RNA–Protein interactions for RNA: ENST00000466912.5

PTPN20-211, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 3

Gene PTPN20, Length 446 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-211ENST00000466912 PRXQ9BXM0 1461 aa16.77■□□□□ 0.28
PTPN20-211ENST00000466912 RAPGEF2Q9Y4G8 1499 aa16.76■□□□□ 0.27
PTPN20-211ENST00000466912 MSH5O43196 834 aa16.75■□□□□ 0.27
PTPN20-211ENST00000466912 FAM9AQ8IZU1 332 aaPredicted RBP16.74■□□□□ 0.27
PTPN20-211ENST00000466912 ARHGEF11O15085 1522 aa16.72■□□□□ 0.27
PTPN20-211ENST00000466912 KIAA0586Q9BVV6 1533 aa16.7■□□□□ 0.26
PTPN20-211ENST00000466912 JPH4Q96JJ6 628 aa16.7■□□□□ 0.26
PTPN20-211ENST00000466912 RIMBP3CA6NJZ7 1639 aa16.67■□□□□ 0.26
PTPN20-211ENST00000466912 RIMBP3BA6NNM3 1639 aa16.67■□□□□ 0.26
PTPN20-211ENST00000466912 RIMBP3Q9UFD9 1639 aa16.67■□□□□ 0.26
PTPN20-211ENST00000466912 SHROOM2Q13796 1616 aa16.63■□□□□ 0.25
PTPN20-211ENST00000466912 ARAP1Q96P48 1450 aa16.62■□□□□ 0.25
PTPN20-211ENST00000466912 PRG4Q92954 1404 aaPredicted RBP16.62■□□□□ 0.25
PTPN20-211ENST00000466912 ERCC6L2Q5T890 1561 aa16.61■□□□□ 0.25
PTPN20-211ENST00000466912 CYB5RLQ6IPT4 315 aa16.61■□□□□ 0.25
PTPN20-211ENST00000466912 IQGAP2Q13576 1575 aa16.56■□□□□ 0.24
PTPN20-211ENST00000466912 KIF21BO75037 1637 aa16.55■□□□□ 0.24
PTPN20-211ENST00000466912 UGGT2Q9NYU1 1516 aa16.53■□□□□ 0.24
PTPN20-211ENST00000466912 DISP1Q96F81 1524 aa16.51■□□□□ 0.23
PTPN20-211ENST00000466912 GOLGA3Q08378 1498 aa16.49■□□□□ 0.23
PTPN20-211ENST00000466912 CARMIL2Q6F5E8 1435 aa16.49■□□□□ 0.23
PTPN20-211ENST00000466912 EHMT2Q96KQ7 1210 aa16.49■□□□□ 0.23
PTPN20-211ENST00000466912 UBTFP17480 764 aaKnown RBP16.47■□□□□ 0.23
PTPN20-211ENST00000466912 TNIKQ9UKE5 1360 aa16.47■□□□□ 0.23
PTPN20-211ENST00000466912 CTTNBP2Q8WZ74 1663 aa16.45■□□□□ 0.22
PTPN20-211ENST00000466912 PTPRGP23470 1445 aa16.45■□□□□ 0.22
PTPN20-211ENST00000466912 KIAA0556O60303 1618 aa16.41■□□□□ 0.22
PTPN20-211ENST00000466912 TTBK1Q5TCY1 1321 aaPredicted RBP16.39■□□□□ 0.21
PTPN20-211ENST00000466912 RANGAP1P46060 587 aaPredicted RBP16.38■□□□□ 0.21
PTPN20-211ENST00000466912 P3H3Q8IVL6 736 aa16.38■□□□□ 0.21
PTPN20-211ENST00000466912 SAMD9Q5K651 1589 aa16.35■□□□□ 0.21
PTPN20-211ENST00000466912 UACAQ9BZF9 1416 aa16.34■□□□□ 0.21
PTPN20-211ENST00000466912 LOC105371045A0A1W2PR82 267 aa16.32■□□□□ 0.2
PTPN20-211ENST00000466912 UHRF1BP1LA0JNW5 1464 aa16.31■□□□□ 0.2
PTPN20-211ENST00000466912 FHOD3Q2V2M9 1422 aa16.31■□□□□ 0.2
PTPN20-211ENST00000466912 ADCY10Q96PN6 1610 aa16.3■□□□□ 0.2
PTPN20-211ENST00000466912 EFCAB5A4FU69 1503 aa16.29■□□□□ 0.2
PTPN20-211ENST00000466912 PLB1Q6P1J6 1458 aa16.29■□□□□ 0.2
PTPN20-211ENST00000466912 ARHGAP35Q9NRY4 1499 aa16.29■□□□□ 0.2
PTPN20-211ENST00000466912 NPM1P06748 294 aaKnown RBP eCLIP16.27■□□□□ 0.2
PTPN20-211ENST00000466912 ABCC2Q92887 1545 aa16.27■□□□□ 0.2
PTPN20-211ENST00000466912 ABCA8O94911 1581 aa16.26■□□□□ 0.19
PTPN20-211ENST00000466912 KDM5BQ9UGL1 1544 aa16.23■□□□□ 0.19
PTPN20-211ENST00000466912 CLIP1P30622 1438 aa16.22■□□□□ 0.19
PTPN20-211ENST00000466912 MAPKBP1O60336 1514 aa16.19■□□□□ 0.18
PTPN20-211ENST00000466912 TRHP20396 242 aaPredicted RBP16.18■□□□□ 0.18
PTPN20-211ENST00000466912 CEP162Q5TB80 1403 aa16.18■□□□□ 0.18
PTPN20-211ENST00000466912 FMN1Q68DA7 1419 aa16.18■□□□□ 0.18
PTPN20-211ENST00000466912 ATP10BO94823 1461 aa16.16■□□□□ 0.18
PTPN20-211ENST00000466912 NUP153P49790 1475 aaKnown RBP16.16■□□□□ 0.18
PTPN20-211ENST00000466912 ARID3CA6NKF2 412 aa16.16■□□□□ 0.18
PTPN20-211ENST00000466912 ASXL2Q76L83 1435 aa16.16■□□□□ 0.18
PTPN20-211ENST00000466912 RAPGEF6Q8TEU7 1601 aa16.14■□□□□ 0.17
PTPN20-211ENST00000466912 ABCC10Q5T3U5 1492 aa16.14■□□□□ 0.17
PTPN20-211ENST00000466912 ZCCHC11Q5TAX3 1644 aaKnown RBP16.12■□□□□ 0.17
PTPN20-211ENST00000466912 FAM69CQ0P6D2 419 aa16.11■□□□□ 0.17
PTPN20-211ENST00000466912 CASKIN1Q8WXD9 1431 aa16.09■□□□□ 0.17
PTPN20-211ENST00000466912 WDR7Q9Y4E6 1490 aa16.08■□□□□ 0.16
PTPN20-211ENST00000466912 DIP2BQ9P265 1576 aa16.06■□□□□ 0.16
PTPN20-211ENST00000466912 EPRSP07814 1512 aaKnown RBP16.06■□□□□ 0.16
PTPN20-211ENST00000466912 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.06■□□□□ 0.16
PTPN20-211ENST00000466912 HNRNPUL2Q1KMD3 747 aaKnown RBP16.06■□□□□ 0.16
PTPN20-211ENST00000466912 ATP1B4Q9UN42 357 aaPredicted RBP16.06■□□□□ 0.16
PTPN20-211ENST00000466912 PLEKHD1A6NEE1 506 aa16.03■□□□□ 0.16
PTPN20-211ENST00000466912 KCNH8Q96L42 1107 aa16.03■□□□□ 0.16
PTPN20-211ENST00000466912 CDK13Q14004 1512 aaKnown RBP16.03■□□□□ 0.16
PTPN20-211ENST00000466912 HECW1Q76N89 1606 aa16.02■□□□□ 0.16
PTPN20-211ENST00000466912 GLI2P10070 1586 aa16.02■□□□□ 0.16
PTPN20-211ENST00000466912 PCF11O94913 1555 aaKnown RBP16.01■□□□□ 0.15
PTPN20-211ENST00000466912 FYCO1Q9BQS8 1478 aa16.01■□□□□ 0.15
PTPN20-211ENST00000466912 KIF13AQ9H1H9 1805 aa15.99■□□□□ 0.15
PTPN20-211ENST00000466912 VPS8Q8N3P4 1428 aa15.98■□□□□ 0.15
PTPN20-211ENST00000466912 CDK11AQ9UQ88 783 aaPredicted RBP15.97■□□□□ 0.15
PTPN20-211ENST00000466912 CCDC18Q5T9S5 1454 aa15.97■□□□□ 0.15
PTPN20-211ENST00000466912 TROQ12816 1431 aaPredicted RBP15.94■□□□□ 0.14
PTPN20-211ENST00000466912 CD109Q6YHK3 1445 aa15.94■□□□□ 0.14
PTPN20-211ENST00000466912 LRRIQ1Q96JM4 1722 aa15.92■□□□□ 0.14
PTPN20-211ENST00000466912 MAP3K4Q9Y6R4 1608 aa15.91■□□□□ 0.14
PTPN20-211ENST00000466912 MAGI3Q5TCQ9 1506 aa15.9■□□□□ 0.14
PTPN20-211ENST00000466912 ABCA9Q8IUA7 1624 aa15.88■□□□□ 0.13
PTPN20-211ENST00000466912 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.88■□□□□ 0.13
PTPN20-211ENST00000466912 PPRC1Q5VV67 1664 aaKnown RBP15.87■□□□□ 0.13
PTPN20-211ENST00000466912 CFAP43Q8NDM7 1665 aa15.86■□□□□ 0.13
PTPN20-211ENST00000466912 TEX14Q8IWB6 1497 aa15.85■□□□□ 0.13
PTPN20-211ENST00000466912 MTUS2Q5JR59 1369 aa15.83■□□□□ 0.12
PTPN20-211ENST00000466912 PLCH2O75038 1416 aa15.83■□□□□ 0.12
PTPN20-211ENST00000466912 COL17A1Q9UMD9 1497 aaPredicted RBP15.83■□□□□ 0.12
PTPN20-211ENST00000466912 TTC37Q6PGP7 1564 aa15.83■□□□□ 0.12
PTPN20-211ENST00000466912 KIF14Q15058 1648 aa15.83■□□□□ 0.12
PTPN20-211ENST00000466912 TSPOAP1O95153 1857 aa15.82■□□□□ 0.12
PTPN20-211ENST00000466912 MAP3K1Q13233 1512 aa15.82■□□□□ 0.12
PTPN20-211ENST00000466912 KANK4Q5T7N3 995 aaPredicted RBP15.81■□□□□ 0.12
PTPN20-211ENST00000466912 TIAM1Q13009 1591 aa15.8■□□□□ 0.12
PTPN20-211ENST00000466912 PHLDB1Q86UU1 1377 aa15.79■□□□□ 0.12
PTPN20-211ENST00000466912 LRRC9Q6ZRR7 1453 aa15.78■□□□□ 0.12
PTPN20-211ENST00000466912 NEO1Q92859 1461 aa15.78■□□□□ 0.12
PTPN20-211ENST00000466912 EHBP1L1Q8N3D4 1523 aa15.78■□□□□ 0.12
PTPN20-211ENST00000466912 FANCAO15360 1455 aa15.77■□□□□ 0.11
PTPN20-211ENST00000466912 EFCAB2Q5VUJ9 269 aa15.76■□□□□ 0.11
PTPN20-211ENST00000466912 ARAP3Q8WWN8 1544 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms