RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 CEP170Q5SW79 1584 aa27.41■■□□□ 1.98
EXOSC3-203ENST00000465229 TNIKQ9UKE5 1360 aa27.36■■□□□ 1.97
EXOSC3-203ENST00000465229 KIAA0586Q9BVV6 1533 aa27.35■■□□□ 1.97
EXOSC3-203ENST00000465229 CLASP1Q7Z460 1538 aa27.26■■□□□ 1.95
EXOSC3-203ENST00000465229 CTTNBP2Q8WZ74 1663 aa27.26■■□□□ 1.95
EXOSC3-203ENST00000465229 JPH4Q96JJ6 628 aa27.26■■□□□ 1.95
EXOSC3-203ENST00000465229 IQGAP2Q13576 1575 aa27.24■■□□□ 1.95
EXOSC3-203ENST00000465229 RANGAP1P46060 587 aaPredicted RBP27.23■■□□□ 1.95
EXOSC3-203ENST00000465229 UGGT2Q9NYU1 1516 aa27.14■■□□□ 1.94
EXOSC3-203ENST00000465229 CEP162Q5TB80 1403 aa27.12■■□□□ 1.93
EXOSC3-203ENST00000465229 SHROOM2Q13796 1616 aa27.11■■□□□ 1.93
EXOSC3-203ENST00000465229 PRG4Q92954 1404 aaPredicted RBP27.1■■□□□ 1.93
EXOSC3-203ENST00000465229 CLIP1P30622 1438 aa27.08■■□□□ 1.93
EXOSC3-203ENST00000465229 DISP1Q96F81 1524 aa27.06■■□□□ 1.92
EXOSC3-203ENST00000465229 P3H3Q8IVL6 736 aa27.05■■□□□ 1.92
EXOSC3-203ENST00000465229 ARHGAP35Q9NRY4 1499 aa27.04■■□□□ 1.92
EXOSC3-203ENST00000465229 CARMIL2Q6F5E8 1435 aa27.03■■□□□ 1.92
EXOSC3-203ENST00000465229 SAMD9Q5K651 1589 aa27.01■■□□□ 1.91
EXOSC3-203ENST00000465229 EFCAB5A4FU69 1503 aa27■■□□□ 1.91
EXOSC3-203ENST00000465229 ERCC6L2Q5T890 1561 aa26.99■■□□□ 1.91
EXOSC3-203ENST00000465229 KIAA0556O60303 1618 aa26.97■■□□□ 1.91
EXOSC3-203ENST00000465229 FHOD3Q2V2M9 1422 aa26.95■■□□□ 1.9
EXOSC3-203ENST00000465229 ARAP1Q96P48 1450 aa26.93■■□□□ 1.9
EXOSC3-203ENST00000465229 ARHGEF11O15085 1522 aa26.91■■□□□ 1.9
EXOSC3-203ENST00000465229 TTBK1Q5TCY1 1321 aaPredicted RBP26.9■■□□□ 1.9
EXOSC3-203ENST00000465229 PTPRGP23470 1445 aa26.87■■□□□ 1.89
EXOSC3-203ENST00000465229 DNAJC5Q9H3Z4 198 aa26.87■■□□□ 1.89
EXOSC3-203ENST00000465229 RIMBP3CA6NJZ7 1639 aa26.81■■□□□ 1.88
EXOSC3-203ENST00000465229 RIMBP3BA6NNM3 1639 aa26.81■■□□□ 1.88
EXOSC3-203ENST00000465229 RIMBP3Q9UFD9 1639 aa26.81■■□□□ 1.88
EXOSC3-203ENST00000465229 FMN1Q68DA7 1419 aa26.79■■□□□ 1.88
EXOSC3-203ENST00000465229 VPS8Q8N3P4 1428 aa26.73■■□□□ 1.87
EXOSC3-203ENST00000465229 CYB5RLQ6IPT4 315 aa26.72■■□□□ 1.87
EXOSC3-203ENST00000465229 PLB1Q6P1J6 1458 aa26.72■■□□□ 1.87
EXOSC3-203ENST00000465229 UACAQ9BZF9 1416 aa26.69■■□□□ 1.86
EXOSC3-203ENST00000465229 CASKIN1Q8WXD9 1431 aa26.67■■□□□ 1.86
EXOSC3-203ENST00000465229 ATP1B4Q9UN42 357 aaPredicted RBP26.66■■□□□ 1.86
EXOSC3-203ENST00000465229 ABCA8O94911 1581 aa26.66■■□□□ 1.86
EXOSC3-203ENST00000465229 PCF11O94913 1555 aaKnown RBP26.61■■□□□ 1.85
EXOSC3-203ENST00000465229 RAPGEF6Q8TEU7 1601 aa26.61■■□□□ 1.85
EXOSC3-203ENST00000465229 UHRF1BP1LA0JNW5 1464 aa26.6■■□□□ 1.85
EXOSC3-203ENST00000465229 FYCO1Q9BQS8 1478 aa26.6■■□□□ 1.85
EXOSC3-203ENST00000465229 ABCC2Q92887 1545 aa26.59■■□□□ 1.85
EXOSC3-203ENST00000465229 NUP153P49790 1475 aaKnown RBP26.59■■□□□ 1.85
EXOSC3-203ENST00000465229 ARID3CA6NKF2 412 aa26.57■■□□□ 1.84
EXOSC3-203ENST00000465229 ADCY10Q96PN6 1610 aa26.54■■□□□ 1.84
EXOSC3-203ENST00000465229 HECW1Q76N89 1606 aa26.53■■□□□ 1.84
EXOSC3-203ENST00000465229 EPRSP07814 1512 aaKnown RBP26.51■■□□□ 1.83
EXOSC3-203ENST00000465229 ATP10BO94823 1461 aa26.51■■□□□ 1.83
EXOSC3-203ENST00000465229 KDM5BQ9UGL1 1544 aa26.48■■□□□ 1.83
EXOSC3-203ENST00000465229 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.47■■□□□ 1.83
EXOSC3-203ENST00000465229 HNRNPUL2Q1KMD3 747 aaKnown RBP26.47■■□□□ 1.83
EXOSC3-203ENST00000465229 APLP2Q06481 763 aa26.47■■□□□ 1.83
EXOSC3-203ENST00000465229 CDK13Q14004 1512 aaKnown RBP26.46■■□□□ 1.83
EXOSC3-203ENST00000465229 NPM1P06748 294 aaKnown RBP eCLIP26.45■■□□□ 1.82
EXOSC3-203ENST00000465229 CCDC18Q5T9S5 1454 aa26.44■■□□□ 1.82
EXOSC3-203ENST00000465229 LRRIQ1Q96JM4 1722 aa26.43■■□□□ 1.82
EXOSC3-203ENST00000465229 MAP3K1Q13233 1512 aa26.39■■□□□ 1.82
EXOSC3-203ENST00000465229 ZCCHC11Q5TAX3 1644 aaKnown RBP26.38■■□□□ 1.81
EXOSC3-203ENST00000465229 TIAM1Q13009 1591 aa26.37■■□□□ 1.81
EXOSC3-203ENST00000465229 KANK4Q5T7N3 995 aaPredicted RBP26.37■■□□□ 1.81
EXOSC3-203ENST00000465229 CDK11AQ9UQ88 783 aaPredicted RBP26.37■■□□□ 1.81
EXOSC3-203ENST00000465229 PLEKHD1A6NEE1 506 aa26.36■■□□□ 1.81
EXOSC3-203ENST00000465229 CFAP43Q8NDM7 1665 aa26.31■■□□□ 1.8
EXOSC3-203ENST00000465229 PPARGC1BQ86YN6 1023 aaKnown RBP26.3■■□□□ 1.8
EXOSC3-203ENST00000465229 MAGI3Q5TCQ9 1506 aa26.3■■□□□ 1.8
EXOSC3-203ENST00000465229 ASXL2Q76L83 1435 aa26.3■■□□□ 1.8
EXOSC3-203ENST00000465229 LRRC9Q6ZRR7 1453 aa26.29■■□□□ 1.8
EXOSC3-203ENST00000465229 MTUS2Q5JR59 1369 aa26.29■■□□□ 1.8
EXOSC3-203ENST00000465229 TROQ12816 1431 aaPredicted RBP26.26■■□□□ 1.79
EXOSC3-203ENST00000465229 MAPKBP1O60336 1514 aa26.25■■□□□ 1.79
EXOSC3-203ENST00000465229 WDR7Q9Y4E6 1490 aa26.24■■□□□ 1.79
EXOSC3-203ENST00000465229 KCNH8Q96L42 1107 aa26.24■■□□□ 1.79
EXOSC3-203ENST00000465229 EHBP1L1Q8N3D4 1523 aa26.19■■□□□ 1.78
EXOSC3-203ENST00000465229 KIF14Q15058 1648 aa26.11■■□□□ 1.77
EXOSC3-203ENST00000465229 NCOA2Q15596 1464 aa26.11■■□□□ 1.77
EXOSC3-203ENST00000465229 ABCC10Q5T3U5 1492 aa26.08■■□□□ 1.77
EXOSC3-203ENST00000465229 SUPT6HQ7KZ85 1726 aaKnown RBP26.07■■□□□ 1.76
EXOSC3-203ENST00000465229 FAM69CQ0P6D2 419 aa26.06■■□□□ 1.76
EXOSC3-203ENST00000465229 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.06■■□□□ 1.76
EXOSC3-203ENST00000465229 TRIM26Q12899 539 aaPredicted RBP26.06■■□□□ 1.76
EXOSC3-203ENST00000465229 PCGF6Q9BYE7 350 aa26.05■■□□□ 1.76
EXOSC3-203ENST00000465229 PHLDB1Q86UU1 1377 aa26.03■■□□□ 1.76
EXOSC3-203ENST00000465229 CCNB3Q8WWL7 1395 aa26.02■■□□□ 1.76
EXOSC3-203ENST00000465229 DIP2BQ9P265 1576 aa26.01■■□□□ 1.75
EXOSC3-203ENST00000465229 TTC37Q6PGP7 1564 aa26■■□□□ 1.75
EXOSC3-203ENST00000465229 GLI2P10070 1586 aa26■■□□□ 1.75
EXOSC3-203ENST00000465229 ABCA9Q8IUA7 1624 aa25.99■■□□□ 1.75
EXOSC3-203ENST00000465229 GPATCH8Q9UKJ3 1502 aaKnown RBP25.99■■□□□ 1.75
EXOSC3-203ENST00000465229 CD109Q6YHK3 1445 aa25.97■■□□□ 1.75
EXOSC3-203ENST00000465229 MYOM3Q5VTT5 1437 aa25.95■■□□□ 1.75
EXOSC3-203ENST00000465229 PLCH2O75038 1416 aa25.95■■□□□ 1.74
EXOSC3-203ENST00000465229 TRHP20396 242 aaPredicted RBP25.94■■□□□ 1.74
EXOSC3-203ENST00000465229 CFDP1Q9UEE9 299 aaPredicted RBP25.93■■□□□ 1.74
EXOSC3-203ENST00000465229 KIF13AQ9H1H9 1805 aa25.9■■□□□ 1.74
EXOSC3-203ENST00000465229 CDC42BPAQ5VT25 1732 aa25.89■■□□□ 1.74
EXOSC3-203ENST00000465229 MAP3K4Q9Y6R4 1608 aa25.89■■□□□ 1.73
EXOSC3-203ENST00000465229 FGD6Q6ZV73 1430 aa25.88■■□□□ 1.73
EXOSC3-203ENST00000465229 EFCAB2Q5VUJ9 269 aa25.88■■□□□ 1.73
EXOSC3-203ENST00000465229 MIA2Q96PC5 1412 aa25.88■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms