RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 KIAA0586Q9BVV6 1533 aa21.88■■□□□ 1.09
COL5A1-206ENST00000465877 RAPGEF2Q9Y4G8 1499 aa21.88■■□□□ 1.09
COL5A1-206ENST00000465877 IQGAP2Q13576 1575 aa21.87■■□□□ 1.09
COL5A1-206ENST00000465877 CYB5RLQ6IPT4 315 aa21.82■■□□□ 1.08
COL5A1-206ENST00000465877 PRG4Q92954 1404 aaPredicted RBP21.81■■□□□ 1.08
COL5A1-206ENST00000465877 PRXQ9BXM0 1461 aa21.8■■□□□ 1.08
COL5A1-206ENST00000465877 EEA1Q15075 1411 aa21.78■■□□□ 1.08
COL5A1-206ENST00000465877 JPH4Q96JJ6 628 aa21.73■■□□□ 1.07
COL5A1-206ENST00000465877 CHIC1Q5VXU3 224 aa21.71■■□□□ 1.07
COL5A1-206ENST00000465877 UGGT2Q9NYU1 1516 aa21.7■■□□□ 1.07
COL5A1-206ENST00000465877 KIF21BO75037 1637 aa21.69■■□□□ 1.06
COL5A1-206ENST00000465877 KIAA0556O60303 1618 aa21.68■■□□□ 1.06
COL5A1-206ENST00000465877 DISP1Q96F81 1524 aa21.65■■□□□ 1.06
COL5A1-206ENST00000465877 ADCY10Q96PN6 1610 aa21.63■■□□□ 1.05
COL5A1-206ENST00000465877 CARMIL2Q6F5E8 1435 aa21.63■■□□□ 1.05
COL5A1-206ENST00000465877 CSRNP3Q8WYN3 585 aa21.61■■□□□ 1.05
COL5A1-206ENST00000465877 TNIKQ9UKE5 1360 aa21.55■■□□□ 1.04
COL5A1-206ENST00000465877 FAM9AQ8IZU1 332 aaPredicted RBP21.54■■□□□ 1.04
COL5A1-206ENST00000465877 SAMD9Q5K651 1589 aa21.53■■□□□ 1.04
COL5A1-206ENST00000465877 GOLGA3Q08378 1498 aa21.53■■□□□ 1.04
COL5A1-206ENST00000465877 PTPRGP23470 1445 aa21.5■■□□□ 1.03
COL5A1-206ENST00000465877 KIF13AQ9H1H9 1805 aa21.49■■□□□ 1.03
COL5A1-206ENST00000465877 MAPKBP1O60336 1514 aa21.48■■□□□ 1.03
COL5A1-206ENST00000465877 ABCC2Q92887 1545 aa21.48■■□□□ 1.03
COL5A1-206ENST00000465877 UHRF1BP1LA0JNW5 1464 aa21.44■■□□□ 1.02
COL5A1-206ENST00000465877 TTBK1Q5TCY1 1321 aaPredicted RBP21.42■■□□□ 1.02
COL5A1-206ENST00000465877 ZCCHC11Q5TAX3 1644 aaKnown RBP21.41■■□□□ 1.02
COL5A1-206ENST00000465877 ABCA8O94911 1581 aa21.4■■□□□ 1.02
COL5A1-206ENST00000465877 EFCAB5A4FU69 1503 aa21.4■■□□□ 1.02
COL5A1-206ENST00000465877 UACAQ9BZF9 1416 aa21.4■■□□□ 1.02
COL5A1-206ENST00000465877 TRHP20396 242 aaPredicted RBP21.4■■□□□ 1.02
COL5A1-206ENST00000465877 DIP2BQ9P265 1576 aa21.4■■□□□ 1.02
COL5A1-206ENST00000465877 PLB1Q6P1J6 1458 aa21.36■■□□□ 1.01
COL5A1-206ENST00000465877 KDM5BQ9UGL1 1544 aa21.34■■□□□ 1.01
COL5A1-206ENST00000465877 RAPGEF6Q8TEU7 1601 aa21.32■■□□□ 1
COL5A1-206ENST00000465877 ABCC10Q5T3U5 1492 aa21.32■■□□□ 1
COL5A1-206ENST00000465877 NPM1P06748 294 aaKnown RBP eCLIP21.31■■□□□ 1
COL5A1-206ENST00000465877 FHOD3Q2V2M9 1422 aa21.29■■□□□ 1
COL5A1-206ENST00000465877 EHMT2Q96KQ7 1210 aa21.27■■□□□ 1
COL5A1-206ENST00000465877 ASXL2Q76L83 1435 aa21.25■□□□□ 0.99
COL5A1-206ENST00000465877 P3H3Q8IVL6 736 aa21.24■□□□□ 0.99
COL5A1-206ENST00000465877 UBTFP17480 764 aaKnown RBP21.23■□□□□ 0.99
COL5A1-206ENST00000465877 TSPOAP1O95153 1857 aa21.23■□□□□ 0.99
COL5A1-206ENST00000465877 RANGAP1P46060 587 aaPredicted RBP21.22■□□□□ 0.99
COL5A1-206ENST00000465877 ARHGAP35Q9NRY4 1499 aa21.21■□□□□ 0.99
COL5A1-206ENST00000465877 GLI2P10070 1586 aa21.21■□□□□ 0.99
COL5A1-206ENST00000465877 WDR7Q9Y4E6 1490 aa21.19■□□□□ 0.98
COL5A1-206ENST00000465877 MAP3K4Q9Y6R4 1608 aa21.18■□□□□ 0.98
COL5A1-206ENST00000465877 PPRC1Q5VV67 1664 aaKnown RBP21.18■□□□□ 0.98
COL5A1-206ENST00000465877 EPRSP07814 1512 aaKnown RBP21.16■□□□□ 0.98
COL5A1-206ENST00000465877 NUP153P49790 1475 aaKnown RBP21.16■□□□□ 0.98
COL5A1-206ENST00000465877 HECW1Q76N89 1606 aa21.14■□□□□ 0.97
COL5A1-206ENST00000465877 CFAP43Q8NDM7 1665 aa21.13■□□□□ 0.97
COL5A1-206ENST00000465877 FAM69CQ0P6D2 419 aa21.13■□□□□ 0.97
COL5A1-206ENST00000465877 ATP10BO94823 1461 aa21.12■□□□□ 0.97
COL5A1-206ENST00000465877 LRRIQ1Q96JM4 1722 aa21.1■□□□□ 0.97
COL5A1-206ENST00000465877 FMN1Q68DA7 1419 aa21.1■□□□□ 0.97
COL5A1-206ENST00000465877 PCF11O94913 1555 aaKnown RBP21.09■□□□□ 0.97
COL5A1-206ENST00000465877 KDM6BO15054 1643 aa21.05■□□□□ 0.96
COL5A1-206ENST00000465877 CDK13Q14004 1512 aaKnown RBP21.04■□□□□ 0.96
COL5A1-206ENST00000465877 ABCA9Q8IUA7 1624 aa21.04■□□□□ 0.96
COL5A1-206ENST00000465877 ARID3CA6NKF2 412 aa21.04■□□□□ 0.96
COL5A1-206ENST00000465877 CLIP1P30622 1438 aa21.03■□□□□ 0.96
COL5A1-206ENST00000465877 TEX14Q8IWB6 1497 aa20.99■□□□□ 0.95
COL5A1-206ENST00000465877 CEP162Q5TB80 1403 aa20.95■□□□□ 0.95
COL5A1-206ENST00000465877 FYCO1Q9BQS8 1478 aa20.95■□□□□ 0.94
COL5A1-206ENST00000465877 MAGI3Q5TCQ9 1506 aa20.94■□□□□ 0.94
COL5A1-206ENST00000465877 TTC37Q6PGP7 1564 aa20.93■□□□□ 0.94
COL5A1-206ENST00000465877 CASKIN1Q8WXD9 1431 aa20.93■□□□□ 0.94
COL5A1-206ENST00000465877 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.92■□□□□ 0.94
COL5A1-206ENST00000465877 HNRNPUL2Q1KMD3 747 aaKnown RBP20.92■□□□□ 0.94
COL5A1-206ENST00000465877 CCDC18Q5T9S5 1454 aa20.92■□□□□ 0.94
COL5A1-206ENST00000465877 CD109Q6YHK3 1445 aa20.91■□□□□ 0.94
COL5A1-206ENST00000465877 KIF14Q15058 1648 aa20.89■□□□□ 0.94
COL5A1-206ENST00000465877 KCNH8Q96L42 1107 aa20.89■□□□□ 0.93
COL5A1-206ENST00000465877 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.88■□□□□ 0.93
COL5A1-206ENST00000465877 MYO5CQ9NQX4 1742 aa20.87■□□□□ 0.93
COL5A1-206ENST00000465877 CFAP74Q9C0B2 1584 aa20.87■□□□□ 0.93
COL5A1-206ENST00000465877 ATP1B4Q9UN42 357 aaPredicted RBP20.83■□□□□ 0.93
COL5A1-206ENST00000465877 PLEKHD1A6NEE1 506 aa20.81■□□□□ 0.92
COL5A1-206ENST00000465877 TROQ12816 1431 aaPredicted RBP20.8■□□□□ 0.92
COL5A1-206ENST00000465877 COL17A1Q9UMD9 1497 aaPredicted RBP20.8■□□□□ 0.92
COL5A1-206ENST00000465877 NEO1Q92859 1461 aa20.78■□□□□ 0.92
COL5A1-206ENST00000465877 LOC105371045A0A1W2PR82 267 aa20.78■□□□□ 0.92
COL5A1-206ENST00000465877 PREX2Q70Z35 1606 aa20.76■□□□□ 0.91
COL5A1-206ENST00000465877 ARAP3Q8WWN8 1544 aa20.75■□□□□ 0.91
COL5A1-206ENST00000465877 FRMPD1Q5SYB0 1578 aa20.75■□□□□ 0.91
COL5A1-206ENST00000465877 CDC42BPAQ5VT25 1732 aa20.74■□□□□ 0.91
COL5A1-206ENST00000465877 RICTORQ6R327 1708 aa20.74■□□□□ 0.91
COL5A1-206ENST00000465877 CDC42BPBQ9Y5S2 1711 aa20.73■□□□□ 0.91
COL5A1-206ENST00000465877 CDK11AQ9UQ88 783 aaPredicted RBP20.73■□□□□ 0.91
COL5A1-206ENST00000465877 FANCAO15360 1455 aa20.73■□□□□ 0.91
COL5A1-206ENST00000465877 VPS8Q8N3P4 1428 aa20.7■□□□□ 0.9
COL5A1-206ENST00000465877 EHBP1L1Q8N3D4 1523 aa20.7■□□□□ 0.9
COL5A1-206ENST00000465877 PHLDB1Q86UU1 1377 aa20.69■□□□□ 0.9
COL5A1-206ENST00000465877 TIAM1Q13009 1591 aa20.68■□□□□ 0.9
COL5A1-206ENST00000465877 PLCH2O75038 1416 aa20.67■□□□□ 0.9
COL5A1-206ENST00000465877 ARHGAP5Q13017 1502 aa20.67■□□□□ 0.9
COL5A1-206ENST00000465877 ITSN2Q9NZM3 1697 aa20.64■□□□□ 0.9
COL5A1-206ENST00000465877 AKNAQ7Z591 1439 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms