RNA–Protein interactions for RNA: ENST00000466861.1

SUMO3-205, Transcript of small ubiquitin-like modifier 3, humanhuman

TSL 2

Gene SUMO3, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-205ENST00000466861 KIAA0586Q9BVV6 1533 aa39.04■■■■□ 3.84
SUMO3-205ENST00000466861 PRXQ9BXM0 1461 aa38.99■■■■□ 3.83
SUMO3-205ENST00000466861 CSRNP3Q8WYN3 585 aa38.96■■■■□ 3.83
SUMO3-205ENST00000466861 JPH4Q96JJ6 628 aa38.94■■■■□ 3.82
SUMO3-205ENST00000466861 ARAP1Q96P48 1450 aa38.92■■■■□ 3.82
SUMO3-205ENST00000466861 PRG4Q92954 1404 aaPredicted RBP38.81■■■■□ 3.8
SUMO3-205ENST00000466861 CYB5RLQ6IPT4 315 aa38.81■■■■□ 3.8
SUMO3-205ENST00000466861 IQGAP2Q13576 1575 aa38.8■■■■□ 3.8
SUMO3-205ENST00000466861 ERCC6L2Q5T890 1561 aa38.78■■■■□ 3.8
SUMO3-205ENST00000466861 CTTNBP2Q8WZ74 1663 aa38.71■■■■□ 3.79
SUMO3-205ENST00000466861 FAM9AQ8IZU1 332 aaPredicted RBP38.66■■■■□ 3.78
SUMO3-205ENST00000466861 KIF21BO75037 1637 aa38.65■■■■□ 3.78
SUMO3-205ENST00000466861 UGGT2Q9NYU1 1516 aa38.63■■■■□ 3.78
SUMO3-205ENST00000466861 CARMIL2Q6F5E8 1435 aa38.62■■■■□ 3.77
SUMO3-205ENST00000466861 DISP1Q96F81 1524 aa38.49■■■■□ 3.75
SUMO3-205ENST00000466861 TNIKQ9UKE5 1360 aa38.46■■■■□ 3.75
SUMO3-205ENST00000466861 GOLGA3Q08378 1498 aa38.46■■■■□ 3.75
SUMO3-205ENST00000466861 KIAA0556O60303 1618 aa38.41■■■■□ 3.74
SUMO3-205ENST00000466861 PTPRGP23470 1445 aa38.4■■■■□ 3.74
SUMO3-205ENST00000466861 SAMD9Q5K651 1589 aa38.23■■■■□ 3.71
SUMO3-205ENST00000466861 UBTFP17480 764 aaKnown RBP38.22■■■■□ 3.71
SUMO3-205ENST00000466861 ADCY10Q96PN6 1610 aa38.22■■■■□ 3.71
SUMO3-205ENST00000466861 UHRF1BP1LA0JNW5 1464 aa38.19■■■■□ 3.7
SUMO3-205ENST00000466861 UACAQ9BZF9 1416 aa38.17■■■■□ 3.7
SUMO3-205ENST00000466861 NPM1P06748 294 aaKnown RBP eCLIP38.13■■■■□ 3.69
SUMO3-205ENST00000466861 EFCAB5A4FU69 1503 aa38.12■■■■□ 3.69
SUMO3-205ENST00000466861 TTBK1Q5TCY1 1321 aaPredicted RBP38.1■■■■□ 3.69
SUMO3-205ENST00000466861 ABCC2Q92887 1545 aa38.09■■■■□ 3.69
SUMO3-205ENST00000466861 MAPKBP1O60336 1514 aa38.04■■■■□ 3.68
SUMO3-205ENST00000466861 EHMT2Q96KQ7 1210 aa38.02■■■■□ 3.68
SUMO3-205ENST00000466861 ABCA8O94911 1581 aa38.02■■■■□ 3.68
SUMO3-205ENST00000466861 P3H3Q8IVL6 736 aa37.98■■■■□ 3.67
SUMO3-205ENST00000466861 KDM5BQ9UGL1 1544 aa37.97■■■■□ 3.67
SUMO3-205ENST00000466861 PLB1Q6P1J6 1458 aa37.96■■■■□ 3.67
SUMO3-205ENST00000466861 TRHP20396 242 aaPredicted RBP37.95■■■■□ 3.67
SUMO3-205ENST00000466861 RANGAP1P46060 587 aaPredicted RBP37.93■■■■□ 3.66
SUMO3-205ENST00000466861 FHOD3Q2V2M9 1422 aa37.9■■■■□ 3.66
SUMO3-205ENST00000466861 ARHGAP35Q9NRY4 1499 aa37.86■■■■□ 3.65
SUMO3-205ENST00000466861 ZCCHC11Q5TAX3 1644 aaKnown RBP37.83■■■■□ 3.65
SUMO3-205ENST00000466861 RAPGEF6Q8TEU7 1601 aa37.82■■■■□ 3.64
SUMO3-205ENST00000466861 ABCC10Q5T3U5 1492 aa37.81■■■■□ 3.64
SUMO3-205ENST00000466861 FMN1Q68DA7 1419 aa37.77■■■■□ 3.64
SUMO3-205ENST00000466861 ASXL2Q76L83 1435 aa37.77■■■■□ 3.64
SUMO3-205ENST00000466861 KIF13AQ9H1H9 1805 aa37.75■■■■□ 3.63
SUMO3-205ENST00000466861 DIP2BQ9P265 1576 aa37.72■■■■□ 3.63
SUMO3-205ENST00000466861 CLIP1P30622 1438 aa37.68■■■■□ 3.62
SUMO3-205ENST00000466861 ATP10BO94823 1461 aa37.67■■■■□ 3.62
SUMO3-205ENST00000466861 NUP153P49790 1475 aaKnown RBP37.65■■■■□ 3.62
SUMO3-205ENST00000466861 FAM69CQ0P6D2 419 aa37.65■■■■□ 3.62
SUMO3-205ENST00000466861 WDR7Q9Y4E6 1490 aa37.63■■■■□ 3.61
SUMO3-205ENST00000466861 GLI2P10070 1586 aa37.63■■■■□ 3.61
SUMO3-205ENST00000466861 EPRSP07814 1512 aaKnown RBP37.56■■■■□ 3.6
SUMO3-205ENST00000466861 HECW1Q76N89 1606 aa37.54■■■■□ 3.6
SUMO3-205ENST00000466861 LOC105371045A0A1W2PR82 267 aa37.53■■■■□ 3.6
SUMO3-205ENST00000466861 CEP162Q5TB80 1403 aa37.53■■■■□ 3.6
SUMO3-205ENST00000466861 ARID3CA6NKF2 412 aa37.46■■■■□ 3.59
SUMO3-205ENST00000466861 CASKIN1Q8WXD9 1431 aa37.45■■■■□ 3.59
SUMO3-205ENST00000466861 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.43■■■■□ 3.58
SUMO3-205ENST00000466861 HNRNPUL2Q1KMD3 747 aaKnown RBP37.43■■■■□ 3.58
SUMO3-205ENST00000466861 MAP3K4Q9Y6R4 1608 aa37.41■■■■□ 3.58
SUMO3-205ENST00000466861 PLEKHD1A6NEE1 506 aa37.39■■■■□ 3.58
SUMO3-205ENST00000466861 FYCO1Q9BQS8 1478 aa37.39■■■■□ 3.58
SUMO3-205ENST00000466861 PCF11O94913 1555 aaKnown RBP37.37■■■■□ 3.57
SUMO3-205ENST00000466861 CFAP43Q8NDM7 1665 aa37.36■■■■□ 3.57
SUMO3-205ENST00000466861 KCNH8Q96L42 1107 aa37.35■■■■□ 3.57
SUMO3-205ENST00000466861 CDK13Q14004 1512 aaKnown RBP37.35■■■■□ 3.57
SUMO3-205ENST00000466861 TSPOAP1O95153 1857 aa37.34■■■■□ 3.57
SUMO3-205ENST00000466861 ATP1B4Q9UN42 357 aaPredicted RBP37.33■■■■□ 3.57
SUMO3-205ENST00000466861 CCDC18Q5T9S5 1454 aa37.33■■■■□ 3.57
SUMO3-205ENST00000466861 CDK11AQ9UQ88 783 aaPredicted RBP37.32■■■■□ 3.56
SUMO3-205ENST00000466861 PPRC1Q5VV67 1664 aaKnown RBP37.28■■■■□ 3.56
SUMO3-205ENST00000466861 ABCA9Q8IUA7 1624 aa37.28■■■■□ 3.56
SUMO3-205ENST00000466861 LRRIQ1Q96JM4 1722 aa37.27■■■■□ 3.56
SUMO3-205ENST00000466861 TEX14Q8IWB6 1497 aa37.26■■■■□ 3.56
SUMO3-205ENST00000466861 CD109Q6YHK3 1445 aa37.26■■■■□ 3.55
SUMO3-205ENST00000466861 MAGI3Q5TCQ9 1506 aa37.25■■■■□ 3.55
SUMO3-205ENST00000466861 TROQ12816 1431 aaPredicted RBP37.16■■■■□ 3.54
SUMO3-205ENST00000466861 VPS8Q8N3P4 1428 aa37.12■■■■□ 3.53
SUMO3-205ENST00000466861 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.1■■■■□ 3.532e-6■■■□□ 14.8
SUMO3-205ENST00000466861 KDM6BO15054 1643 aa37.08■■■■□ 3.53
SUMO3-205ENST00000466861 PHLDB1Q86UU1 1377 aa37.06■■■■□ 3.52
SUMO3-205ENST00000466861 KIF14Q15058 1648 aa37.05■■■■□ 3.52
SUMO3-205ENST00000466861 TTC37Q6PGP7 1564 aa37■■■■□ 3.51
SUMO3-205ENST00000466861 NEO1Q92859 1461 aa36.99■■■■□ 3.51
SUMO3-205ENST00000466861 ARAP3Q8WWN8 1544 aa36.95■■■■□ 3.5
SUMO3-205ENST00000466861 CFAP74Q9C0B2 1584 aa36.93■■■■□ 3.5
SUMO3-205ENST00000466861 PLCH2O75038 1416 aa36.93■■■■□ 3.5
SUMO3-205ENST00000466861 MYO5CQ9NQX4 1742 aa36.91■■■■□ 3.5
SUMO3-205ENST00000466861 MAP3K1Q13233 1512 aa36.89■■■■□ 3.5
SUMO3-205ENST00000466861 MTUS2Q5JR59 1369 aa36.89■■■■□ 3.5
SUMO3-205ENST00000466861 COL17A1Q9UMD9 1497 aaPredicted RBP36.88■■■■□ 3.5
SUMO3-205ENST00000466861 FANCAO15360 1455 aa36.86■■■■□ 3.49
SUMO3-205ENST00000466861 EHBP1L1Q8N3D4 1523 aa36.85■■■■□ 3.49
SUMO3-205ENST00000466861 TIAM1Q13009 1591 aa36.85■■■■□ 3.49
SUMO3-205ENST00000466861 AKNAQ7Z591 1439 aa36.79■■■■□ 3.48
SUMO3-205ENST00000466861 EFCAB2Q5VUJ9 269 aa36.79■■■■□ 3.48
SUMO3-205ENST00000466861 PREX2Q70Z35 1606 aa36.76■■■■□ 3.48
SUMO3-205ENST00000466861 CDC42BPBQ9Y5S2 1711 aa36.73■■■■□ 3.47
SUMO3-205ENST00000466861 CDC42BPAQ5VT25 1732 aa36.71■■■■□ 3.47
SUMO3-205ENST00000466861 ARHGAP5Q13017 1502 aa36.71■■■■□ 3.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms