RNA–Protein interactions for RNA: ENST00000464572.5

SUPT20H-204, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 1 (best)

Gene SUPT20H, Length 2,948 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-204ENST00000464572 CEP170Q5SW79 1584 aa20.6■□□□□ 0.89
SUPT20H-204ENST00000464572 RANGAP1P46060 587 aaPredicted RBP20.58■□□□□ 0.88
SUPT20H-204ENST00000464572 CTTNBP2Q8WZ74 1663 aa20.58■□□□□ 0.88
SUPT20H-204ENST00000464572 KIAA0586Q9BVV6 1533 aa20.55■□□□□ 0.88
SUPT20H-204ENST00000464572 OSCARQ8IYS5 282 aa20.53■□□□□ 0.88
SUPT20H-204ENST00000464572 IQGAP2Q13576 1575 aa20.52■□□□□ 0.87
SUPT20H-204ENST00000464572 CEP162Q5TB80 1403 aa20.5■□□□□ 0.87
SUPT20H-204ENST00000464572 JPH4Q96JJ6 628 aa20.46■□□□□ 0.87
SUPT20H-204ENST00000464572 CLIP1P30622 1438 aa20.46■□□□□ 0.87
SUPT20H-204ENST00000464572 CLASP1Q7Z460 1538 aa20.45■□□□□ 0.86
SUPT20H-204ENST00000464572 UGGT2Q9NYU1 1516 aa20.4■□□□□ 0.86
SUPT20H-204ENST00000464572 P3H3Q8IVL6 736 aa20.4■□□□□ 0.86
SUPT20H-204ENST00000464572 ARHGAP35Q9NRY4 1499 aa20.38■□□□□ 0.85
SUPT20H-204ENST00000464572 SHROOM2Q13796 1616 aa20.35■□□□□ 0.85
SUPT20H-204ENST00000464572 PRG4Q92954 1404 aaPredicted RBP20.35■□□□□ 0.85
SUPT20H-204ENST00000464572 EFCAB5A4FU69 1503 aa20.35■□□□□ 0.85
SUPT20H-204ENST00000464572 DISP1Q96F81 1524 aa20.34■□□□□ 0.85
SUPT20H-204ENST00000464572 SAMD9Q5K651 1589 aa20.34■□□□□ 0.85
SUPT20H-204ENST00000464572 CARMIL2Q6F5E8 1435 aa20.32■□□□□ 0.84
SUPT20H-204ENST00000464572 FHOD3Q2V2M9 1422 aa20.32■□□□□ 0.84
SUPT20H-204ENST00000464572 ARAP1Q96P48 1450 aa20.31■□□□□ 0.84
SUPT20H-204ENST00000464572 KIAA0556O60303 1618 aa20.31■□□□□ 0.84
SUPT20H-204ENST00000464572 ERCC6L2Q5T890 1561 aa20.27■□□□□ 0.84
SUPT20H-204ENST00000464572 TTBK1Q5TCY1 1321 aaPredicted RBP20.27■□□□□ 0.84
SUPT20H-204ENST00000464572 VPS8Q8N3P4 1428 aa20.2■□□□□ 0.82
SUPT20H-204ENST00000464572 FMN1Q68DA7 1419 aa20.19■□□□□ 0.82
SUPT20H-204ENST00000464572 PTPRGP23470 1445 aa20.18■□□□□ 0.82
SUPT20H-204ENST00000464572 ARHGEF11O15085 1522 aa20.15■□□□□ 0.82
SUPT20H-204ENST00000464572 ATP1B4Q9UN42 357 aaPredicted RBP20.13■□□□□ 0.81
SUPT20H-204ENST00000464572 PLB1Q6P1J6 1458 aa20.1■□□□□ 0.81
SUPT20H-204ENST00000464572 PCF11O94913 1555 aaKnown RBP20.1■□□□□ 0.81
SUPT20H-204ENST00000464572 CASKIN1Q8WXD9 1431 aa20.09■□□□□ 0.81
SUPT20H-204ENST00000464572 RIMBP3CA6NJZ7 1639 aa20.09■□□□□ 0.81
SUPT20H-204ENST00000464572 RIMBP3BA6NNM3 1639 aa20.09■□□□□ 0.81
SUPT20H-204ENST00000464572 RIMBP3Q9UFD9 1639 aa20.09■□□□□ 0.81
SUPT20H-204ENST00000464572 FYCO1Q9BQS8 1478 aa20.06■□□□□ 0.8
SUPT20H-204ENST00000464572 RAPGEF6Q8TEU7 1601 aa20.05■□□□□ 0.8
SUPT20H-204ENST00000464572 UACAQ9BZF9 1416 aa20.05■□□□□ 0.8
SUPT20H-204ENST00000464572 ABCA8O94911 1581 aa20.04■□□□□ 0.8
SUPT20H-204ENST00000464572 ARID3CA6NKF2 412 aa20.03■□□□□ 0.8
SUPT20H-204ENST00000464572 APLP2Q06481 763 aa20.02■□□□□ 0.8
SUPT20H-204ENST00000464572 CYB5RLQ6IPT4 315 aa20.01■□□□□ 0.79
SUPT20H-204ENST00000464572 HECW1Q76N89 1606 aa20.01■□□□□ 0.79
SUPT20H-204ENST00000464572 NUP153P49790 1475 aaKnown RBP20■□□□□ 0.79
SUPT20H-204ENST00000464572 ABCC2Q92887 1545 aa19.98■□□□□ 0.79
SUPT20H-204ENST00000464572 DNAJC5Q9H3Z4 198 aa19.98■□□□□ 0.79
SUPT20H-204ENST00000464572 EPRSP07814 1512 aaKnown RBP19.96■□□□□ 0.79
SUPT20H-204ENST00000464572 LRRIQ1Q96JM4 1722 aa19.96■□□□□ 0.79
SUPT20H-204ENST00000464572 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.96■□□□□ 0.79
SUPT20H-204ENST00000464572 HNRNPUL2Q1KMD3 747 aaKnown RBP19.96■□□□□ 0.79
SUPT20H-204ENST00000464572 UHRF1BP1LA0JNW5 1464 aa19.95■□□□□ 0.79
SUPT20H-204ENST00000464572 CDK13Q14004 1512 aaKnown RBP19.94■□□□□ 0.78
SUPT20H-204ENST00000464572 PPARGC1BQ86YN6 1023 aaKnown RBP19.94■□□□□ 0.78
SUPT20H-204ENST00000464572 ADCY10Q96PN6 1610 aa19.94■□□□□ 0.78
SUPT20H-204ENST00000464572 CCDC18Q5T9S5 1454 aa19.93■□□□□ 0.78
SUPT20H-204ENST00000464572 ATP10BO94823 1461 aa19.92■□□□□ 0.78
SUPT20H-204ENST00000464572 TIAM1Q13009 1591 aa19.92■□□□□ 0.78
SUPT20H-204ENST00000464572 MAP3K1Q13233 1512 aa19.9■□□□□ 0.78
SUPT20H-204ENST00000464572 KANK4Q5T7N3 995 aaPredicted RBP19.9■□□□□ 0.78
SUPT20H-204ENST00000464572 CFAP43Q8NDM7 1665 aa19.89■□□□□ 0.77
SUPT20H-204ENST00000464572 KDM5BQ9UGL1 1544 aa19.88■□□□□ 0.77
SUPT20H-204ENST00000464572 NPM1P06748 294 aaKnown RBP eCLIP19.86■□□□□ 0.77
SUPT20H-204ENST00000464572 CDK11AQ9UQ88 783 aaPredicted RBP19.86■□□□□ 0.77
SUPT20H-204ENST00000464572 ZCCHC11Q5TAX3 1644 aaKnown RBP19.85■□□□□ 0.77
SUPT20H-204ENST00000464572 LRRC9Q6ZRR7 1453 aa19.84■□□□□ 0.77
SUPT20H-204ENST00000464572 MTUS2Q5JR59 1369 aa19.84■□□□□ 0.77
SUPT20H-204ENST00000464572 PLEKHD1A6NEE1 506 aa19.83■□□□□ 0.76
SUPT20H-204ENST00000464572 MAGI3Q5TCQ9 1506 aa19.82■□□□□ 0.76
SUPT20H-204ENST00000464572 TROQ12816 1431 aaPredicted RBP19.77■□□□□ 0.76
SUPT20H-204ENST00000464572 EHBP1L1Q8N3D4 1523 aa19.77■□□□□ 0.75
SUPT20H-204ENST00000464572 ASXL2Q76L83 1435 aa19.74■□□□□ 0.75
SUPT20H-204ENST00000464572 KCNH8Q96L42 1107 aa19.73■□□□□ 0.75
SUPT20H-204ENST00000464572 WDR7Q9Y4E6 1490 aa19.71■□□□□ 0.75
SUPT20H-204ENST00000464572 SUPT6HQ7KZ85 1726 aaKnown RBP19.7■□□□□ 0.74
SUPT20H-204ENST00000464572 NCOA2Q15596 1464 aa19.69■□□□□ 0.74
SUPT20H-204ENST00000464572 KIF14Q15058 1648 aa19.68■□□□□ 0.74
SUPT20H-204ENST00000464572 MAPKBP1O60336 1514 aa19.68■□□□□ 0.74
SUPT20H-204ENST00000464572 PHLDB1Q86UU1 1377 aa19.65■□□□□ 0.74
SUPT20H-204ENST00000464572 ABCC10Q5T3U5 1492 aa19.61■□□□□ 0.73
SUPT20H-204ENST00000464572 CCNB3Q8WWL7 1395 aa19.61■□□□□ 0.73
SUPT20H-204ENST00000464572 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.61■□□□□ 0.73
SUPT20H-204ENST00000464572 TTC37Q6PGP7 1564 aa19.58■□□□□ 0.73
SUPT20H-204ENST00000464572 MYOM3Q5VTT5 1437 aa19.58■□□□□ 0.72
SUPT20H-204ENST00000464572 GPATCH8Q9UKJ3 1502 aaKnown RBP19.56■□□□□ 0.72
SUPT20H-204ENST00000464572 FAM69CQ0P6D2 419 aa19.54■□□□□ 0.72
SUPT20H-204ENST00000464572 ABCA9Q8IUA7 1624 aa19.54■□□□□ 0.72
SUPT20H-204ENST00000464572 CFDP1Q9UEE9 299 aaPredicted RBP19.53■□□□□ 0.72
SUPT20H-204ENST00000464572 FGD6Q6ZV73 1430 aa19.53■□□□□ 0.72
SUPT20H-204ENST00000464572 CDC42BPAQ5VT25 1732 aa19.53■□□□□ 0.72
SUPT20H-204ENST00000464572 TRIM26Q12899 539 aaPredicted RBP19.52■□□□□ 0.72
SUPT20H-204ENST00000464572 DIP2BQ9P265 1576 aa19.52■□□□□ 0.71
SUPT20H-204ENST00000464572 ITSN2Q9NZM3 1697 aa19.51■□□□□ 0.71
SUPT20H-204ENST00000464572 RRBP1Q9P2E9 1410 aaKnown RBP19.51■□□□□ 0.71
SUPT20H-204ENST00000464572 MYO5CQ9NQX4 1742 aa19.5■□□□□ 0.71
SUPT20H-204ENST00000464572 PLCH2O75038 1416 aa19.5■□□□□ 0.71
SUPT20H-204ENST00000464572 ZNF777Q9ULD5 760 aaPredicted RBP19.5■□□□□ 0.71
SUPT20H-204ENST00000464572 MIA2Q96PC5 1412 aa19.5■□□□□ 0.71
SUPT20H-204ENST00000464572 CD109Q6YHK3 1445 aa19.49■□□□□ 0.71
SUPT20H-204ENST00000464572 GLI2P10070 1586 aa19.49■□□□□ 0.71
SUPT20H-204ENST00000464572 FAM50AQ14320 339 aaKnown RBP19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms