RNA–Protein interactions for RNA: ENST00000465788.1

SRM-203, Transcript of spermidine synthase, humanhuman

TSL 5

Gene SRM, Length 402 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-203ENST00000465788 CUL7Q14999 1698 aa22.39■■□□□ 1.17
SRM-203ENST00000465788 IGF1RP08069 1367 aa22.33■■□□□ 1.17
SRM-203ENST00000465788 KIAA0586Q9BVV6 1533 aa22.31■■□□□ 1.16
SRM-203ENST00000465788 NPM1P06748 294 aaKnown RBP eCLIP22.24■■□□□ 1.15
SRM-203ENST00000465788 CARMIL1Q5VZK9 1371 aa22.21■■□□□ 1.15
SRM-203ENST00000465788 KIF13AQ9H1H9 1805 aa22.2■■□□□ 1.14
SRM-203ENST00000465788 MAPKBP1O60336 1514 aa22.18■■□□□ 1.14
SRM-203ENST00000465788 ADCY10Q96PN6 1610 aa22.14■■□□□ 1.14
SRM-203ENST00000465788 CARMIL2Q6F5E8 1435 aa22.14■■□□□ 1.13
SRM-203ENST00000465788 ABCC10Q5T3U5 1492 aa22.13■■□□□ 1.13
SRM-203ENST00000465788 IQGAP2Q13576 1575 aa22.1■■□□□ 1.13
SRM-203ENST00000465788 AEBP2Q6ZN18 517 aaPredicted RBP22.09■■□□□ 1.13
SRM-203ENST00000465788 PTPRGP23470 1445 aa22.08■■□□□ 1.13
SRM-203ENST00000465788 FAM69CQ0P6D2 419 aa22.07■■□□□ 1.12
SRM-203ENST00000465788 TNIKQ9UKE5 1360 aa22.07■■□□□ 1.12
SRM-203ENST00000465788 DIP2BQ9P265 1576 aa22.06■■□□□ 1.12
SRM-203ENST00000465788 RAPGEF2Q9Y4G8 1499 aa22.03■■□□□ 1.12
SRM-203ENST00000465788 ABCC2Q92887 1545 aa21.98■■□□□ 1.11
SRM-203ENST00000465788 UHRF1BP1LA0JNW5 1464 aa21.96■■□□□ 1.11
SRM-203ENST00000465788 UGGT2Q9NYU1 1516 aa21.96■■□□□ 1.11
SRM-203ENST00000465788 PLB1Q6P1J6 1458 aa21.93■■□□□ 1.1
SRM-203ENST00000465788 DISP1Q96F81 1524 aa21.93■■□□□ 1.1
SRM-203ENST00000465788 UACAQ9BZF9 1416 aa21.92■■□□□ 1.1
SRM-203ENST00000465788 TTBK1Q5TCY1 1321 aaPredicted RBP21.91■■□□□ 1.1
SRM-203ENST00000465788 KDM6BO15054 1643 aa21.89■■□□□ 1.09
SRM-203ENST00000465788 TSPOAP1O95153 1857 aa21.89■■□□□ 1.09
SRM-203ENST00000465788 CTTNBP2Q8WZ74 1663 aa21.88■■□□□ 1.09
SRM-203ENST00000465788 KIAA0556O60303 1618 aa21.88■■□□□ 1.09
SRM-203ENST00000465788 ASXL2Q76L83 1435 aa21.87■■□□□ 1.09
SRM-203ENST00000465788 GLI2P10070 1586 aa21.87■■□□□ 1.09
SRM-203ENST00000465788 GOLGA3Q08378 1498 aa21.84■■□□□ 1.09
SRM-203ENST00000465788 KDM5BQ9UGL1 1544 aa21.84■■□□□ 1.09
SRM-203ENST00000465788 PRXQ9BXM0 1461 aa21.78■■□□□ 1.08
SRM-203ENST00000465788 ZCCHC11Q5TAX3 1644 aaKnown RBP21.77■■□□□ 1.07
SRM-203ENST00000465788 EPRSP07814 1512 aaKnown RBP21.75■■□□□ 1.07
SRM-203ENST00000465788 FAM9AQ8IZU1 332 aaPredicted RBP21.74■■□□□ 1.07
SRM-203ENST00000465788 PPRC1Q5VV67 1664 aaKnown RBP21.73■■□□□ 1.07
SRM-203ENST00000465788 TEX14Q8IWB6 1497 aa21.73■■□□□ 1.07
SRM-203ENST00000465788 MAP3K4Q9Y6R4 1608 aa21.72■■□□□ 1.07
SRM-203ENST00000465788 WDR7Q9Y4E6 1490 aa21.69■■□□□ 1.06
SRM-203ENST00000465788 ABCA8O94911 1581 aa21.67■■□□□ 1.06
SRM-203ENST00000465788 EEA1Q15075 1411 aa21.63■■□□□ 1.05
SRM-203ENST00000465788 CSRNP3Q8WYN3 585 aa21.61■■□□□ 1.05
SRM-203ENST00000465788 CFAP43Q8NDM7 1665 aa21.6■■□□□ 1.05
SRM-203ENST00000465788 MAGI3Q5TCQ9 1506 aa21.56■■□□□ 1.04
SRM-203ENST00000465788 KDM4FA0A1W2PPD8 638 aa21.56■■□□□ 1.04
SRM-203ENST00000465788 CD109Q6YHK3 1445 aa21.55■■□□□ 1.04
SRM-203ENST00000465788 SAMD9Q5K651 1589 aa21.53■■□□□ 1.04
SRM-203ENST00000465788 COL17A1Q9UMD9 1497 aaPredicted RBP21.52■■□□□ 1.04
SRM-203ENST00000465788 KCNH8Q96L42 1107 aa21.5■■□□□ 1.03
SRM-203ENST00000465788 ATP10BO94823 1461 aa21.46■■□□□ 1.03
SRM-203ENST00000465788 P3H3Q8IVL6 736 aa21.46■■□□□ 1.03
SRM-203ENST00000465788 RAPGEF6Q8TEU7 1601 aa21.46■■□□□ 1.03
SRM-203ENST00000465788 ADGRL1O94910 1474 aa21.45■■□□□ 1.03
SRM-203ENST00000465788 PHLDB1Q86UU1 1377 aa21.43■■□□□ 1.02
SRM-203ENST00000465788 ABCA9Q8IUA7 1624 aa21.41■■□□□ 1.02
SRM-203ENST00000465788 KIF21BO75037 1637 aa21.4■■□□□ 1.02
SRM-203ENST00000465788 ARAP3Q8WWN8 1544 aa21.39■■□□□ 1.02
SRM-203ENST00000465788 EFCAB5A4FU69 1503 aa21.38■■□□□ 1.01
SRM-203ENST00000465788 ARID3CA6NKF2 412 aa21.36■■□□□ 1.01
SRM-203ENST00000465788 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.35■■□□□ 1.01
SRM-203ENST00000465788 HNRNPUL2Q1KMD3 747 aaKnown RBP21.35■■□□□ 1.01
SRM-203ENST00000465788 NUP153P49790 1475 aaKnown RBP21.33■■□□□ 1.01
SRM-203ENST00000465788 NEO1Q92859 1461 aa21.32■■□□□ 1
SRM-203ENST00000465788 FHOD3Q2V2M9 1422 aa21.32■■□□□ 1
SRM-203ENST00000465788 PLEKHD1A6NEE1 506 aa21.28■■□□□ 1
SRM-203ENST00000465788 RANGAP1P46060 587 aaPredicted RBP21.28■■□□□ 1
SRM-203ENST00000465788 CFAP74Q9C0B2 1584 aa21.23■□□□□ 0.99
SRM-203ENST00000465788 UBTFP17480 764 aaKnown RBP21.19■□□□□ 0.98
SRM-203ENST00000465788 FMN1Q68DA7 1419 aa21.19■□□□□ 0.98
SRM-203ENST00000465788 HECW2Q9P2P5 1572 aa21.16■□□□□ 0.98
SRM-203ENST00000465788 RAPGEF3O95398 923 aa21.16■□□□□ 0.98
SRM-203ENST00000465788 DENND4BO75064 1496 aaPredicted RBP21.15■□□□□ 0.98
SRM-203ENST00000465788 CHIC1Q5VXU3 224 aa21.15■□□□□ 0.98
SRM-203ENST00000465788 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.14■□□□□ 0.98
SRM-203ENST00000465788 FANCAO15360 1455 aa21.14■□□□□ 0.98
SRM-203ENST00000465788 HECW1Q76N89 1606 aa21.14■□□□□ 0.97
SRM-203ENST00000465788 FRMPD1Q5SYB0 1578 aa21.14■□□□□ 0.97
SRM-203ENST00000465788 AKNAQ7Z591 1439 aa21.13■□□□□ 0.97
SRM-203ENST00000465788 CDK11AQ9UQ88 783 aaPredicted RBP21.11■□□□□ 0.97
SRM-203ENST00000465788 RICTORQ6R327 1708 aa21.11■□□□□ 0.97
SRM-203ENST00000465788 ADAMTSL3P82987 1691 aa21.11■□□□□ 0.97
SRM-203ENST00000465788 TTC37Q6PGP7 1564 aa21.1■□□□□ 0.97
SRM-203ENST00000465788 CDK13Q14004 1512 aaKnown RBP21.09■□□□□ 0.97
SRM-203ENST00000465788 ARHGEF40Q8TER5 1519 aa21.09■□□□□ 0.97
SRM-203ENST00000465788 ARHGAP35Q9NRY4 1499 aa21.08■□□□□ 0.97
SRM-203ENST00000465788 BCORL1Q5H9F3 1711 aa21.07■□□□□ 0.96
SRM-203ENST00000465788 ZMYM4Q5VZL5 1548 aa21.07■□□□□ 0.96
SRM-203ENST00000465788 MAGI2Q86UL8 1455 aa21.06■□□□□ 0.96
SRM-203ENST00000465788 ARID4BQ4LE39 1312 aaPredicted RBP21.05■□□□□ 0.96
SRM-203ENST00000465788 PLCH2O75038 1416 aa21.04■□□□□ 0.96
SRM-203ENST00000465788 ATP1B4Q9UN42 357 aaPredicted RBP21.04■□□□□ 0.96
SRM-203ENST00000465788 PTPRMP28827 1452 aa21.04■□□□□ 0.96
SRM-203ENST00000465788 MYO5CQ9NQX4 1742 aa21.03■□□□□ 0.96
SRM-203ENST00000465788 POGZQ7Z3K3 1410 aa21.03■□□□□ 0.96
SRM-203ENST00000465788 EHMT2Q96KQ7 1210 aa21.02■□□□□ 0.96
SRM-203ENST00000465788 KIF14Q15058 1648 aa21.01■□□□□ 0.95
SRM-203ENST00000465788 CLIP1P30622 1438 aa21.01■□□□□ 0.95
SRM-203ENST00000465788 ZFYVE16Q7Z3T8 1539 aa21■□□□□ 0.95
SRM-203ENST00000465788 TROQ12816 1431 aaPredicted RBP20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms