RNA–Protein interactions for RNA: ENST00000464812.1

NUDCD3-204, Transcript of NudC domain containing 3, humanhuman

TSL 5

Gene NUDCD3, Length 811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-204ENST00000464812 CUL7Q14999 1698 aa14.97□□□□□ -0.01
NUDCD3-204ENST00000464812 ERCC6L2Q5T890 1561 aa14.96□□□□□ -0.01
NUDCD3-204ENST00000464812 FAM9AQ8IZU1 332 aaPredicted RBP14.95□□□□□ -0.02
NUDCD3-204ENST00000464812 ARAP1Q96P48 1450 aa14.95□□□□□ -0.02
NUDCD3-204ENST00000464812 KIF21BO75037 1637 aa14.92□□□□□ -0.02
NUDCD3-204ENST00000464812 SHROOM2Q13796 1616 aa14.91□□□□□ -0.02
NUDCD3-204ENST00000464812 PRXQ9BXM0 1461 aa14.89□□□□□ -0.03
NUDCD3-204ENST00000464812 CSRNP3Q8WYN3 585 aa14.87□□□□□ -0.03
NUDCD3-204ENST00000464812 RAPGEF2Q9Y4G8 1499 aa14.86□□□□□ -0.03
NUDCD3-204ENST00000464812 CARMIL1Q5VZK9 1371 aa14.85□□□□□ -0.03
NUDCD3-204ENST00000464812 CTTNBP2Q8WZ74 1663 aa14.81□□□□□ -0.04
NUDCD3-204ENST00000464812 CYB5RLQ6IPT4 315 aa14.8□□□□□ -0.04
NUDCD3-204ENST00000464812 GOLGA3Q08378 1498 aa14.8□□□□□ -0.04
NUDCD3-204ENST00000464812 KIAA0586Q9BVV6 1533 aa14.78□□□□□ -0.04
NUDCD3-204ENST00000464812 EHMT2Q96KQ7 1210 aa14.76□□□□□ -0.05
NUDCD3-204ENST00000464812 PRG4Q92954 1404 aaPredicted RBP14.75□□□□□ -0.05
NUDCD3-204ENST00000464812 POTEDQ86YR6 584 aa14.74□□□□□ -0.05
NUDCD3-204ENST00000464812 JPH4Q96JJ6 628 aa14.74□□□□□ -0.05
NUDCD3-204ENST00000464812 LOC105371045A0A1W2PR82 267 aa14.73□□□□□ -0.05
NUDCD3-204ENST00000464812 IQGAP2Q13576 1575 aa14.69□□□□□ -0.06
NUDCD3-204ENST00000464812 DISP1Q96F81 1524 aa14.69□□□□□ -0.06
NUDCD3-204ENST00000464812 UGGT2Q9NYU1 1516 aa14.65□□□□□ -0.06
NUDCD3-204ENST00000464812 TNIKQ9UKE5 1360 aa14.64□□□□□ -0.07
NUDCD3-204ENST00000464812 UBTFP17480 764 aaKnown RBP14.62□□□□□ -0.07
NUDCD3-204ENST00000464812 ADCY10Q96PN6 1610 aa14.62□□□□□ -0.07
NUDCD3-204ENST00000464812 SAMD9Q5K651 1589 aa14.6□□□□□ -0.07
NUDCD3-204ENST00000464812 KIAA0556O60303 1618 aa14.6□□□□□ -0.07
NUDCD3-204ENST00000464812 CEP162Q5TB80 1403 aa14.58□□□□□ -0.07
NUDCD3-204ENST00000464812 ARHGAP35Q9NRY4 1499 aa14.54□□□□□ -0.08
NUDCD3-204ENST00000464812 EFCAB5A4FU69 1503 aa14.54□□□□□ -0.08
NUDCD3-204ENST00000464812 PTPRGP23470 1445 aa14.52□□□□□ -0.08
NUDCD3-204ENST00000464812 CLIP1P30622 1438 aa14.52□□□□□ -0.08
NUDCD3-204ENST00000464812 MSH5O43196 834 aa14.52□□□□□ -0.09
NUDCD3-204ENST00000464812 RANGAP1P46060 587 aaPredicted RBP14.5□□□□□ -0.09
NUDCD3-204ENST00000464812 CARMIL2Q6F5E8 1435 aa14.49□□□□□ -0.09
NUDCD3-204ENST00000464812 KIF13AQ9H1H9 1805 aa14.49□□□□□ -0.09
NUDCD3-204ENST00000464812 PLB1Q6P1J6 1458 aa14.48□□□□□ -0.09
NUDCD3-204ENST00000464812 FHOD3Q2V2M9 1422 aa14.48□□□□□ -0.09
NUDCD3-204ENST00000464812 TTBK1Q5TCY1 1321 aaPredicted RBP14.47□□□□□ -0.09
NUDCD3-204ENST00000464812 UHRF1BP1LA0JNW5 1464 aa14.47□□□□□ -0.09
NUDCD3-204ENST00000464812 ABCA8O94911 1581 aa14.47□□□□□ -0.09
NUDCD3-204ENST00000464812 MAPKBP1O60336 1514 aa14.46□□□□□ -0.09
NUDCD3-204ENST00000464812 ABCC2Q92887 1545 aa14.46□□□□□ -0.09
NUDCD3-204ENST00000464812 UACAQ9BZF9 1416 aa14.45□□□□□ -0.1
NUDCD3-204ENST00000464812 KDM5BQ9UGL1 1544 aa14.43□□□□□ -0.1
NUDCD3-204ENST00000464812 PCF11O94913 1555 aaKnown RBP14.43□□□□□ -0.1
NUDCD3-204ENST00000464812 P3H3Q8IVL6 736 aa14.42□□□□□ -0.1
NUDCD3-204ENST00000464812 DIP2BQ9P265 1576 aa14.42□□□□□ -0.1
NUDCD3-204ENST00000464812 LRRIQ1Q96JM4 1722 aa14.41□□□□□ -0.1
NUDCD3-204ENST00000464812 ZCCHC11Q5TAX3 1644 aaKnown RBP14.41□□□□□ -0.1
NUDCD3-204ENST00000464812 TRHP20396 242 aaPredicted RBP14.4□□□□□ -0.1
NUDCD3-204ENST00000464812 ABCC10Q5T3U5 1492 aa14.39□□□□□ -0.11
NUDCD3-204ENST00000464812 PIAS4Q8N2W9 510 aaPredicted RBP14.39□□□□□ -0.11
NUDCD3-204ENST00000464812 VPS8Q8N3P4 1428 aa14.37□□□□□ -0.11
NUDCD3-204ENST00000464812 ASXL2Q76L83 1435 aa14.36□□□□□ -0.11
NUDCD3-204ENST00000464812 RAPGEF6Q8TEU7 1601 aa14.35□□□□□ -0.11
NUDCD3-204ENST00000464812 PPRC1Q5VV67 1664 aaKnown RBP14.34□□□□□ -0.11
NUDCD3-204ENST00000464812 ATP10BO94823 1461 aa14.33□□□□□ -0.12
NUDCD3-204ENST00000464812 NUP153P49790 1475 aaKnown RBP14.33□□□□□ -0.12
NUDCD3-204ENST00000464812 HECW1Q76N89 1606 aa14.33□□□□□ -0.12
NUDCD3-204ENST00000464812 FMN1Q68DA7 1419 aa14.32□□□□□ -0.12
NUDCD3-204ENST00000464812 CFAP43Q8NDM7 1665 aa14.32□□□□□ -0.12
NUDCD3-204ENST00000464812 FYCO1Q9BQS8 1478 aa14.31□□□□□ -0.12
NUDCD3-204ENST00000464812 CASKIN1Q8WXD9 1431 aa14.3□□□□□ -0.12
NUDCD3-204ENST00000464812 EPRSP07814 1512 aaKnown RBP14.3□□□□□ -0.12
NUDCD3-204ENST00000464812 GLI2P10070 1586 aa14.3□□□□□ -0.12
NUDCD3-204ENST00000464812 ARID3CA6NKF2 412 aa14.29□□□□□ -0.12
NUDCD3-204ENST00000464812 FAM69CQ0P6D2 419 aa14.29□□□□□ -0.12
NUDCD3-204ENST00000464812 PPP6R1Q9UPN7 881 aa14.29□□□□□ -0.12
NUDCD3-204ENST00000464812 NPM1P06748 294 aaKnown RBP eCLIP14.28□□□□□ -0.12
NUDCD3-204ENST00000464812 PLPPR3Q6T4P5 718 aa14.28□□□□□ -0.12
NUDCD3-204ENST00000464812 CDK13Q14004 1512 aaKnown RBP14.27□□□□□ -0.12
NUDCD3-204ENST00000464812 MAP3K4Q9Y6R4 1608 aa14.26□□□□□ -0.13
NUDCD3-204ENST00000464812 WDR7Q9Y4E6 1490 aa14.26□□□□□ -0.13
NUDCD3-204ENST00000464812 TSPOAP1O95153 1857 aa14.26□□□□□ -0.13
NUDCD3-204ENST00000464812 TIAM1Q13009 1591 aa14.25□□□□□ -0.13
NUDCD3-204ENST00000464812 ADRA2BP18089 450 aa14.23□□□□□ -0.13
NUDCD3-204ENST00000464812 COL17A1Q9UMD9 1497 aaPredicted RBP14.22□□□□□ -0.13
NUDCD3-204ENST00000464812 MAGI3Q5TCQ9 1506 aa14.21□□□□□ -0.13
NUDCD3-204ENST00000464812 CCDC18Q5T9S5 1454 aa14.19□□□□□ -0.14
NUDCD3-204ENST00000464812 MAP3K1Q13233 1512 aa14.18□□□□□ -0.14
NUDCD3-204ENST00000464812 ABCA9Q8IUA7 1624 aa14.16□□□□□ -0.14
NUDCD3-204ENST00000464812 KCNH8Q96L42 1107 aa14.15□□□□□ -0.14
NUDCD3-204ENST00000464812 ATP1B4Q9UN42 357 aaPredicted RBP14.14□□□□□ -0.15
NUDCD3-204ENST00000464812 KIF14Q15058 1648 aa14.13□□□□□ -0.15
NUDCD3-204ENST00000464812 EHBP1L1Q8N3D4 1523 aa14.13□□□□□ -0.15
NUDCD3-204ENST00000464812 TTC37Q6PGP7 1564 aa14.13□□□□□ -0.15
NUDCD3-204ENST00000464812 LRRC9Q6ZRR7 1453 aa14.12□□□□□ -0.15
NUDCD3-204ENST00000464812 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.12□□□□□ -0.155e-7■■□□□ 12.4
NUDCD3-204ENST00000464812 KDM6BO15054 1643 aa14.12□□□□□ -0.15
NUDCD3-204ENST00000464812 CD109Q6YHK3 1445 aa14.1□□□□□ -0.15
NUDCD3-204ENST00000464812 KANK4Q5T7N3 995 aaPredicted RBP14.1□□□□□ -0.15
NUDCD3-204ENST00000464812 SUPT6HQ7KZ85 1726 aaKnown RBP14.08□□□□□ -0.16
NUDCD3-204ENST00000464812 PPARGC1BQ86YN6 1023 aaKnown RBP14.07□□□□□ -0.16
NUDCD3-204ENST00000464812 TROQ12816 1431 aaPredicted RBP14.07□□□□□ -0.16
NUDCD3-204ENST00000464812 FRMPD1Q5SYB0 1578 aa14.05□□□□□ -0.16
NUDCD3-204ENST00000464812 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.04□□□□□ -0.16
NUDCD3-204ENST00000464812 HNRNPUL2Q1KMD3 747 aaKnown RBP14.04□□□□□ -0.16
NUDCD3-204ENST00000464812 MTUS2Q5JR59 1369 aa14.04□□□□□ -0.16
NUDCD3-204ENST00000464812 CDC42BPAQ5VT25 1732 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms