RNA–Protein interactions for RNA: ENST00000465943.1

CAPN10-213, Transcript of calpain 10, humanhuman

TSL 4

Gene CAPN10, Length 549 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN10-213ENST00000465943 IGF1RP08069 1367 aa35.89■■■■□ 3.34
CAPN10-213ENST00000465943 JPH4Q96JJ6 628 aa35.8■■■■□ 3.32
CAPN10-213ENST00000465943 KIAA0586Q9BVV6 1533 aa35.73■■■■□ 3.31
CAPN10-213ENST00000465943 CARMIL1Q5VZK9 1371 aa35.69■■■■□ 3.3
CAPN10-213ENST00000465943 KIF13AQ9H1H9 1805 aa35.57■■■■□ 3.28
CAPN10-213ENST00000465943 ADCY10Q96PN6 1610 aa35.57■■■■□ 3.28
CAPN10-213ENST00000465943 IQGAP2Q13576 1575 aa35.55■■■■□ 3.28
CAPN10-213ENST00000465943 RAPGEF2Q9Y4G8 1499 aa35.46■■■■□ 3.27
CAPN10-213ENST00000465943 MAPKBP1O60336 1514 aa35.4■■■■□ 3.26
CAPN10-213ENST00000465943 CARMIL2Q6F5E8 1435 aa35.36■■■■□ 3.25
CAPN10-213ENST00000465943 CTTNBP2Q8WZ74 1663 aa35.36■■■■□ 3.25
CAPN10-213ENST00000465943 TTBK1Q5TCY1 1321 aaPredicted RBP35.34■■■■□ 3.25
CAPN10-213ENST00000465943 DIP2BQ9P265 1576 aa35.33■■■■□ 3.25
CAPN10-213ENST00000465943 PTPRGP23470 1445 aa35.32■■■■□ 3.25
CAPN10-213ENST00000465943 NPM1P06748 294 aaKnown RBP eCLIP35.32■■■■□ 3.24
CAPN10-213ENST00000465943 DISP1Q96F81 1524 aa35.31■■■■□ 3.24
CAPN10-213ENST00000465943 TNIKQ9UKE5 1360 aa35.3■■■■□ 3.24
CAPN10-213ENST00000465943 ABCC10Q5T3U5 1492 aa35.29■■■■□ 3.24
CAPN10-213ENST00000465943 UGGT2Q9NYU1 1516 aa35.27■■■■□ 3.24
CAPN10-213ENST00000465943 KIAA0556O60303 1618 aa35.25■■■■□ 3.23
CAPN10-213ENST00000465943 FAM69CQ0P6D2 419 aa35.18■■■■□ 3.22
CAPN10-213ENST00000465943 ABCC2Q92887 1545 aa35.16■■■■□ 3.22
CAPN10-213ENST00000465943 PRXQ9BXM0 1461 aa35.15■■■■□ 3.22
CAPN10-213ENST00000465943 TSPOAP1O95153 1857 aa35.13■■■■□ 3.21
CAPN10-213ENST00000465943 UHRF1BP1LA0JNW5 1464 aa35.11■■■■□ 3.21
CAPN10-213ENST00000465943 UACAQ9BZF9 1416 aa35.1■■■■□ 3.21
CAPN10-213ENST00000465943 ZCCHC11Q5TAX3 1644 aaKnown RBP35.03■■■■□ 3.2
CAPN10-213ENST00000465943 ASXL2Q76L83 1435 aa35.01■■■■□ 3.2
CAPN10-213ENST00000465943 GOLGA3Q08378 1498 aa34.97■■■■□ 3.19
CAPN10-213ENST00000465943 KDM5BQ9UGL1 1544 aa34.96■■■■□ 3.19
CAPN10-213ENST00000465943 KDM6BO15054 1643 aa34.95■■■■□ 3.19
CAPN10-213ENST00000465943 PLB1Q6P1J6 1458 aa34.95■■■■□ 3.19
CAPN10-213ENST00000465943 PPRC1Q5VV67 1664 aaKnown RBP34.91■■■■□ 3.18
CAPN10-213ENST00000465943 GLI2P10070 1586 aa34.91■■■■□ 3.18
CAPN10-213ENST00000465943 ABCA8O94911 1581 aa34.87■■■■□ 3.17
CAPN10-213ENST00000465943 CSRNP3Q8WYN3 585 aa34.85■■■■□ 3.17
CAPN10-213ENST00000465943 EEA1Q15075 1411 aa34.81■■■■□ 3.16
CAPN10-213ENST00000465943 EPRSP07814 1512 aaKnown RBP34.81■■■■□ 3.16
CAPN10-213ENST00000465943 MAP3K4Q9Y6R4 1608 aa34.81■■■■□ 3.16
CAPN10-213ENST00000465943 SAMD9Q5K651 1589 aa34.78■■■■□ 3.16
CAPN10-213ENST00000465943 AEBP2Q6ZN18 517 aaPredicted RBP34.77■■■■□ 3.16
CAPN10-213ENST00000465943 WDR7Q9Y4E6 1490 aa34.74■■■■□ 3.15
CAPN10-213ENST00000465943 FAM9AQ8IZU1 332 aaPredicted RBP34.71■■■■□ 3.15
CAPN10-213ENST00000465943 P3H3Q8IVL6 736 aa34.69■■■■□ 3.14
CAPN10-213ENST00000465943 KIF21BO75037 1637 aa34.66■■■■□ 3.14
CAPN10-213ENST00000465943 CFAP43Q8NDM7 1665 aa34.6■■■■□ 3.13
CAPN10-213ENST00000465943 RAPGEF6Q8TEU7 1601 aa34.59■■■■□ 3.13
CAPN10-213ENST00000465943 TEX14Q8IWB6 1497 aa34.58■■■■□ 3.13
CAPN10-213ENST00000465943 ARID3CA6NKF2 412 aa34.56■■■■□ 3.12
CAPN10-213ENST00000465943 RANGAP1P46060 587 aaPredicted RBP34.56■■■■□ 3.12
CAPN10-213ENST00000465943 COL17A1Q9UMD9 1497 aaPredicted RBP34.51■■■■□ 3.11
CAPN10-213ENST00000465943 FHOD3Q2V2M9 1422 aa34.5■■■■□ 3.11
CAPN10-213ENST00000465943 ATP10BO94823 1461 aa34.5■■■■□ 3.11
CAPN10-213ENST00000465943 KCNH8Q96L42 1107 aa34.48■■■■□ 3.11
CAPN10-213ENST00000465943 CHIC1Q5VXU3 224 aa34.47■■■■□ 3.11
CAPN10-213ENST00000465943 CD109Q6YHK3 1445 aa34.44■■■■□ 3.1
CAPN10-213ENST00000465943 EFCAB5A4FU69 1503 aa34.44■■■■□ 3.1
CAPN10-213ENST00000465943 MAGI3Q5TCQ9 1506 aa34.42■■■■□ 3.1
CAPN10-213ENST00000465943 NUP153P49790 1475 aaKnown RBP34.39■■■■□ 3.1
CAPN10-213ENST00000465943 EHMT2Q96KQ7 1210 aa34.39■■■■□ 3.1
CAPN10-213ENST00000465943 ABCA9Q8IUA7 1624 aa34.36■■■■□ 3.09
CAPN10-213ENST00000465943 KDM4FA0A1W2PPD8 638 aa34.31■■■■□ 3.08
CAPN10-213ENST00000465943 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.28■■■■□ 3.08
CAPN10-213ENST00000465943 HNRNPUL2Q1KMD3 747 aaKnown RBP34.28■■■■□ 3.08
CAPN10-213ENST00000465943 ADGRL1O94910 1474 aa34.23■■■■□ 3.07
CAPN10-213ENST00000465943 UBTFP17480 764 aaKnown RBP34.23■■■■□ 3.07
CAPN10-213ENST00000465943 CDK13Q14004 1512 aaKnown RBP34.15■■■■□ 3.06
CAPN10-213ENST00000465943 ARHGAP35Q9NRY4 1499 aa34.15■■■■□ 3.06
CAPN10-213ENST00000465943 ARAP3Q8WWN8 1544 aa34.14■■■■□ 3.06
CAPN10-213ENST00000465943 HECW1Q76N89 1606 aa34.1■■■■□ 3.05
CAPN10-213ENST00000465943 TTC37Q6PGP7 1564 aa34.09■■■■□ 3.05
CAPN10-213ENST00000465943 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.06■■■■□ 3.04
CAPN10-213ENST00000465943 NEO1Q92859 1461 aa34.06■■■■□ 3.04
CAPN10-213ENST00000465943 FMN1Q68DA7 1419 aa34.04■■■■□ 3.04
CAPN10-213ENST00000465943 FRMPD1Q5SYB0 1578 aa34.04■■■■□ 3.04
CAPN10-213ENST00000465943 PLEKHD1A6NEE1 506 aa34.03■■■■□ 3.04
CAPN10-213ENST00000465943 LRRIQ1Q96JM4 1722 aa34.01■■■■□ 3.03
CAPN10-213ENST00000465943 CFAP74Q9C0B2 1584 aa33.99■■■■□ 3.03
CAPN10-213ENST00000465943 PHLDB1Q86UU1 1377 aa33.98■■■■□ 3.03
CAPN10-213ENST00000465943 ATP1B4Q9UN42 357 aaPredicted RBP33.95■■■■□ 3.03
CAPN10-213ENST00000465943 RICTORQ6R327 1708 aa33.93■■■■□ 3.02
CAPN10-213ENST00000465943 FANCAO15360 1455 aa33.91■■■■□ 3.02
CAPN10-213ENST00000465943 RAPGEF3O95398 923 aa33.91■■■■□ 3.02
CAPN10-213ENST00000465943 PCF11O94913 1555 aaKnown RBP33.9■■■■□ 3.02
CAPN10-213ENST00000465943 KIF14Q15058 1648 aa33.89■■■■□ 3.02
CAPN10-213ENST00000465943 MYO5CQ9NQX4 1742 aa33.87■■■■□ 3.01
CAPN10-213ENST00000465943 AKNAQ7Z591 1439 aa33.85■■■■□ 3.01
CAPN10-213ENST00000465943 ARHGEF40Q8TER5 1519 aa33.83■■■■□ 3.01
CAPN10-213ENST00000465943 DENND4BO75064 1496 aaPredicted RBP33.82■■■■□ 3.01
CAPN10-213ENST00000465943 TROQ12816 1431 aaPredicted RBP33.75■■■□□ 2.99
CAPN10-213ENST00000465943 ADAMTSL3P82987 1691 aa33.74■■■□□ 2.99
CAPN10-213ENST00000465943 ZMYM4Q5VZL5 1548 aa33.74■■■□□ 2.99
CAPN10-213ENST00000465943 PLCH2O75038 1416 aa33.74■■■□□ 2.99
CAPN10-213ENST00000465943 BCORL1Q5H9F3 1711 aa33.73■■■□□ 2.99
CAPN10-213ENST00000465943 HECW2Q9P2P5 1572 aa33.72■■■□□ 2.99
CAPN10-213ENST00000465943 CASKIN1Q8WXD9 1431 aa33.72■■■□□ 2.99
CAPN10-213ENST00000465943 CDK11AQ9UQ88 783 aaPredicted RBP33.71■■■□□ 2.99
CAPN10-213ENST00000465943 CLIP1P30622 1438 aa33.7■■■□□ 2.98
CAPN10-213ENST00000465943 CCDC18Q5T9S5 1454 aa33.69■■■□□ 2.98
CAPN10-213ENST00000465943 ZFYVE16Q7Z3T8 1539 aa33.68■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms