RNA–Protein interactions for RNA: ENST00000465209.1

COL11A1-207, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 297 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-207ENST00000465209 CUL7Q14999 1698 aa19.49■□□□□ 0.71
COL11A1-207ENST00000465209 ADCY10Q96PN6 1610 aa19.49■□□□□ 0.71
COL11A1-207ENST00000465209 MAPKBP1O60336 1514 aa19.47■□□□□ 0.71
COL11A1-207ENST00000465209 KIAA0586Q9BVV6 1533 aa19.46■□□□□ 0.71
COL11A1-207ENST00000465209 IGF1RP08069 1367 aa19.46■□□□□ 0.71
COL11A1-207ENST00000465209 ABCC10Q5T3U5 1492 aa19.44■□□□□ 0.7
COL11A1-207ENST00000465209 DIP2BQ9P265 1576 aa19.44■□□□□ 0.7
COL11A1-207ENST00000465209 KIF27Q86VH2 1401 aa19.43■□□□□ 0.7
COL11A1-207ENST00000465209 AEBP2Q6ZN18 517 aaPredicted RBP19.37■□□□□ 0.69
COL11A1-207ENST00000465209 FAM69CQ0P6D2 419 aa19.31■□□□□ 0.68
COL11A1-207ENST00000465209 CARMIL1Q5VZK9 1371 aa19.31■□□□□ 0.68
COL11A1-207ENST00000465209 IQGAP2Q13576 1575 aa19.28■□□□□ 0.68
COL11A1-207ENST00000465209 NPM1P06748 294 aaKnown RBP eCLIP19.26■□□□□ 0.67
COL11A1-207ENST00000465209 TSPOAP1O95153 1857 aa19.25■□□□□ 0.67
COL11A1-207ENST00000465209 KDM6BO15054 1643 aa19.24■□□□□ 0.67
COL11A1-207ENST00000465209 PTPRGP23470 1445 aa19.24■□□□□ 0.67
COL11A1-207ENST00000465209 ABCC2Q92887 1545 aa19.23■□□□□ 0.67
COL11A1-207ENST00000465209 DISP1Q96F81 1524 aa19.23■□□□□ 0.67
COL11A1-207ENST00000465209 TNIKQ9UKE5 1360 aa19.22■□□□□ 0.67
COL11A1-207ENST00000465209 PPRC1Q5VV67 1664 aaKnown RBP19.22■□□□□ 0.67
COL11A1-207ENST00000465209 UHRF1BP1LA0JNW5 1464 aa19.21■□□□□ 0.67
COL11A1-207ENST00000465209 CARMIL2Q6F5E8 1435 aa19.19■□□□□ 0.66
COL11A1-207ENST00000465209 GLI2P10070 1586 aa19.18■□□□□ 0.66
COL11A1-207ENST00000465209 UGGT2Q9NYU1 1516 aa19.17■□□□□ 0.66
COL11A1-207ENST00000465209 ASXL2Q76L83 1435 aa19.16■□□□□ 0.66
COL11A1-207ENST00000465209 RAPGEF2Q9Y4G8 1499 aa19.14■□□□□ 0.65
COL11A1-207ENST00000465209 KIAA0556O60303 1618 aa19.14■□□□□ 0.65
COL11A1-207ENST00000465209 UACAQ9BZF9 1416 aa19.13■□□□□ 0.65
COL11A1-207ENST00000465209 PLB1Q6P1J6 1458 aa19.13■□□□□ 0.65
COL11A1-207ENST00000465209 KDM5BQ9UGL1 1544 aa19.12■□□□□ 0.65
COL11A1-207ENST00000465209 ZCCHC11Q5TAX3 1644 aaKnown RBP19.1■□□□□ 0.65
COL11A1-207ENST00000465209 MAP3K4Q9Y6R4 1608 aa19.1■□□□□ 0.65
COL11A1-207ENST00000465209 TTBK1Q5TCY1 1321 aaPredicted RBP19.08■□□□□ 0.65
COL11A1-207ENST00000465209 KDM4FA0A1W2PPD8 638 aa19.08■□□□□ 0.64
COL11A1-207ENST00000465209 CTTNBP2Q8WZ74 1663 aa19.08■□□□□ 0.64
COL11A1-207ENST00000465209 EPRSP07814 1512 aaKnown RBP19.06■□□□□ 0.64
COL11A1-207ENST00000465209 COL17A1Q9UMD9 1497 aaPredicted RBP19.03■□□□□ 0.64
COL11A1-207ENST00000465209 ABCA8O94911 1581 aa18.98■□□□□ 0.63
COL11A1-207ENST00000465209 PRXQ9BXM0 1461 aa18.97■□□□□ 0.63
COL11A1-207ENST00000465209 WDR7Q9Y4E6 1490 aa18.97■□□□□ 0.63
COL11A1-207ENST00000465209 TEX14Q8IWB6 1497 aa18.94■□□□□ 0.62
COL11A1-207ENST00000465209 ADGRL1O94910 1474 aa18.92■□□□□ 0.62
COL11A1-207ENST00000465209 GOLGA3Q08378 1498 aa18.92■□□□□ 0.62
COL11A1-207ENST00000465209 CFAP43Q8NDM7 1665 aa18.91■□□□□ 0.62
COL11A1-207ENST00000465209 MAGI3Q5TCQ9 1506 aa18.87■□□□□ 0.61
COL11A1-207ENST00000465209 SAMD9Q5K651 1589 aa18.81■□□□□ 0.6
COL11A1-207ENST00000465209 CD109Q6YHK3 1445 aa18.81■□□□□ 0.6
COL11A1-207ENST00000465209 ATP10BO94823 1461 aa18.76■□□□□ 0.59
COL11A1-207ENST00000465209 ABCA9Q8IUA7 1624 aa18.74■□□□□ 0.59
COL11A1-207ENST00000465209 HECW2Q9P2P5 1572 aa18.73■□□□□ 0.59
COL11A1-207ENST00000465209 KIF21BO75037 1637 aa18.73■□□□□ 0.59
COL11A1-207ENST00000465209 ARAP3Q8WWN8 1544 aa18.73■□□□□ 0.59
COL11A1-207ENST00000465209 RAPGEF6Q8TEU7 1601 aa18.72■□□□□ 0.59
COL11A1-207ENST00000465209 KCNH8Q96L42 1107 aa18.71■□□□□ 0.59
COL11A1-207ENST00000465209 P3H3Q8IVL6 736 aa18.66■□□□□ 0.58
COL11A1-207ENST00000465209 NUP153P49790 1475 aaKnown RBP18.65■□□□□ 0.58
COL11A1-207ENST00000465209 CSRNP3Q8WYN3 585 aa18.65■□□□□ 0.58
COL11A1-207ENST00000465209 FRMPD1Q5SYB0 1578 aa18.64■□□□□ 0.58
COL11A1-207ENST00000465209 ARID3CA6NKF2 412 aa18.63■□□□□ 0.57
COL11A1-207ENST00000465209 EEA1Q15075 1411 aa18.62■□□□□ 0.57
COL11A1-207ENST00000465209 NEO1Q92859 1461 aa18.61■□□□□ 0.57
COL11A1-207ENST00000465209 ADAMTSL3P82987 1691 aa18.6■□□□□ 0.57
COL11A1-207ENST00000465209 PHLDB1Q86UU1 1377 aa18.6■□□□□ 0.57
COL11A1-207ENST00000465209 FHOD3Q2V2M9 1422 aa18.59■□□□□ 0.57
COL11A1-207ENST00000465209 ILDR1Q86SU0 546 aaPredicted RBP18.57■□□□□ 0.56
COL11A1-207ENST00000465209 BCORL1Q5H9F3 1711 aa18.54■□□□□ 0.56
COL11A1-207ENST00000465209 RICTORQ6R327 1708 aa18.54■□□□□ 0.56
COL11A1-207ENST00000465209 EFCAB5A4FU69 1503 aa18.54■□□□□ 0.56
COL11A1-207ENST00000465209 RAPGEF3O95398 923 aa18.52■□□□□ 0.56
COL11A1-207ENST00000465209 ARHGEF40Q8TER5 1519 aa18.52■□□□□ 0.56
COL11A1-207ENST00000465209 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.51■□□□□ 0.55
COL11A1-207ENST00000465209 FAM9AQ8IZU1 332 aaPredicted RBP18.51■□□□□ 0.55
COL11A1-207ENST00000465209 PTPRMP28827 1452 aa18.51■□□□□ 0.55
COL11A1-207ENST00000465209 TTC37Q6PGP7 1564 aa18.51■□□□□ 0.55
COL11A1-207ENST00000465209 MADDQ8WXG6 1647 aa18.49■□□□□ 0.55
COL11A1-207ENST00000465209 CFAP74Q9C0B2 1584 aa18.48■□□□□ 0.55
COL11A1-207ENST00000465209 SIGLEC1Q9BZZ2 1709 aa18.47■□□□□ 0.55
COL11A1-207ENST00000465209 ZMYM4Q5VZL5 1548 aa18.46■□□□□ 0.55
COL11A1-207ENST00000465209 CDK13Q14004 1512 aaKnown RBP18.44■□□□□ 0.54
COL11A1-207ENST00000465209 AKNAQ7Z591 1439 aa18.44■□□□□ 0.54
COL11A1-207ENST00000465209 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.44■□□□□ 0.54
COL11A1-207ENST00000465209 HNRNPUL2Q1KMD3 747 aaKnown RBP18.44■□□□□ 0.54
COL11A1-207ENST00000465209 FANCAO15360 1455 aa18.44■□□□□ 0.54
COL11A1-207ENST00000465209 DENND4BO75064 1496 aaPredicted RBP18.44■□□□□ 0.54
COL11A1-207ENST00000465209 RANGAP1P46060 587 aaPredicted RBP18.43■□□□□ 0.54
COL11A1-207ENST00000465209 RIMS1Q86UR5 1692 aaKnown RBP18.41■□□□□ 0.54
COL11A1-207ENST00000465209 PLEKHD1A6NEE1 506 aa18.4■□□□□ 0.54
COL11A1-207ENST00000465209 PCF11O94913 1555 aaKnown RBP18.39■□□□□ 0.53
COL11A1-207ENST00000465209 LMTK3Q96Q04 1460 aa18.39■□□□□ 0.53
COL11A1-207ENST00000465209 YEATS2Q9ULM3 1422 aa18.37■□□□□ 0.53
COL11A1-207ENST00000465209 ARHGAP35Q9NRY4 1499 aa18.37■□□□□ 0.53
COL11A1-207ENST00000465209 ZFYVE16Q7Z3T8 1539 aa18.37■□□□□ 0.53
COL11A1-207ENST00000465209 HECW1Q76N89 1606 aa18.37■□□□□ 0.53
COL11A1-207ENST00000465209 LRRIQ1Q96JM4 1722 aa18.35■□□□□ 0.53
COL11A1-207ENST00000465209 MAGI2Q86UL8 1455 aa18.34■□□□□ 0.53
COL11A1-207ENST00000465209 PLCH2O75038 1416 aa18.34■□□□□ 0.53
COL11A1-207ENST00000465209 POGZQ7Z3K3 1410 aa18.34■□□□□ 0.53
COL11A1-207ENST00000465209 MYO5CQ9NQX4 1742 aa18.34■□□□□ 0.53
COL11A1-207ENST00000465209 KIF14Q15058 1648 aa18.33■□□□□ 0.52
COL11A1-207ENST00000465209 FMN1Q68DA7 1419 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms