CXXC4-202ENST00000466963 CNTLNQ9NXG0 1405 aa9.85□□□□□ -0.83
CXXC4-202ENST00000466963 RIMS1Q86UR5 1692 aaKnown RBP9.84□□□□□ -0.83
CXXC4-202ENST00000466963 FER1L4A9Z1Z3 1794 aa9.84□□□□□ -0.83
CXXC4-202ENST00000466963 C9orf84Q5VXU9 1444 aa9.84□□□□□ -0.83
CXXC4-202ENST00000466963 YEATS2Q9ULM3 1422 aa9.84□□□□□ -0.83
CXXC4-202ENST00000466963 FAM135AQ9P2D6 1515 aa9.84□□□□□ -0.83
CXXC4-202ENST00000466963 CERKQ8TCT0 537 aa9.83□□□□□ -0.84
CXXC4-202ENST00000466963 SOCS7O14512 581 aa9.82□□□□□ -0.84
CXXC4-202ENST00000466963 ATP10AO60312 1499 aa9.82□□□□□ -0.84
CXXC4-202ENST00000466963 MROH2AA6NES4 1674 aa9.81□□□□□ -0.84
CXXC4-202ENST00000466963 NPATQ14207 1427 aa9.79□□□□□ -0.84
CXXC4-202ENST00000466963 SUPT5HO00267 1087 aaKnown RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms