RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 RUSC2Q8N2Y8 1516 aa16.55■□□□□ 0.24
RTFDC1-205ENST00000466260 ARAP1Q96P48 1450 aa16.55■□□□□ 0.24
RTFDC1-205ENST00000466260 NUP160Q12769 1436 aa16.55■□□□□ 0.24
RTFDC1-205ENST00000466260 IGF1RP08069 1367 aa16.54■□□□□ 0.24
RTFDC1-205ENST00000466260 CYB5RLQ6IPT4 315 aa16.52■□□□□ 0.24
RTFDC1-205ENST00000466260 ERCC6L2Q5T890 1561 aa16.51■□□□□ 0.23
RTFDC1-205ENST00000466260 SHROOM2Q13796 1616 aa16.49■□□□□ 0.23
RTFDC1-205ENST00000466260 CARMIL1Q5VZK9 1371 aa16.49■□□□□ 0.23
RTFDC1-205ENST00000466260 PIAS4Q8N2W9 510 aaPredicted RBP16.48■□□□□ 0.23
RTFDC1-205ENST00000466260 PRG4Q92954 1404 aaPredicted RBP16.4■□□□□ 0.22
RTFDC1-205ENST00000466260 RAPGEF2Q9Y4G8 1499 aa16.4■□□□□ 0.22
RTFDC1-205ENST00000466260 CTTNBP2Q8WZ74 1663 aa16.4■□□□□ 0.22
RTFDC1-205ENST00000466260 KIAA0586Q9BVV6 1533 aa16.39■□□□□ 0.21
RTFDC1-205ENST00000466260 JPH4Q96JJ6 628 aa16.38■□□□□ 0.21
RTFDC1-205ENST00000466260 IQGAP2Q13576 1575 aa16.37■□□□□ 0.21
RTFDC1-205ENST00000466260 FAM9AQ8IZU1 332 aaPredicted RBP16.35■□□□□ 0.21
RTFDC1-205ENST00000466260 TTBK1Q5TCY1 1321 aaPredicted RBP16.32■□□□□ 0.2
RTFDC1-205ENST00000466260 PRXQ9BXM0 1461 aa16.29■□□□□ 0.2
RTFDC1-205ENST00000466260 TRHP20396 242 aaPredicted RBP16.26■□□□□ 0.19
RTFDC1-205ENST00000466260 CSRNP3Q8WYN3 585 aa16.26■□□□□ 0.19
RTFDC1-205ENST00000466260 EEA1Q15075 1411 aa16.26■□□□□ 0.19
RTFDC1-205ENST00000466260 KIAA0556O60303 1618 aa16.23■□□□□ 0.19
RTFDC1-205ENST00000466260 CARMIL2Q6F5E8 1435 aa16.23■□□□□ 0.19
RTFDC1-205ENST00000466260 EHMT2Q96KQ7 1210 aa16.22■□□□□ 0.19
RTFDC1-205ENST00000466260 UGGT2Q9NYU1 1516 aa16.22■□□□□ 0.19
RTFDC1-205ENST00000466260 ADCY10Q96PN6 1610 aa16.22■□□□□ 0.19
RTFDC1-205ENST00000466260 DISP1Q96F81 1524 aa16.2■□□□□ 0.18
RTFDC1-205ENST00000466260 KIF21BO75037 1637 aa16.19■□□□□ 0.18
RTFDC1-205ENST00000466260 TNIKQ9UKE5 1360 aa16.18■□□□□ 0.18
RTFDC1-205ENST00000466260 PTPRGP23470 1445 aa16.17■□□□□ 0.18
RTFDC1-205ENST00000466260 RANGAP1P46060 587 aaPredicted RBP16.15■□□□□ 0.18
RTFDC1-205ENST00000466260 KIF13AQ9H1H9 1805 aa16.12■□□□□ 0.17
RTFDC1-205ENST00000466260 GOLGA3Q08378 1498 aa16.12■□□□□ 0.17
RTFDC1-205ENST00000466260 NPM1P06748 294 aaKnown RBP eCLIP16.11■□□□□ 0.17
RTFDC1-205ENST00000466260 P3H3Q8IVL6 736 aa16.1■□□□□ 0.17
RTFDC1-205ENST00000466260 ABCC2Q92887 1545 aa16.08■□□□□ 0.16
RTFDC1-205ENST00000466260 SAMD9Q5K651 1589 aa16.08■□□□□ 0.16
RTFDC1-205ENST00000466260 UACAQ9BZF9 1416 aa16.07■□□□□ 0.16
RTFDC1-205ENST00000466260 ZCCHC11Q5TAX3 1644 aaKnown RBP16.06■□□□□ 0.16
RTFDC1-205ENST00000466260 MAPKBP1O60336 1514 aa16.05■□□□□ 0.16
RTFDC1-205ENST00000466260 UBTFP17480 764 aaKnown RBP16.05■□□□□ 0.16
RTFDC1-205ENST00000466260 PLB1Q6P1J6 1458 aa16.04■□□□□ 0.16
RTFDC1-205ENST00000466260 TSPOAP1O95153 1857 aa16.04■□□□□ 0.16
RTFDC1-205ENST00000466260 DIP2BQ9P265 1576 aa16.03■□□□□ 0.16
RTFDC1-205ENST00000466260 UHRF1BP1LA0JNW5 1464 aa16.02■□□□□ 0.15
RTFDC1-205ENST00000466260 ABCA8O94911 1581 aa16.01■□□□□ 0.15
RTFDC1-205ENST00000466260 FHOD3Q2V2M9 1422 aa16■□□□□ 0.15
RTFDC1-205ENST00000466260 ABCC10Q5T3U5 1492 aa15.98■□□□□ 0.15
RTFDC1-205ENST00000466260 ARID3CA6NKF2 412 aa15.98■□□□□ 0.15
RTFDC1-205ENST00000466260 FAM69CQ0P6D2 419 aa15.98■□□□□ 0.15
RTFDC1-205ENST00000466260 RAPGEF6Q8TEU7 1601 aa15.97■□□□□ 0.15
RTFDC1-205ENST00000466260 MSH5O43196 834 aa15.97■□□□□ 0.15
RTFDC1-205ENST00000466260 EFCAB5A4FU69 1503 aa15.97■□□□□ 0.15
RTFDC1-205ENST00000466260 KDM5BQ9UGL1 1544 aa15.97■□□□□ 0.15
RTFDC1-205ENST00000466260 ASXL2Q76L83 1435 aa15.96■□□□□ 0.15
RTFDC1-205ENST00000466260 ARHGAP35Q9NRY4 1499 aa15.89■□□□□ 0.13
RTFDC1-205ENST00000466260 WDR7Q9Y4E6 1490 aa15.88■□□□□ 0.13
RTFDC1-205ENST00000466260 PPRC1Q5VV67 1664 aaKnown RBP15.87■□□□□ 0.13
RTFDC1-205ENST00000466260 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.87■□□□□ 0.13
RTFDC1-205ENST00000466260 HNRNPUL2Q1KMD3 747 aaKnown RBP15.87■□□□□ 0.13
RTFDC1-205ENST00000466260 EPRSP07814 1512 aaKnown RBP15.87■□□□□ 0.13
RTFDC1-205ENST00000466260 GLI2P10070 1586 aa15.86■□□□□ 0.13
RTFDC1-205ENST00000466260 MAP3K4Q9Y6R4 1608 aa15.85■□□□□ 0.13
RTFDC1-205ENST00000466260 ATP10BO94823 1461 aa15.84■□□□□ 0.13
RTFDC1-205ENST00000466260 NUP153P49790 1475 aaKnown RBP15.84■□□□□ 0.13
RTFDC1-205ENST00000466260 ATP1B4Q9UN42 357 aaPredicted RBP15.84■□□□□ 0.13
RTFDC1-205ENST00000466260 KCNH8Q96L42 1107 aa15.83■□□□□ 0.12
RTFDC1-205ENST00000466260 KDM6BO15054 1643 aa15.83■□□□□ 0.12
RTFDC1-205ENST00000466260 HECW1Q76N89 1606 aa15.82■□□□□ 0.12
RTFDC1-205ENST00000466260 CFAP43Q8NDM7 1665 aa15.82■□□□□ 0.12
RTFDC1-205ENST00000466260 CDK13Q14004 1512 aaKnown RBP15.81■□□□□ 0.12
RTFDC1-205ENST00000466260 LRRIQ1Q96JM4 1722 aa15.81■□□□□ 0.12
RTFDC1-205ENST00000466260 FMN1Q68DA7 1419 aa15.79■□□□□ 0.12
RTFDC1-205ENST00000466260 PCF11O94913 1555 aaKnown RBP15.79■□□□□ 0.12
RTFDC1-205ENST00000466260 CLIP1P30622 1438 aa15.77■□□□□ 0.12
RTFDC1-205ENST00000466260 ABCA9Q8IUA7 1624 aa15.73■□□□□ 0.11
RTFDC1-205ENST00000466260 CD109Q6YHK3 1445 aa15.73■□□□□ 0.11
RTFDC1-205ENST00000466260 TEX14Q8IWB6 1497 aa15.72■□□□□ 0.11
RTFDC1-205ENST00000466260 LOC105371045A0A1W2PR82 267 aa15.72■□□□□ 0.11
RTFDC1-205ENST00000466260 CEP162Q5TB80 1403 aa15.7■□□□□ 0.1
RTFDC1-205ENST00000466260 PPP4R3CPQ6ZMV5 832 aa15.7■□□□□ 0.1
RTFDC1-205ENST00000466260 PLEKHD1A6NEE1 506 aa15.69■□□□□ 0.1
RTFDC1-205ENST00000466260 TTC37Q6PGP7 1564 aa15.69■□□□□ 0.1
RTFDC1-205ENST00000466260 MAGI3Q5TCQ9 1506 aa15.67■□□□□ 0.1
RTFDC1-205ENST00000466260 KIF14Q15058 1648 aa15.66■□□□□ 0.1
RTFDC1-205ENST00000466260 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.66■□□□□ 0.1
RTFDC1-205ENST00000466260 CASKIN1Q8WXD9 1431 aa15.66■□□□□ 0.1
RTFDC1-205ENST00000466260 FYCO1Q9BQS8 1478 aa15.65■□□□□ 0.1
RTFDC1-205ENST00000466260 MYO5CQ9NQX4 1742 aa15.64■□□□□ 0.09
RTFDC1-205ENST00000466260 CCDC18Q5T9S5 1454 aa15.64■□□□□ 0.09
RTFDC1-205ENST00000466260 COL17A1Q9UMD9 1497 aaPredicted RBP15.64■□□□□ 0.09
RTFDC1-205ENST00000466260 CFAP74Q9C0B2 1584 aa15.6■□□□□ 0.09
RTFDC1-205ENST00000466260 CDK11AQ9UQ88 783 aaPredicted RBP15.59■□□□□ 0.09
RTFDC1-205ENST00000466260 TROQ12816 1431 aaPredicted RBP15.59■□□□□ 0.09
RTFDC1-205ENST00000466260 FANCAO15360 1455 aa15.56■□□□□ 0.08
RTFDC1-205ENST00000466260 NEO1Q92859 1461 aa15.55■□□□□ 0.08
RTFDC1-205ENST00000466260 KCNA4P22459 653 aa15.55■□□□□ 0.08
RTFDC1-205ENST00000466260 CDC42BPBQ9Y5S2 1711 aa15.54■□□□□ 0.08
RTFDC1-205ENST00000466260 CDC42BPAQ5VT25 1732 aa15.54■□□□□ 0.08
RTFDC1-205ENST00000466260 RICTORQ6R327 1708 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 208.1 ms