RNA–Protein interactions for RNA: ENST00000465085.2

ABCD4-203, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 1,123 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-203ENST00000465085 AEBP2Q6ZN18 517 aaPredicted RBP22.24■■□□□ 1.15
ABCD4-203ENST00000465085 CUL7Q14999 1698 aa22.23■■□□□ 1.15
ABCD4-203ENST00000465085 MAPKBP1O60336 1514 aa22.19■■□□□ 1.14
ABCD4-203ENST00000465085 KIAA0586Q9BVV6 1533 aa22.19■■□□□ 1.14
ABCD4-203ENST00000465085 ADCY10Q96PN6 1610 aa22.18■■□□□ 1.14
ABCD4-203ENST00000465085 KIF27Q86VH2 1401 aa22.18■■□□□ 1.14
ABCD4-203ENST00000465085 IGF1RP08069 1367 aa22.17■■□□□ 1.14
ABCD4-203ENST00000465085 ABCC10Q5T3U5 1492 aa22.15■■□□□ 1.14
ABCD4-203ENST00000465085 DIP2BQ9P265 1576 aa22.13■■□□□ 1.13
ABCD4-203ENST00000465085 NPM1P06748 294 aaKnown RBP eCLIP22.1■■□□□ 1.13
ABCD4-203ENST00000465085 FAM69CQ0P6D2 419 aa22.06■■□□□ 1.12
ABCD4-203ENST00000465085 CARMIL1Q5VZK9 1371 aa22.01■■□□□ 1.11
ABCD4-203ENST00000465085 IQGAP2Q13576 1575 aa21.98■■□□□ 1.11
ABCD4-203ENST00000465085 PTPRGP23470 1445 aa21.97■■□□□ 1.11
ABCD4-203ENST00000465085 TSPOAP1O95153 1857 aa21.97■■□□□ 1.11
ABCD4-203ENST00000465085 KDM6BO15054 1643 aa21.96■■□□□ 1.11
ABCD4-203ENST00000465085 CARMIL2Q6F5E8 1435 aa21.96■■□□□ 1.11
ABCD4-203ENST00000465085 TNIKQ9UKE5 1360 aa21.93■■□□□ 1.1
ABCD4-203ENST00000465085 ABCC2Q92887 1545 aa21.92■■□□□ 1.1
ABCD4-203ENST00000465085 UHRF1BP1LA0JNW5 1464 aa21.88■■□□□ 1.09
ABCD4-203ENST00000465085 DISP1Q96F81 1524 aa21.86■■□□□ 1.09
ABCD4-203ENST00000465085 GLI2P10070 1586 aa21.85■■□□□ 1.09
ABCD4-203ENST00000465085 PLB1Q6P1J6 1458 aa21.84■■□□□ 1.09
ABCD4-203ENST00000465085 ASXL2Q76L83 1435 aa21.84■■□□□ 1.09
ABCD4-203ENST00000465085 PPRC1Q5VV67 1664 aaKnown RBP21.84■■□□□ 1.09
ABCD4-203ENST00000465085 UGGT2Q9NYU1 1516 aa21.83■■□□□ 1.09
ABCD4-203ENST00000465085 RAPGEF2Q9Y4G8 1499 aa21.83■■□□□ 1.08
ABCD4-203ENST00000465085 TTBK1Q5TCY1 1321 aaPredicted RBP21.82■■□□□ 1.08
ABCD4-203ENST00000465085 UACAQ9BZF9 1416 aa21.82■■□□□ 1.08
ABCD4-203ENST00000465085 KIAA0556O60303 1618 aa21.79■■□□□ 1.08
ABCD4-203ENST00000465085 KDM5BQ9UGL1 1544 aa21.78■■□□□ 1.08
ABCD4-203ENST00000465085 ZCCHC11Q5TAX3 1644 aaKnown RBP21.75■■□□□ 1.07
ABCD4-203ENST00000465085 CTTNBP2Q8WZ74 1663 aa21.75■■□□□ 1.07
ABCD4-203ENST00000465085 MAP3K4Q9Y6R4 1608 aa21.74■■□□□ 1.07
ABCD4-203ENST00000465085 KDM4FA0A1W2PPD8 638 aa21.73■■□□□ 1.07
ABCD4-203ENST00000465085 EPRSP07814 1512 aaKnown RBP21.72■■□□□ 1.07
ABCD4-203ENST00000465085 TEX14Q8IWB6 1497 aa21.65■■□□□ 1.06
ABCD4-203ENST00000465085 GOLGA3Q08378 1498 aa21.63■■□□□ 1.05
ABCD4-203ENST00000465085 COL17A1Q9UMD9 1497 aaPredicted RBP21.62■■□□□ 1.05
ABCD4-203ENST00000465085 WDR7Q9Y4E6 1490 aa21.62■■□□□ 1.05
ABCD4-203ENST00000465085 ABCA8O94911 1581 aa21.59■■□□□ 1.05
ABCD4-203ENST00000465085 PRXQ9BXM0 1461 aa21.58■■□□□ 1.05
ABCD4-203ENST00000465085 ADGRL1O94910 1474 aa21.58■■□□□ 1.04
ABCD4-203ENST00000465085 CFAP43Q8NDM7 1665 aa21.56■■□□□ 1.04
ABCD4-203ENST00000465085 MAGI3Q5TCQ9 1506 aa21.51■■□□□ 1.03
ABCD4-203ENST00000465085 CD109Q6YHK3 1445 aa21.47■■□□□ 1.03
ABCD4-203ENST00000465085 SAMD9Q5K651 1589 aa21.4■■□□□ 1.02
ABCD4-203ENST00000465085 KCNH8Q96L42 1107 aa21.4■■□□□ 1.02
ABCD4-203ENST00000465085 ATP10BO94823 1461 aa21.37■■□□□ 1.01
ABCD4-203ENST00000465085 ABCA9Q8IUA7 1624 aa21.36■■□□□ 1.01
ABCD4-203ENST00000465085 ARAP3Q8WWN8 1544 aa21.35■■□□□ 1.01
ABCD4-203ENST00000465085 FAM9AQ8IZU1 332 aaPredicted RBP21.35■■□□□ 1.01
ABCD4-203ENST00000465085 HECW2Q9P2P5 1572 aa21.35■■□□□ 1.01
ABCD4-203ENST00000465085 KIF21BO75037 1637 aa21.33■■□□□ 1.01
ABCD4-203ENST00000465085 RAPGEF6Q8TEU7 1601 aa21.33■■□□□ 1.01
ABCD4-203ENST00000465085 P3H3Q8IVL6 736 aa21.3■■□□□ 1
ABCD4-203ENST00000465085 CSRNP3Q8WYN3 585 aa21.3■■□□□ 1
ABCD4-203ENST00000465085 ARID3CA6NKF2 412 aa21.28■■□□□ 1
ABCD4-203ENST00000465085 PHLDB1Q86UU1 1377 aa21.27■■□□□ 1
ABCD4-203ENST00000465085 EEA1Q15075 1411 aa21.26■□□□□ 0.99
ABCD4-203ENST00000465085 NUP153P49790 1475 aaKnown RBP21.23■□□□□ 0.99
ABCD4-203ENST00000465085 NEO1Q92859 1461 aa21.23■□□□□ 0.99
ABCD4-203ENST00000465085 ILDR1Q86SU0 546 aaPredicted RBP21.2■□□□□ 0.98
ABCD4-203ENST00000465085 FRMPD1Q5SYB0 1578 aa21.19■□□□□ 0.98
ABCD4-203ENST00000465085 ADAMTSL3P82987 1691 aa21.18■□□□□ 0.98
ABCD4-203ENST00000465085 FHOD3Q2V2M9 1422 aa21.17■□□□□ 0.98
ABCD4-203ENST00000465085 EFCAB5A4FU69 1503 aa21.15■□□□□ 0.98
ABCD4-203ENST00000465085 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.14■□□□□ 0.97
ABCD4-203ENST00000465085 HNRNPUL2Q1KMD3 747 aaKnown RBP21.14■□□□□ 0.97
ABCD4-203ENST00000465085 RAPGEF3O95398 923 aa21.13■□□□□ 0.97
ABCD4-203ENST00000465085 BCORL1Q5H9F3 1711 aa21.12■□□□□ 0.97
ABCD4-203ENST00000465085 RICTORQ6R327 1708 aa21.11■□□□□ 0.97
ABCD4-203ENST00000465085 CFAP74Q9C0B2 1584 aa21.1■□□□□ 0.97
ABCD4-203ENST00000465085 PTPRMP28827 1452 aa21.1■□□□□ 0.97
ABCD4-203ENST00000465085 ARHGEF40Q8TER5 1519 aa21.09■□□□□ 0.97
ABCD4-203ENST00000465085 RANGAP1P46060 587 aaPredicted RBP21.08■□□□□ 0.97
ABCD4-203ENST00000465085 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.07■□□□□ 0.96
ABCD4-203ENST00000465085 MADDQ8WXG6 1647 aa21.07■□□□□ 0.96
ABCD4-203ENST00000465085 TTC37Q6PGP7 1564 aa21.06■□□□□ 0.96
ABCD4-203ENST00000465085 PLEKHD1A6NEE1 506 aa21.06■□□□□ 0.96
ABCD4-203ENST00000465085 FANCAO15360 1455 aa21.05■□□□□ 0.96
ABCD4-203ENST00000465085 DENND4BO75064 1496 aaPredicted RBP21.05■□□□□ 0.96
ABCD4-203ENST00000465085 AKNAQ7Z591 1439 aa21.04■□□□□ 0.96
ABCD4-203ENST00000465085 ZMYM4Q5VZL5 1548 aa21.03■□□□□ 0.96
ABCD4-203ENST00000465085 CDK13Q14004 1512 aaKnown RBP20.99■□□□□ 0.95
ABCD4-203ENST00000465085 RIMS1Q86UR5 1692 aaKnown RBP20.99■□□□□ 0.95
ABCD4-203ENST00000465085 ARID4BQ4LE39 1312 aaPredicted RBP20.98■□□□□ 0.95
ABCD4-203ENST00000465085 PCF11O94913 1555 aaKnown RBP20.97■□□□□ 0.95
ABCD4-203ENST00000465085 ZFYVE16Q7Z3T8 1539 aa20.95■□□□□ 0.94
ABCD4-203ENST00000465085 HECW1Q76N89 1606 aa20.95■□□□□ 0.94
ABCD4-203ENST00000465085 MAGI2Q86UL8 1455 aa20.94■□□□□ 0.94
ABCD4-203ENST00000465085 SIGLEC1Q9BZZ2 1709 aa20.94■□□□□ 0.94
ABCD4-203ENST00000465085 LMTK3Q96Q04 1460 aa20.94■□□□□ 0.94
ABCD4-203ENST00000465085 FMN1Q68DA7 1419 aa20.93■□□□□ 0.94
ABCD4-203ENST00000465085 MYO5CQ9NQX4 1742 aa20.92■□□□□ 0.94
ABCD4-203ENST00000465085 PLCH2O75038 1416 aa20.91■□□□□ 0.94
ABCD4-203ENST00000465085 POGZQ7Z3K3 1410 aa20.91■□□□□ 0.94
ABCD4-203ENST00000465085 YEATS2Q9ULM3 1422 aa20.9■□□□□ 0.94
ABCD4-203ENST00000465085 ARHGAP35Q9NRY4 1499 aa20.89■□□□□ 0.94
ABCD4-203ENST00000465085 FER1L4A9Z1Z3 1794 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 212.9 ms