RNA–Protein interactions for RNA: ENST00000464553.2

SSNA1-204, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSNA1, Length 723 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-204ENST00000464553 PRG4Q92954 1404 aaPredicted RBP27.57■■■□□ 2
SSNA1-204ENST00000464553 RUSC2Q8N2Y8 1516 aa27.54■■■□□ 2
SSNA1-204ENST00000464553 ERCC6L2Q5T890 1561 aa27.5■■□□□ 1.99
SSNA1-204ENST00000464553 RAPGEF2Q9Y4G8 1499 aa27.5■■□□□ 1.99
SSNA1-204ENST00000464553 TRHP20396 242 aaPredicted RBP27.38■■□□□ 1.97
SSNA1-204ENST00000464553 CARMIL2Q6F5E8 1435 aa27.35■■□□□ 1.97
SSNA1-204ENST00000464553 PRXQ9BXM0 1461 aa27.34■■□□□ 1.97
SSNA1-204ENST00000464553 EEA1Q15075 1411 aa27.33■■□□□ 1.97
SSNA1-204ENST00000464553 CSRNP3Q8WYN3 585 aa27.33■■□□□ 1.97
SSNA1-204ENST00000464553 IQGAP2Q13576 1575 aa27.32■■□□□ 1.96
SSNA1-204ENST00000464553 PTPRGP23470 1445 aa27.25■■□□□ 1.95
SSNA1-204ENST00000464553 TNIKQ9UKE5 1360 aa27.25■■□□□ 1.95
SSNA1-204ENST00000464553 NPM1P06748 294 aaKnown RBP eCLIP27.25■■□□□ 1.95
SSNA1-204ENST00000464553 CHIC1Q5VXU3 224 aa27.23■■□□□ 1.95
SSNA1-204ENST00000464553 UGGT2Q9NYU1 1516 aa27.22■■□□□ 1.95
SSNA1-204ENST00000464553 DISP1Q96F81 1524 aa27.17■■□□□ 1.94
SSNA1-204ENST00000464553 GOLGA3Q08378 1498 aa27.12■■□□□ 1.93
SSNA1-204ENST00000464553 CTTNBP2Q8WZ74 1663 aa27.09■■□□□ 1.93
SSNA1-204ENST00000464553 ADCY10Q96PN6 1610 aa27.08■■□□□ 1.93
SSNA1-204ENST00000464553 UHRF1BP1LA0JNW5 1464 aa27.06■■□□□ 1.92
SSNA1-204ENST00000464553 UACAQ9BZF9 1416 aa27.06■■□□□ 1.92
SSNA1-204ENST00000464553 MAPKBP1O60336 1514 aa27.06■■□□□ 1.92
SSNA1-204ENST00000464553 KIAA0556O60303 1618 aa27.04■■□□□ 1.92
SSNA1-204ENST00000464553 FAM9AQ8IZU1 332 aaPredicted RBP27.03■■□□□ 1.92
SSNA1-204ENST00000464553 TTBK1Q5TCY1 1321 aaPredicted RBP27.02■■□□□ 1.92
SSNA1-204ENST00000464553 ABCC2Q92887 1545 aa27■■□□□ 1.91
SSNA1-204ENST00000464553 ABCC10Q5T3U5 1492 aa26.98■■□□□ 1.91
SSNA1-204ENST00000464553 FAM69CQ0P6D2 419 aa26.94■■□□□ 1.9
SSNA1-204ENST00000464553 KIF21BO75037 1637 aa26.92■■□□□ 1.9
SSNA1-204ENST00000464553 KDM5BQ9UGL1 1544 aa26.9■■□□□ 1.9
SSNA1-204ENST00000464553 PLB1Q6P1J6 1458 aa26.89■■□□□ 1.9
SSNA1-204ENST00000464553 ASXL2Q76L83 1435 aa26.84■■□□□ 1.89
SSNA1-204ENST00000464553 KIF13AQ9H1H9 1805 aa26.83■■□□□ 1.89
SSNA1-204ENST00000464553 DIP2BQ9P265 1576 aa26.82■■□□□ 1.88
SSNA1-204ENST00000464553 SAMD9Q5K651 1589 aa26.8■■□□□ 1.88
SSNA1-204ENST00000464553 ABCA8O94911 1581 aa26.8■■□□□ 1.88
SSNA1-204ENST00000464553 P3H3Q8IVL6 736 aa26.79■■□□□ 1.88
SSNA1-204ENST00000464553 UBTFP17480 764 aaKnown RBP26.78■■□□□ 1.88
SSNA1-204ENST00000464553 GLI2P10070 1586 aa26.74■■□□□ 1.87
SSNA1-204ENST00000464553 ZCCHC11Q5TAX3 1644 aaKnown RBP26.72■■□□□ 1.87
SSNA1-204ENST00000464553 EFCAB5A4FU69 1503 aa26.7■■□□□ 1.87
SSNA1-204ENST00000464553 EPRSP07814 1512 aaKnown RBP26.67■■□□□ 1.86
SSNA1-204ENST00000464553 RANGAP1P46060 587 aaPredicted RBP26.67■■□□□ 1.86
SSNA1-204ENST00000464553 WDR7Q9Y4E6 1490 aa26.67■■□□□ 1.86
SSNA1-204ENST00000464553 ATP10BO94823 1461 aa26.62■■□□□ 1.85
SSNA1-204ENST00000464553 FHOD3Q2V2M9 1422 aa26.61■■□□□ 1.85
SSNA1-204ENST00000464553 RAPGEF6Q8TEU7 1601 aa26.58■■□□□ 1.85
SSNA1-204ENST00000464553 EHMT2Q96KQ7 1210 aa26.57■■□□□ 1.84
SSNA1-204ENST00000464553 KCNH8Q96L42 1107 aa26.55■■□□□ 1.84
SSNA1-204ENST00000464553 TEX14Q8IWB6 1497 aa26.53■■□□□ 1.84
SSNA1-204ENST00000464553 NUP153P49790 1475 aaKnown RBP26.52■■□□□ 1.84
SSNA1-204ENST00000464553 FMN1Q68DA7 1419 aa26.52■■□□□ 1.84
SSNA1-204ENST00000464553 MAP3K4Q9Y6R4 1608 aa26.52■■□□□ 1.84
SSNA1-204ENST00000464553 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.5■■□□□ 1.83
SSNA1-204ENST00000464553 HNRNPUL2Q1KMD3 747 aaKnown RBP26.5■■□□□ 1.83
SSNA1-204ENST00000464553 ARHGAP35Q9NRY4 1499 aa26.49■■□□□ 1.83
SSNA1-204ENST00000464553 TSPOAP1O95153 1857 aa26.49■■□□□ 1.83
SSNA1-204ENST00000464553 CD109Q6YHK3 1445 aa26.48■■□□□ 1.83
SSNA1-204ENST00000464553 ARID3CA6NKF2 412 aa26.48■■□□□ 1.83
SSNA1-204ENST00000464553 PLEKHD1A6NEE1 506 aa26.47■■□□□ 1.83
SSNA1-204ENST00000464553 KDM6BO15054 1643 aa26.46■■□□□ 1.83
SSNA1-204ENST00000464553 MAGI3Q5TCQ9 1506 aa26.45■■□□□ 1.83
SSNA1-204ENST00000464553 PPRC1Q5VV67 1664 aaKnown RBP26.44■■□□□ 1.82
SSNA1-204ENST00000464553 CFAP43Q8NDM7 1665 aa26.43■■□□□ 1.82
SSNA1-204ENST00000464553 PHLDB1Q86UU1 1377 aa26.38■■□□□ 1.81
SSNA1-204ENST00000464553 CDK11AQ9UQ88 783 aaPredicted RBP26.36■■□□□ 1.81
SSNA1-204ENST00000464553 ABCA9Q8IUA7 1624 aa26.33■■□□□ 1.81
SSNA1-204ENST00000464553 ATP1B4Q9UN42 357 aaPredicted RBP26.31■■□□□ 1.8
SSNA1-204ENST00000464553 COL17A1Q9UMD9 1497 aaPredicted RBP26.3■■□□□ 1.8
SSNA1-204ENST00000464553 HECW1Q76N89 1606 aa26.3■■□□□ 1.8
SSNA1-204ENST00000464553 CLIP1P30622 1438 aa26.3■■□□□ 1.8
SSNA1-204ENST00000464553 CASKIN1Q8WXD9 1431 aa26.26■■□□□ 1.79
SSNA1-204ENST00000464553 ARAP3Q8WWN8 1544 aa26.24■■□□□ 1.79
SSNA1-204ENST00000464553 NEO1Q92859 1461 aa26.23■■□□□ 1.79
SSNA1-204ENST00000464553 CDK13Q14004 1512 aaKnown RBP26.23■■□□□ 1.79
SSNA1-204ENST00000464553 AEBP2Q6ZN18 517 aaPredicted RBP26.2■■□□□ 1.78
SSNA1-204ENST00000464553 CCDC18Q5T9S5 1454 aa26.18■■□□□ 1.78
SSNA1-204ENST00000464553 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.16■■□□□ 1.78
SSNA1-204ENST00000464553 TROQ12816 1431 aaPredicted RBP26.15■■□□□ 1.78
SSNA1-204ENST00000464553 FYCO1Q9BQS8 1478 aa26.15■■□□□ 1.78
SSNA1-204ENST00000464553 PLCH2O75038 1416 aa26.11■■□□□ 1.77
SSNA1-204ENST00000464553 CEP162Q5TB80 1403 aa26.1■■□□□ 1.77
SSNA1-204ENST00000464553 AKNAQ7Z591 1439 aa26.08■■□□□ 1.77
SSNA1-204ENST00000464553 FANCAO15360 1455 aa26.08■■□□□ 1.77
SSNA1-204ENST00000464553 PCF11O94913 1555 aaKnown RBP26.07■■□□□ 1.76
SSNA1-204ENST00000464553 EFCAB2Q5VUJ9 269 aa26.07■■□□□ 1.76
SSNA1-204ENST00000464553 TTC37Q6PGP7 1564 aa26.05■■□□□ 1.76
SSNA1-204ENST00000464553 CFAP74Q9C0B2 1584 aa26.05■■□□□ 1.76
SSNA1-204ENST00000464553 LOC105371045A0A1W2PR82 267 aa26.05■■□□□ 1.76
SSNA1-204ENST00000464553 RAPGEF3O95398 923 aa26.04■■□□□ 1.76
SSNA1-204ENST00000464553 KDM4FA0A1W2PPD8 638 aa26.03■■□□□ 1.76
SSNA1-204ENST00000464553 DENND4BO75064 1496 aaPredicted RBP26.03■■□□□ 1.76
SSNA1-204ENST00000464553 KIF14Q15058 1648 aa26.03■■□□□ 1.76
SSNA1-204ENST00000464553 LRRIQ1Q96JM4 1722 aa26■■□□□ 1.75
SSNA1-204ENST00000464553 SCAPERQ9BY12 1400 aa25.93■■□□□ 1.74
SSNA1-204ENST00000464553 ADGRL1O94910 1474 aa25.92■■□□□ 1.74
SSNA1-204ENST00000464553 MYO5CQ9NQX4 1742 aa25.92■■□□□ 1.74
SSNA1-204ENST00000464553 MAGI2Q86UL8 1455 aa25.91■■□□□ 1.74
SSNA1-204ENST00000464553 MTUS2Q5JR59 1369 aa25.89■■□□□ 1.74
SSNA1-204ENST00000464553 FRMPD1Q5SYB0 1578 aa25.89■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms