RNA–Protein interactions for RNA: ENST00000464646.1

RPP40-203, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5 BASIC

Gene RPP40, Length 1,042 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-203ENST00000464646 IGF1RP08069 1367 aa23.83■■□□□ 1.41
RPP40-203ENST00000464646 RUSC2Q8N2Y8 1516 aa23.82■■□□□ 1.4
RPP40-203ENST00000464646 CUL7Q14999 1698 aa23.81■■□□□ 1.4
RPP40-203ENST00000464646 TTBK1Q5TCY1 1321 aaPredicted RBP23.79■■□□□ 1.4
RPP40-203ENST00000464646 NPM1P06748 294 aaKnown RBP eCLIP23.77■■□□□ 1.4
RPP40-203ENST00000464646 CARMIL1Q5VZK9 1371 aa23.75■■□□□ 1.39
RPP40-203ENST00000464646 KIAA0586Q9BVV6 1533 aa23.72■■□□□ 1.39
RPP40-203ENST00000464646 CHIC1Q5VXU3 224 aa23.63■■□□□ 1.37
RPP40-203ENST00000464646 FAM69CQ0P6D2 419 aa23.6■■□□□ 1.37
RPP40-203ENST00000464646 CARMIL2Q6F5E8 1435 aa23.58■■□□□ 1.36
RPP40-203ENST00000464646 KIF13AQ9H1H9 1805 aa23.57■■□□□ 1.36
RPP40-203ENST00000464646 PTPRGP23470 1445 aa23.57■■□□□ 1.36
RPP40-203ENST00000464646 ADCY10Q96PN6 1610 aa23.56■■□□□ 1.36
RPP40-203ENST00000464646 IQGAP2Q13576 1575 aa23.54■■□□□ 1.36
RPP40-203ENST00000464646 RAPGEF2Q9Y4G8 1499 aa23.52■■□□□ 1.36
RPP40-203ENST00000464646 TNIKQ9UKE5 1360 aa23.51■■□□□ 1.35
RPP40-203ENST00000464646 ABCC10Q5T3U5 1492 aa23.48■■□□□ 1.35
RPP40-203ENST00000464646 MAPKBP1O60336 1514 aa23.47■■□□□ 1.35
RPP40-203ENST00000464646 TSPOAP1O95153 1857 aa23.44■■□□□ 1.34
RPP40-203ENST00000464646 DIP2BQ9P265 1576 aa23.42■■□□□ 1.34
RPP40-203ENST00000464646 ABCC2Q92887 1545 aa23.36■■□□□ 1.33
RPP40-203ENST00000464646 DISP1Q96F81 1524 aa23.36■■□□□ 1.33
RPP40-203ENST00000464646 UACAQ9BZF9 1416 aa23.35■■□□□ 1.33
RPP40-203ENST00000464646 CTTNBP2Q8WZ74 1663 aa23.35■■□□□ 1.33
RPP40-203ENST00000464646 UGGT2Q9NYU1 1516 aa23.33■■□□□ 1.33
RPP40-203ENST00000464646 KIAA0556O60303 1618 aa23.32■■□□□ 1.32
RPP40-203ENST00000464646 ASXL2Q76L83 1435 aa23.31■■□□□ 1.32
RPP40-203ENST00000464646 KDM6BO15054 1643 aa23.28■■□□□ 1.32
RPP40-203ENST00000464646 PLB1Q6P1J6 1458 aa23.28■■□□□ 1.32
RPP40-203ENST00000464646 UHRF1BP1LA0JNW5 1464 aa23.27■■□□□ 1.32
RPP40-203ENST00000464646 FAM9AQ8IZU1 332 aaPredicted RBP23.25■■□□□ 1.31
RPP40-203ENST00000464646 GOLGA3Q08378 1498 aa23.24■■□□□ 1.31
RPP40-203ENST00000464646 P3H3Q8IVL6 736 aa23.22■■□□□ 1.31
RPP40-203ENST00000464646 PRXQ9BXM0 1461 aa23.22■■□□□ 1.31
RPP40-203ENST00000464646 ZCCHC11Q5TAX3 1644 aaKnown RBP23.21■■□□□ 1.31
RPP40-203ENST00000464646 CSRNP3Q8WYN3 585 aa23.2■■□□□ 1.3
RPP40-203ENST00000464646 RANGAP1P46060 587 aaPredicted RBP23.19■■□□□ 1.3
RPP40-203ENST00000464646 KDM5BQ9UGL1 1544 aa23.18■■□□□ 1.3
RPP40-203ENST00000464646 ARID3CA6NKF2 412 aa23.16■■□□□ 1.3
RPP40-203ENST00000464646 KCNH8Q96L42 1107 aa23.15■■□□□ 1.3
RPP40-203ENST00000464646 GLI2P10070 1586 aa23.14■■□□□ 1.3
RPP40-203ENST00000464646 EPRSP07814 1512 aaKnown RBP23.13■■□□□ 1.29
RPP40-203ENST00000464646 WDR7Q9Y4E6 1490 aa23.08■■□□□ 1.29
RPP40-203ENST00000464646 PPRC1Q5VV67 1664 aaKnown RBP23.08■■□□□ 1.29
RPP40-203ENST00000464646 EHMT2Q96KQ7 1210 aa23.07■■□□□ 1.28
RPP40-203ENST00000464646 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.06■■□□□ 1.28
RPP40-203ENST00000464646 HNRNPUL2Q1KMD3 747 aaKnown RBP23.06■■□□□ 1.28
RPP40-203ENST00000464646 ABCA8O94911 1581 aa23.06■■□□□ 1.28
RPP40-203ENST00000464646 TEX14Q8IWB6 1497 aa23.05■■□□□ 1.28
RPP40-203ENST00000464646 MAP3K4Q9Y6R4 1608 aa23.04■■□□□ 1.28
RPP40-203ENST00000464646 EEA1Q15075 1411 aa23.04■■□□□ 1.28
RPP40-203ENST00000464646 CD109Q6YHK3 1445 aa22.98■■□□□ 1.27
RPP40-203ENST00000464646 KDM4FA0A1W2PPD8 638 aa22.96■■□□□ 1.27
RPP40-203ENST00000464646 CFAP43Q8NDM7 1665 aa22.93■■□□□ 1.26
RPP40-203ENST00000464646 SAMD9Q5K651 1589 aa22.93■■□□□ 1.26
RPP40-203ENST00000464646 COL17A1Q9UMD9 1497 aaPredicted RBP22.92■■□□□ 1.26
RPP40-203ENST00000464646 RAPGEF6Q8TEU7 1601 aa22.91■■□□□ 1.26
RPP40-203ENST00000464646 UBTFP17480 764 aaKnown RBP22.91■■□□□ 1.26
RPP40-203ENST00000464646 ATP10BO94823 1461 aa22.91■■□□□ 1.26
RPP40-203ENST00000464646 FHOD3Q2V2M9 1422 aa22.9■■□□□ 1.26
RPP40-203ENST00000464646 MAGI3Q5TCQ9 1506 aa22.85■■□□□ 1.25
RPP40-203ENST00000464646 KIF21BO75037 1637 aa22.84■■□□□ 1.25
RPP40-203ENST00000464646 ATP1B4Q9UN42 357 aaPredicted RBP22.83■■□□□ 1.25
RPP40-203ENST00000464646 ADGRL1O94910 1474 aa22.83■■□□□ 1.25
RPP40-203ENST00000464646 PLEKHD1A6NEE1 506 aa22.79■■□□□ 1.24
RPP40-203ENST00000464646 NUP153P49790 1475 aaKnown RBP22.76■■□□□ 1.23
RPP40-203ENST00000464646 EFCAB5A4FU69 1503 aa22.75■■□□□ 1.23
RPP40-203ENST00000464646 ABCA9Q8IUA7 1624 aa22.74■■□□□ 1.23
RPP40-203ENST00000464646 RAPGEF3O95398 923 aa22.69■■□□□ 1.22
RPP40-203ENST00000464646 ARAP3Q8WWN8 1544 aa22.66■■□□□ 1.22
RPP40-203ENST00000464646 PHLDB1Q86UU1 1377 aa22.65■■□□□ 1.22
RPP40-203ENST00000464646 CDK13Q14004 1512 aaKnown RBP22.63■■□□□ 1.21
RPP40-203ENST00000464646 ARID4BQ4LE39 1312 aaPredicted RBP22.62■■□□□ 1.21
RPP40-203ENST00000464646 NEO1Q92859 1461 aa22.62■■□□□ 1.21
RPP40-203ENST00000464646 FMN1Q68DA7 1419 aa22.6■■□□□ 1.21
RPP40-203ENST00000464646 ARHGAP35Q9NRY4 1499 aa22.58■■□□□ 1.2
RPP40-203ENST00000464646 HECW1Q76N89 1606 aa22.57■■□□□ 1.2
RPP40-203ENST00000464646 CDK11AQ9UQ88 783 aaPredicted RBP22.57■■□□□ 1.2
RPP40-203ENST00000464646 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.57■■□□□ 1.2
RPP40-203ENST00000464646 FANCAO15360 1455 aa22.55■■□□□ 1.2
RPP40-203ENST00000464646 AKNAQ7Z591 1439 aa22.55■■□□□ 1.2
RPP40-203ENST00000464646 TTC37Q6PGP7 1564 aa22.54■■□□□ 1.2
RPP40-203ENST00000464646 DENND4BO75064 1496 aaPredicted RBP22.54■■□□□ 1.2
RPP40-203ENST00000464646 CFAP74Q9C0B2 1584 aa22.53■■□□□ 1.2
RPP40-203ENST00000464646 FRMPD1Q5SYB0 1578 aa22.48■■□□□ 1.19
RPP40-203ENST00000464646 PLPPR3Q6T4P5 718 aa22.48■■□□□ 1.19
RPP40-203ENST00000464646 HECW2Q9P2P5 1572 aa22.47■■□□□ 1.19
RPP40-203ENST00000464646 MYT1LQ9UL68 1186 aa22.46■■□□□ 1.19
RPP40-203ENST00000464646 CLIP1P30622 1438 aa22.44■■□□□ 1.18
RPP40-203ENST00000464646 RICTORQ6R327 1708 aa22.44■■□□□ 1.18
RPP40-203ENST00000464646 EFCAB2Q5VUJ9 269 aa22.43■■□□□ 1.18
RPP40-203ENST00000464646 MYO5CQ9NQX4 1742 aa22.43■■□□□ 1.18
RPP40-203ENST00000464646 PLCH2O75038 1416 aa22.42■■□□□ 1.18
RPP40-203ENST00000464646 SCAPERQ9BY12 1400 aa22.42■■□□□ 1.18
RPP40-203ENST00000464646 KIF14Q15058 1648 aa22.42■■□□□ 1.18
RPP40-203ENST00000464646 MLECQ14165 292 aa22.41■■□□□ 1.18
RPP40-203ENST00000464646 ARHGEF40Q8TER5 1519 aa22.39■■□□□ 1.17
RPP40-203ENST00000464646 BCORL1Q5H9F3 1711 aa22.39■■□□□ 1.17
RPP40-203ENST00000464646 TROQ12816 1431 aaPredicted RBP22.39■■□□□ 1.17
RPP40-203ENST00000464646 LRRIQ1Q96JM4 1722 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms