RNA–Protein interactions for RNA: ENST00000465887.2

POLR1D-204, Transcript of RNA polymerase I and III subunit D, humanhuman

TSL 2

Gene POLR1D, Length 2,118 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1D-204ENST00000465887 CEP162Q5TB80 1403 aa25.47■■□□□ 1.67
POLR1D-204ENST00000465887 FBLN2P98095 1184 aa25.46■■□□□ 1.67
POLR1D-204ENST00000465887 NUP160Q12769 1436 aa25.41■■□□□ 1.66
POLR1D-204ENST00000465887 IQGAP2Q13576 1575 aa25.41■■□□□ 1.66
POLR1D-204ENST00000465887 RANGAP1P46060 587 aaPredicted RBP25.36■■□□□ 1.65
POLR1D-204ENST00000465887 CLIP1P30622 1438 aa25.36■■□□□ 1.65
POLR1D-204ENST00000465887 KIAA0586Q9BVV6 1533 aa25.35■■□□□ 1.65
POLR1D-204ENST00000465887 ARHGAP35Q9NRY4 1499 aa25.29■■□□□ 1.64
POLR1D-204ENST00000465887 SAMD9Q5K651 1589 aa25.29■■□□□ 1.64
POLR1D-204ENST00000465887 EFCAB5A4FU69 1503 aa25.26■■□□□ 1.63
POLR1D-204ENST00000465887 UGGT2Q9NYU1 1516 aa25.26■■□□□ 1.63
POLR1D-204ENST00000465887 CLASP1Q7Z460 1538 aa25.25■■□□□ 1.63
POLR1D-204ENST00000465887 ARAP1Q96P48 1450 aa25.24■■□□□ 1.63
POLR1D-204ENST00000465887 SHROOM2Q13796 1616 aa25.21■■□□□ 1.63
POLR1D-204ENST00000465887 KIAA0556O60303 1618 aa25.18■■□□□ 1.62
POLR1D-204ENST00000465887 DISP1Q96F81 1524 aa25.16■■□□□ 1.62
POLR1D-204ENST00000465887 FHOD3Q2V2M9 1422 aa25.14■■□□□ 1.62
POLR1D-204ENST00000465887 P3H3Q8IVL6 736 aa25.12■■□□□ 1.61
POLR1D-204ENST00000465887 JPH4Q96JJ6 628 aa25.11■■□□□ 1.61
POLR1D-204ENST00000465887 VPS8Q8N3P4 1428 aa25.09■■□□□ 1.61
POLR1D-204ENST00000465887 ERCC6L2Q5T890 1561 aa25.06■■□□□ 1.6
POLR1D-204ENST00000465887 OSCARQ8IYS5 282 aa25.04■■□□□ 1.6
POLR1D-204ENST00000465887 PRG4Q92954 1404 aaPredicted RBP25.04■■□□□ 1.6
POLR1D-204ENST00000465887 PCF11O94913 1555 aaKnown RBP25.02■■□□□ 1.6
POLR1D-204ENST00000465887 CARMIL2Q6F5E8 1435 aa25■■□□□ 1.59
POLR1D-204ENST00000465887 LRRIQ1Q96JM4 1722 aa24.97■■□□□ 1.59
POLR1D-204ENST00000465887 FMN1Q68DA7 1419 aa24.95■■□□□ 1.59
POLR1D-204ENST00000465887 FYCO1Q9BQS8 1478 aa24.89■■□□□ 1.57
POLR1D-204ENST00000465887 CASKIN1Q8WXD9 1431 aa24.88■■□□□ 1.57
POLR1D-204ENST00000465887 RAPGEF6Q8TEU7 1601 aa24.88■■□□□ 1.57
POLR1D-204ENST00000465887 TTBK1Q5TCY1 1321 aaPredicted RBP24.87■■□□□ 1.57
POLR1D-204ENST00000465887 CFAP43Q8NDM7 1665 aa24.85■■□□□ 1.57
POLR1D-204ENST00000465887 HECW1Q76N89 1606 aa24.84■■□□□ 1.57
POLR1D-204ENST00000465887 ABCA8O94911 1581 aa24.83■■□□□ 1.57
POLR1D-204ENST00000465887 PLB1Q6P1J6 1458 aa24.83■■□□□ 1.57
POLR1D-204ENST00000465887 PTPRGP23470 1445 aa24.8■■□□□ 1.56
POLR1D-204ENST00000465887 TIAM1Q13009 1591 aa24.8■■□□□ 1.56
POLR1D-204ENST00000465887 ARHGEF11O15085 1522 aa24.77■■□□□ 1.56
POLR1D-204ENST00000465887 NUP153P49790 1475 aaKnown RBP24.75■■□□□ 1.55
POLR1D-204ENST00000465887 ATP1B4Q9UN42 357 aaPredicted RBP24.75■■□□□ 1.55
POLR1D-204ENST00000465887 RIMBP3CA6NJZ7 1639 aa24.74■■□□□ 1.55
POLR1D-204ENST00000465887 RIMBP3BA6NNM3 1639 aa24.74■■□□□ 1.55
POLR1D-204ENST00000465887 RIMBP3Q9UFD9 1639 aa24.74■■□□□ 1.55
POLR1D-204ENST00000465887 MAP3K1Q13233 1512 aa24.74■■□□□ 1.55
POLR1D-204ENST00000465887 PPARGC1BQ86YN6 1023 aaKnown RBP24.73■■□□□ 1.55
POLR1D-204ENST00000465887 EPRSP07814 1512 aaKnown RBP24.72■■□□□ 1.55
POLR1D-204ENST00000465887 CDK13Q14004 1512 aaKnown RBP24.72■■□□□ 1.55
POLR1D-204ENST00000465887 CCDC18Q5T9S5 1454 aa24.69■■□□□ 1.54
POLR1D-204ENST00000465887 APLP2Q06481 763 aa24.68■■□□□ 1.54
POLR1D-204ENST00000465887 UACAQ9BZF9 1416 aa24.68■■□□□ 1.54
POLR1D-204ENST00000465887 ABCC2Q92887 1545 aa24.68■■□□□ 1.54
POLR1D-204ENST00000465887 ADCY10Q96PN6 1610 aa24.66■■□□□ 1.54
POLR1D-204ENST00000465887 ARID3CA6NKF2 412 aa24.65■■□□□ 1.54
POLR1D-204ENST00000465887 KANK4Q5T7N3 995 aaPredicted RBP24.64■■□□□ 1.54
POLR1D-204ENST00000465887 MAGI3Q5TCQ9 1506 aa24.63■■□□□ 1.53
POLR1D-204ENST00000465887 LRRC9Q6ZRR7 1453 aa24.63■■□□□ 1.53
POLR1D-204ENST00000465887 UHRF1BP1LA0JNW5 1464 aa24.61■■□□□ 1.53
POLR1D-204ENST00000465887 ZCCHC11Q5TAX3 1644 aaKnown RBP24.59■■□□□ 1.53
POLR1D-204ENST00000465887 ATP10BO94823 1461 aa24.59■■□□□ 1.53
POLR1D-204ENST00000465887 EHBP1L1Q8N3D4 1523 aa24.55■■□□□ 1.52
POLR1D-204ENST00000465887 KDM5BQ9UGL1 1544 aa24.53■■□□□ 1.52
POLR1D-204ENST00000465887 SUPT6HQ7KZ85 1726 aaKnown RBP24.52■■□□□ 1.52
POLR1D-204ENST00000465887 MTUS2Q5JR59 1369 aa24.5■■□□□ 1.51
POLR1D-204ENST00000465887 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.49■■□□□ 1.51
POLR1D-204ENST00000465887 HNRNPUL2Q1KMD3 747 aaKnown RBP24.49■■□□□ 1.51
POLR1D-204ENST00000465887 KIF14Q15058 1648 aa24.46■■□□□ 1.51
POLR1D-204ENST00000465887 TROQ12816 1431 aaPredicted RBP24.43■■□□□ 1.5
POLR1D-204ENST00000465887 CYB5RLQ6IPT4 315 aa24.43■■□□□ 1.5
POLR1D-204ENST00000465887 NCOA2Q15596 1464 aa24.41■■□□□ 1.5
POLR1D-204ENST00000465887 CDK11AQ9UQ88 783 aaPredicted RBP24.39■■□□□ 1.49
POLR1D-204ENST00000465887 PHLDB1Q86UU1 1377 aa24.37■■□□□ 1.49
POLR1D-204ENST00000465887 PLEKHD1A6NEE1 506 aa24.35■■□□□ 1.49
POLR1D-204ENST00000465887 CDC42BPAQ5VT25 1732 aa24.33■■□□□ 1.49
POLR1D-204ENST00000465887 TRIM26Q12899 539 aaPredicted RBP24.31■■□□□ 1.48
POLR1D-204ENST00000465887 WDR7Q9Y4E6 1490 aa24.3■■□□□ 1.48
POLR1D-204ENST00000465887 ITSN2Q9NZM3 1697 aa24.3■■□□□ 1.48
POLR1D-204ENST00000465887 TTC37Q6PGP7 1564 aa24.3■■□□□ 1.48
POLR1D-204ENST00000465887 ABCC10Q5T3U5 1492 aa24.29■■□□□ 1.48
POLR1D-204ENST00000465887 ASXL2Q76L83 1435 aa24.29■■□□□ 1.48
POLR1D-204ENST00000465887 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.27■■□□□ 1.48
POLR1D-204ENST00000465887 RRBP1Q9P2E9 1410 aaKnown RBP24.27■■□□□ 1.48
POLR1D-204ENST00000465887 MYOM3Q5VTT5 1437 aa24.26■■□□□ 1.47
POLR1D-204ENST00000465887 MAPKBP1O60336 1514 aa24.25■■□□□ 1.47
POLR1D-204ENST00000465887 NPM1P06748 294 aaKnown RBP eCLIP24.25■■□□□ 1.47
POLR1D-204ENST00000465887 MYO5CQ9NQX4 1742 aa24.25■■□□□ 1.47
POLR1D-204ENST00000465887 CDC42BPBQ9Y5S2 1711 aa24.25■■□□□ 1.47
POLR1D-204ENST00000465887 FGD6Q6ZV73 1430 aa24.22■■□□□ 1.47
POLR1D-204ENST00000465887 DNAJC5Q9H3Z4 198 aa24.22■■□□□ 1.47
POLR1D-204ENST00000465887 PREX2Q70Z35 1606 aa24.22■■□□□ 1.47
POLR1D-204ENST00000465887 PTPN23Q9H3S7 1636 aa24.22■■□□□ 1.47
POLR1D-204ENST00000465887 GPATCH8Q9UKJ3 1502 aaKnown RBP24.2■■□□□ 1.47
POLR1D-204ENST00000465887 KCNH8Q96L42 1107 aa24.2■■□□□ 1.46
POLR1D-204ENST00000465887 PCGF6Q9BYE7 350 aa24.2■■□□□ 1.46
POLR1D-204ENST00000465887 ABCA9Q8IUA7 1624 aa24.2■■□□□ 1.46
POLR1D-204ENST00000465887 CCNB3Q8WWL7 1395 aa24.2■■□□□ 1.46
POLR1D-204ENST00000465887 HRCP23327 699 aa24.14■■□□□ 1.46
POLR1D-204ENST00000465887 MIA2Q96PC5 1412 aa24.14■■□□□ 1.45
POLR1D-204ENST00000465887 TCOF1Q13428 1488 aaKnown RBP24.12■■□□□ 1.45
POLR1D-204ENST00000465887 DIP2BQ9P265 1576 aa24.09■■□□□ 1.45
POLR1D-204ENST00000465887 KIF13AQ9H1H9 1805 aa24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms