RNA–Protein interactions for RNA: ENST00000465135.1

C1orf56-202, Transcript of chromosome 1 open reading frame 56, humanhuman

TSL 3

Gene C1orf56, Length 433 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf56-202ENST00000465135 CARMIL1Q5VZK9 1371 aa18.05■□□□□ 0.48
C1orf56-202ENST00000465135 SHROOM2Q13796 1616 aa18.04■□□□□ 0.48
C1orf56-202ENST00000465135 JPH4Q96JJ6 628 aa17.97■□□□□ 0.47
C1orf56-202ENST00000465135 PRG4Q92954 1404 aaPredicted RBP17.97■□□□□ 0.47
C1orf56-202ENST00000465135 KIAA0586Q9BVV6 1533 aa17.95■□□□□ 0.46
C1orf56-202ENST00000465135 RAPGEF2Q9Y4G8 1499 aa17.94■□□□□ 0.46
C1orf56-202ENST00000465135 IQGAP2Q13576 1575 aa17.87■□□□□ 0.45
C1orf56-202ENST00000465135 PRXQ9BXM0 1461 aa17.86■□□□□ 0.45
C1orf56-202ENST00000465135 FAM9AQ8IZU1 332 aaPredicted RBP17.84■□□□□ 0.45
C1orf56-202ENST00000465135 CTTNBP2Q8WZ74 1663 aa17.81■□□□□ 0.44
C1orf56-202ENST00000465135 CSRNP3Q8WYN3 585 aa17.81■□□□□ 0.44
C1orf56-202ENST00000465135 TTBK1Q5TCY1 1321 aaPredicted RBP17.8■□□□□ 0.44
C1orf56-202ENST00000465135 TRHP20396 242 aaPredicted RBP17.79■□□□□ 0.44
C1orf56-202ENST00000465135 DISP1Q96F81 1524 aa17.77■□□□□ 0.43
C1orf56-202ENST00000465135 EEA1Q15075 1411 aa17.76■□□□□ 0.43
C1orf56-202ENST00000465135 CARMIL2Q6F5E8 1435 aa17.74■□□□□ 0.43
C1orf56-202ENST00000465135 UGGT2Q9NYU1 1516 aa17.74■□□□□ 0.43
C1orf56-202ENST00000465135 ADCY10Q96PN6 1610 aa17.74■□□□□ 0.43
C1orf56-202ENST00000465135 KIAA0556O60303 1618 aa17.72■□□□□ 0.43
C1orf56-202ENST00000465135 PTPRGP23470 1445 aa17.72■□□□□ 0.43
C1orf56-202ENST00000465135 TNIKQ9UKE5 1360 aa17.71■□□□□ 0.43
C1orf56-202ENST00000465135 EHMT2Q96KQ7 1210 aa17.69■□□□□ 0.42
C1orf56-202ENST00000465135 KIF21BO75037 1637 aa17.65■□□□□ 0.42
C1orf56-202ENST00000465135 RANGAP1P46060 587 aaPredicted RBP17.63■□□□□ 0.41
C1orf56-202ENST00000465135 NPM1P06748 294 aaKnown RBP eCLIP17.61■□□□□ 0.41
C1orf56-202ENST00000465135 P3H3Q8IVL6 736 aa17.61■□□□□ 0.41
C1orf56-202ENST00000465135 GOLGA3Q08378 1498 aa17.61■□□□□ 0.41
C1orf56-202ENST00000465135 UACAQ9BZF9 1416 aa17.6■□□□□ 0.41
C1orf56-202ENST00000465135 KIF13AQ9H1H9 1805 aa17.6■□□□□ 0.41
C1orf56-202ENST00000465135 MAPKBP1O60336 1514 aa17.57■□□□□ 0.4
C1orf56-202ENST00000465135 ABCC2Q92887 1545 aa17.57■□□□□ 0.4
C1orf56-202ENST00000465135 PLB1Q6P1J6 1458 aa17.56■□□□□ 0.4
C1orf56-202ENST00000465135 SAMD9Q5K651 1589 aa17.56■□□□□ 0.4
C1orf56-202ENST00000465135 UHRF1BP1LA0JNW5 1464 aa17.56■□□□□ 0.4
C1orf56-202ENST00000465135 DIP2BQ9P265 1576 aa17.53■□□□□ 0.4
C1orf56-202ENST00000465135 ABCC10Q5T3U5 1492 aa17.52■□□□□ 0.4
C1orf56-202ENST00000465135 ZCCHC11Q5TAX3 1644 aaKnown RBP17.52■□□□□ 0.4
C1orf56-202ENST00000465135 UBTFP17480 764 aaKnown RBP17.52■□□□□ 0.4
C1orf56-202ENST00000465135 ABCA8O94911 1581 aa17.52■□□□□ 0.39
C1orf56-202ENST00000465135 FAM69CQ0P6D2 419 aa17.51■□□□□ 0.39
C1orf56-202ENST00000465135 FHOD3Q2V2M9 1422 aa17.5■□□□□ 0.39
C1orf56-202ENST00000465135 ASXL2Q76L83 1435 aa17.5■□□□□ 0.39
C1orf56-202ENST00000465135 KDM5BQ9UGL1 1544 aa17.5■□□□□ 0.39
C1orf56-202ENST00000465135 ARID3CA6NKF2 412 aa17.47■□□□□ 0.39
C1orf56-202ENST00000465135 TSPOAP1O95153 1857 aa17.46■□□□□ 0.38
C1orf56-202ENST00000465135 EFCAB5A4FU69 1503 aa17.42■□□□□ 0.38
C1orf56-202ENST00000465135 RAPGEF6Q8TEU7 1601 aa17.42■□□□□ 0.38
C1orf56-202ENST00000465135 EPRSP07814 1512 aaKnown RBP17.38■□□□□ 0.37
C1orf56-202ENST00000465135 ARHGAP35Q9NRY4 1499 aa17.37■□□□□ 0.37
C1orf56-202ENST00000465135 WDR7Q9Y4E6 1490 aa17.37■□□□□ 0.37
C1orf56-202ENST00000465135 ATP10BO94823 1461 aa17.37■□□□□ 0.37
C1orf56-202ENST00000465135 NUP153P49790 1475 aaKnown RBP17.36■□□□□ 0.37
C1orf56-202ENST00000465135 GLI2P10070 1586 aa17.36■□□□□ 0.37
C1orf56-202ENST00000465135 PPRC1Q5VV67 1664 aaKnown RBP17.35■□□□□ 0.37
C1orf56-202ENST00000465135 KCNH8Q96L42 1107 aa17.33■□□□□ 0.36
C1orf56-202ENST00000465135 MAP3K4Q9Y6R4 1608 aa17.32■□□□□ 0.36
C1orf56-202ENST00000465135 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.31■□□□□ 0.36
C1orf56-202ENST00000465135 HNRNPUL2Q1KMD3 747 aaKnown RBP17.31■□□□□ 0.36
C1orf56-202ENST00000465135 CDK13Q14004 1512 aaKnown RBP17.27■□□□□ 0.36
C1orf56-202ENST00000465135 KDM6BO15054 1643 aa17.26■□□□□ 0.35
C1orf56-202ENST00000465135 ATP1B4Q9UN42 357 aaPredicted RBP17.26■□□□□ 0.35
C1orf56-202ENST00000465135 FMN1Q68DA7 1419 aa17.25■□□□□ 0.35
C1orf56-202ENST00000465135 CFAP43Q8NDM7 1665 aa17.24■□□□□ 0.35
C1orf56-202ENST00000465135 CLIP1P30622 1438 aa17.23■□□□□ 0.35
C1orf56-202ENST00000465135 HECW1Q76N89 1606 aa17.23■□□□□ 0.35
C1orf56-202ENST00000465135 CD109Q6YHK3 1445 aa17.22■□□□□ 0.35
C1orf56-202ENST00000465135 LRRIQ1Q96JM4 1722 aa17.21■□□□□ 0.35
C1orf56-202ENST00000465135 LOC105371045A0A1W2PR82 267 aa17.21■□□□□ 0.35
C1orf56-202ENST00000465135 PCF11O94913 1555 aaKnown RBP17.2■□□□□ 0.34
C1orf56-202ENST00000465135 TEX14Q8IWB6 1497 aa17.19■□□□□ 0.34
C1orf56-202ENST00000465135 ABCA9Q8IUA7 1624 aa17.19■□□□□ 0.34
C1orf56-202ENST00000465135 COL17A1Q9UMD9 1497 aaPredicted RBP17.18■□□□□ 0.34
C1orf56-202ENST00000465135 PLEKHD1A6NEE1 506 aa17.17■□□□□ 0.34
C1orf56-202ENST00000465135 SENP3Q9H4L4 574 aaPredicted RBP17.17■□□□□ 0.34
C1orf56-202ENST00000465135 MAGI3Q5TCQ9 1506 aa17.16■□□□□ 0.34
C1orf56-202ENST00000465135 CEP162Q5TB80 1403 aa17.15■□□□□ 0.34
C1orf56-202ENST00000465135 CASKIN1Q8WXD9 1431 aa17.13■□□□□ 0.33
C1orf56-202ENST00000465135 TTC37Q6PGP7 1564 aa17.13■□□□□ 0.33
C1orf56-202ENST00000465135 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.12■□□□□ 0.33
C1orf56-202ENST00000465135 FYCO1Q9BQS8 1478 aa17.1■□□□□ 0.33
C1orf56-202ENST00000465135 KIF14Q15058 1648 aa17.1■□□□□ 0.33
C1orf56-202ENST00000465135 CCDC18Q5T9S5 1454 aa17.05■□□□□ 0.32
C1orf56-202ENST00000465135 TROQ12816 1431 aaPredicted RBP17.05■□□□□ 0.32
C1orf56-202ENST00000465135 CDK11AQ9UQ88 783 aaPredicted RBP17.04■□□□□ 0.32
C1orf56-202ENST00000465135 NEO1Q92859 1461 aa17.02■□□□□ 0.32
C1orf56-202ENST00000465135 ARAP3Q8WWN8 1544 aa17.01■□□□□ 0.31
C1orf56-202ENST00000465135 FANCAO15360 1455 aa17.01■□□□□ 0.31
C1orf56-202ENST00000465135 MYO5CQ9NQX4 1742 aa17.01■□□□□ 0.31
C1orf56-202ENST00000465135 RAPGEF3O95398 923 aa17■□□□□ 0.31
C1orf56-202ENST00000465135 FRMPD1Q5SYB0 1578 aa16.98■□□□□ 0.31
C1orf56-202ENST00000465135 AKNAQ7Z591 1439 aa16.98■□□□□ 0.31
C1orf56-202ENST00000465135 CFAP74Q9C0B2 1584 aa16.98■□□□□ 0.31
C1orf56-202ENST00000465135 PLCH2O75038 1416 aa16.97■□□□□ 0.31
C1orf56-202ENST00000465135 PHLDB1Q86UU1 1377 aa16.96■□□□□ 0.31
C1orf56-202ENST00000465135 RICTORQ6R327 1708 aa16.94■□□□□ 0.3
C1orf56-202ENST00000465135 CDC42BPBQ9Y5S2 1711 aa16.94■□□□□ 0.3
C1orf56-202ENST00000465135 ARHGAP5Q13017 1502 aa16.94■□□□□ 0.3
C1orf56-202ENST00000465135 VPS8Q8N3P4 1428 aa16.93■□□□□ 0.3
C1orf56-202ENST00000465135 DENND4BO75064 1496 aaPredicted RBP16.93■□□□□ 0.3
C1orf56-202ENST00000465135 ADGRL1O94910 1474 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms