RNA–Protein interactions for RNA: ENST00000466072.5

PCCB-207, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene PCCB, Length 1,844 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-207ENST00000466072 JPH4Q96JJ6 628 aa29.55■■■□□ 2.32
PCCB-207ENST00000466072 RAPGEF2Q9Y4G8 1499 aa29.53■■■□□ 2.32
PCCB-207ENST00000466072 SHROOM2Q13796 1616 aa29.53■■■□□ 2.32
PCCB-207ENST00000466072 FAM9AQ8IZU1 332 aaPredicted RBP29.51■■■□□ 2.31
PCCB-207ENST00000466072 KIAA0586Q9BVV6 1533 aa29.5■■■□□ 2.31
PCCB-207ENST00000466072 PRG4Q92954 1404 aaPredicted RBP29.47■■■□□ 2.31
PCCB-207ENST00000466072 CSRNP3Q8WYN3 585 aa29.47■■■□□ 2.31
PCCB-207ENST00000466072 PRXQ9BXM0 1461 aa29.46■■■□□ 2.31
PCCB-207ENST00000466072 EEA1Q15075 1411 aa29.35■■■□□ 2.29
PCCB-207ENST00000466072 IQGAP2Q13576 1575 aa29.32■■■□□ 2.28
PCCB-207ENST00000466072 TTBK1Q5TCY1 1321 aaPredicted RBP29.22■■■□□ 2.27
PCCB-207ENST00000466072 EHMT2Q96KQ7 1210 aa29.21■■■□□ 2.27
PCCB-207ENST00000466072 DISP1Q96F81 1524 aa29.19■■■□□ 2.26
PCCB-207ENST00000466072 CTTNBP2Q8WZ74 1663 aa29.18■■■□□ 2.26
PCCB-207ENST00000466072 UGGT2Q9NYU1 1516 aa29.16■■■□□ 2.26
PCCB-207ENST00000466072 CARMIL2Q6F5E8 1435 aa29.14■■■□□ 2.26
PCCB-207ENST00000466072 PTPRGP23470 1445 aa29.1■■■□□ 2.25
PCCB-207ENST00000466072 TNIKQ9UKE5 1360 aa29.1■■■□□ 2.25
PCCB-207ENST00000466072 KIF21BO75037 1637 aa29.09■■■□□ 2.25
PCCB-207ENST00000466072 KIAA0556O60303 1618 aa29.06■■■□□ 2.24
PCCB-207ENST00000466072 RANGAP1P46060 587 aaPredicted RBP29.05■■■□□ 2.24
PCCB-207ENST00000466072 TRHP20396 242 aaPredicted RBP29.01■■■□□ 2.24
PCCB-207ENST00000466072 P3H3Q8IVL6 736 aa29.01■■■□□ 2.24
PCCB-207ENST00000466072 ADCY10Q96PN6 1610 aa29.01■■■□□ 2.23
PCCB-207ENST00000466072 UBTFP17480 764 aaKnown RBP28.97■■■□□ 2.23
PCCB-207ENST00000466072 GOLGA3Q08378 1498 aa28.95■■■□□ 2.23
PCCB-207ENST00000466072 UACAQ9BZF9 1416 aa28.9■■■□□ 2.22
PCCB-207ENST00000466072 NPM1P06748 294 aaKnown RBP eCLIP28.88■■■□□ 2.21
PCCB-207ENST00000466072 SAMD9Q5K651 1589 aa28.86■■■□□ 2.21
PCCB-207ENST00000466072 PLB1Q6P1J6 1458 aa28.85■■■□□ 2.21
PCCB-207ENST00000466072 UHRF1BP1LA0JNW5 1464 aa28.82■■■□□ 2.2
PCCB-207ENST00000466072 ABCC2Q92887 1545 aa28.81■■■□□ 2.2
PCCB-207ENST00000466072 FHOD3Q2V2M9 1422 aa28.79■■■□□ 2.2
PCCB-207ENST00000466072 ABCA8O94911 1581 aa28.75■■■□□ 2.19
PCCB-207ENST00000466072 MAPKBP1O60336 1514 aa28.75■■■□□ 2.19
PCCB-207ENST00000466072 KDM5BQ9UGL1 1544 aa28.71■■■□□ 2.19
PCCB-207ENST00000466072 ARID3CA6NKF2 412 aa28.71■■■□□ 2.19
PCCB-207ENST00000466072 FAM69CQ0P6D2 419 aa28.68■■■□□ 2.18
PCCB-207ENST00000466072 EFCAB5A4FU69 1503 aa28.67■■■□□ 2.18
PCCB-207ENST00000466072 ASXL2Q76L83 1435 aa28.67■■■□□ 2.18
PCCB-207ENST00000466072 ABCC10Q5T3U5 1492 aa28.67■■■□□ 2.18
PCCB-207ENST00000466072 ARHGAP35Q9NRY4 1499 aa28.67■■■□□ 2.18
PCCB-207ENST00000466072 ZCCHC11Q5TAX3 1644 aaKnown RBP28.66■■■□□ 2.18
PCCB-207ENST00000466072 KIF13AQ9H1H9 1805 aa28.65■■■□□ 2.18
PCCB-207ENST00000466072 DIP2BQ9P265 1576 aa28.61■■■□□ 2.17
PCCB-207ENST00000466072 LOC105371045A0A1W2PR82 267 aa28.61■■■□□ 2.17
PCCB-207ENST00000466072 RAPGEF6Q8TEU7 1601 aa28.58■■■□□ 2.16
PCCB-207ENST00000466072 ATP10BO94823 1461 aa28.57■■■□□ 2.16
PCCB-207ENST00000466072 NUP153P49790 1475 aaKnown RBP28.54■■■□□ 2.16
PCCB-207ENST00000466072 EPRSP07814 1512 aaKnown RBP28.49■■■□□ 2.15
PCCB-207ENST00000466072 WDR7Q9Y4E6 1490 aa28.49■■■□□ 2.15
PCCB-207ENST00000466072 KCNH8Q96L42 1107 aa28.48■■■□□ 2.15
PCCB-207ENST00000466072 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.47■■■□□ 2.15
PCCB-207ENST00000466072 HNRNPUL2Q1KMD3 747 aaKnown RBP28.47■■■□□ 2.15
PCCB-207ENST00000466072 CLIP1P30622 1438 aa28.47■■■□□ 2.15
PCCB-207ENST00000466072 ATP1B4Q9UN42 357 aaPredicted RBP28.44■■■□□ 2.14
PCCB-207ENST00000466072 FMN1Q68DA7 1419 aa28.44■■■□□ 2.14
PCCB-207ENST00000466072 GLI2P10070 1586 aa28.41■■■□□ 2.14
PCCB-207ENST00000466072 TSPOAP1O95153 1857 aa28.4■■■□□ 2.14
PCCB-207ENST00000466072 CDK13Q14004 1512 aaKnown RBP28.38■■■□□ 2.13
PCCB-207ENST00000466072 CEP162Q5TB80 1403 aa28.36■■■□□ 2.13
PCCB-207ENST00000466072 PPRC1Q5VV67 1664 aaKnown RBP28.31■■■□□ 2.12
PCCB-207ENST00000466072 MAP3K4Q9Y6R4 1608 aa28.31■■■□□ 2.12
PCCB-207ENST00000466072 HECW1Q76N89 1606 aa28.29■■■□□ 2.12
PCCB-207ENST00000466072 PLEKHD1A6NEE1 506 aa28.29■■■□□ 2.12
PCCB-207ENST00000466072 PCF11O94913 1555 aaKnown RBP28.28■■■□□ 2.12
PCCB-207ENST00000466072 CASKIN1Q8WXD9 1431 aa28.26■■■□□ 2.11
PCCB-207ENST00000466072 CD109Q6YHK3 1445 aa28.25■■■□□ 2.11
PCCB-207ENST00000466072 LRRIQ1Q96JM4 1722 aa28.25■■■□□ 2.11
PCCB-207ENST00000466072 CFAP43Q8NDM7 1665 aa28.18■■■□□ 2.1
PCCB-207ENST00000466072 ABCA9Q8IUA7 1624 aa28.16■■■□□ 2.1
PCCB-207ENST00000466072 FYCO1Q9BQS8 1478 aa28.15■■■□□ 2.1
PCCB-207ENST00000466072 COL17A1Q9UMD9 1497 aaPredicted RBP28.15■■■□□ 2.1
PCCB-207ENST00000466072 MAGI3Q5TCQ9 1506 aa28.15■■■□□ 2.1
PCCB-207ENST00000466072 KDM6BO15054 1643 aa28.13■■■□□ 2.09
PCCB-207ENST00000466072 TEX14Q8IWB6 1497 aa28.12■■■□□ 2.09
PCCB-207ENST00000466072 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.11■■■□□ 2.093e-8■■■□□ 16.7
PCCB-207ENST00000466072 CDK11AQ9UQ88 783 aaPredicted RBP28.11■■■□□ 2.09
PCCB-207ENST00000466072 CCDC18Q5T9S5 1454 aa28.08■■■□□ 2.09
PCCB-207ENST00000466072 TTC37Q6PGP7 1564 aa28.07■■■□□ 2.08
PCCB-207ENST00000466072 TROQ12816 1431 aaPredicted RBP28.07■■■□□ 2.08
PCCB-207ENST00000466072 KIF14Q15058 1648 aa28.05■■■□□ 2.08
PCCB-207ENST00000466072 VPS8Q8N3P4 1428 aa27.98■■■□□ 2.07
PCCB-207ENST00000466072 PLCH2O75038 1416 aa27.94■■■□□ 2.06
PCCB-207ENST00000466072 FANCAO15360 1455 aa27.92■■■□□ 2.06
PCCB-207ENST00000466072 NEO1Q92859 1461 aa27.91■■■□□ 2.06
PCCB-207ENST00000466072 RAPGEF3O95398 923 aa27.91■■■□□ 2.06
PCCB-207ENST00000466072 ARAP3Q8WWN8 1544 aa27.91■■■□□ 2.06
PCCB-207ENST00000466072 AKNAQ7Z591 1439 aa27.89■■■□□ 2.05
PCCB-207ENST00000466072 MTUS2Q5JR59 1369 aa27.87■■■□□ 2.05
PCCB-207ENST00000466072 PHLDB1Q86UU1 1377 aa27.86■■■□□ 2.05
PCCB-207ENST00000466072 MYO5CQ9NQX4 1742 aa27.84■■■□□ 2.05
PCCB-207ENST00000466072 EFCAB2Q5VUJ9 269 aa27.82■■■□□ 2.04
PCCB-207ENST00000466072 TIAM1Q13009 1591 aa27.8■■■□□ 2.04
PCCB-207ENST00000466072 ARHGAP5Q13017 1502 aa27.8■■■□□ 2.04
PCCB-207ENST00000466072 KANK4Q5T7N3 995 aaPredicted RBP27.79■■■□□ 2.04
PCCB-207ENST00000466072 FRMPD1Q5SYB0 1578 aa27.79■■■□□ 2.04
PCCB-207ENST00000466072 CDC42BPBQ9Y5S2 1711 aa27.78■■■□□ 2.04
PCCB-207ENST00000466072 ADGRL1O94910 1474 aa27.77■■■□□ 2.04
PCCB-207ENST00000466072 SCAPERQ9BY12 1400 aa27.77■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms