RNA–Protein interactions for RNA: ENST00000464520.1

ABCA2-211, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 2

Gene ABCA2, Length 886 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-211ENST00000464520 PRG4Q92954 1404 aaPredicted RBP41.83■■■■■ 4.29
ABCA2-211ENST00000464520 ERCC6L2Q5T890 1561 aa41.82■■■■■ 4.29
ABCA2-211ENST00000464520 RUSC2Q8N2Y8 1516 aa41.79■■■■■ 4.28
ABCA2-211ENST00000464520 TRHP20396 242 aaPredicted RBP41.65■■■■■ 4.26
ABCA2-211ENST00000464520 RAPGEF2Q9Y4G8 1499 aa41.65■■■■■ 4.26
ABCA2-211ENST00000464520 CARMIL2Q6F5E8 1435 aa41.44■■■■■ 4.22
ABCA2-211ENST00000464520 IQGAP2Q13576 1575 aa41.43■■■■■ 4.22
ABCA2-211ENST00000464520 PRXQ9BXM0 1461 aa41.41■■■■■ 4.22
ABCA2-211ENST00000464520 CSRNP3Q8WYN3 585 aa41.36■■■■■ 4.21
ABCA2-211ENST00000464520 PTPRGP23470 1445 aa41.33■■■■■ 4.21
ABCA2-211ENST00000464520 NPM1P06748 294 aaKnown RBP eCLIP41.32■■■■■ 4.21
ABCA2-211ENST00000464520 EEA1Q15075 1411 aa41.31■■■■■ 4.2
ABCA2-211ENST00000464520 TNIKQ9UKE5 1360 aa41.31■■■■■ 4.2
ABCA2-211ENST00000464520 UGGT2Q9NYU1 1516 aa41.26■■■■■ 4.2
ABCA2-211ENST00000464520 DISP1Q96F81 1524 aa41.2■■■■■ 4.19
ABCA2-211ENST00000464520 CHIC1Q5VXU3 224 aa41.2■■■■■ 4.19
ABCA2-211ENST00000464520 TTBK1Q5TCY1 1321 aaPredicted RBP41.13■■■■■ 4.17
ABCA2-211ENST00000464520 ADCY10Q96PN6 1610 aa41.12■■■■■ 4.17
ABCA2-211ENST00000464520 CTTNBP2Q8WZ74 1663 aa41.07■■■■■ 4.17
ABCA2-211ENST00000464520 GOLGA3Q08378 1498 aa41.06■■■■■ 4.16
ABCA2-211ENST00000464520 MAPKBP1O60336 1514 aa41.04■■■■■ 4.16
ABCA2-211ENST00000464520 UACAQ9BZF9 1416 aa41.01■■■■■ 4.16
ABCA2-211ENST00000464520 KIAA0556O60303 1618 aa41.01■■■■■ 4.16
ABCA2-211ENST00000464520 UHRF1BP1LA0JNW5 1464 aa41.01■■■■■ 4.16
ABCA2-211ENST00000464520 FAM9AQ8IZU1 332 aaPredicted RBP41■■■■■ 4.15
ABCA2-211ENST00000464520 ABCC2Q92887 1545 aa40.96■■■■■ 4.15
ABCA2-211ENST00000464520 ABCC10Q5T3U5 1492 aa40.94■■■■■ 4.14
ABCA2-211ENST00000464520 FAM69CQ0P6D2 419 aa40.92■■■■■ 4.14
ABCA2-211ENST00000464520 KIF13AQ9H1H9 1805 aa40.79■■■■■ 4.12
ABCA2-211ENST00000464520 KDM5BQ9UGL1 1544 aa40.78■■■■■ 4.12
ABCA2-211ENST00000464520 PLB1Q6P1J6 1458 aa40.77■■■■■ 4.12
ABCA2-211ENST00000464520 KIF21BO75037 1637 aa40.76■■■■■ 4.12
ABCA2-211ENST00000464520 DIP2BQ9P265 1576 aa40.74■■■■■ 4.11
ABCA2-211ENST00000464520 ASXL2Q76L83 1435 aa40.73■■■■■ 4.11
ABCA2-211ENST00000464520 P3H3Q8IVL6 736 aa40.69■■■■■ 4.1
ABCA2-211ENST00000464520 ABCA8O94911 1581 aa40.64■■■■■ 4.1
ABCA2-211ENST00000464520 SAMD9Q5K651 1589 aa40.62■■■■■ 4.09
ABCA2-211ENST00000464520 UBTFP17480 764 aaKnown RBP40.57■■■■■ 4.09
ABCA2-211ENST00000464520 ZCCHC11Q5TAX3 1644 aaKnown RBP40.56■■■■■ 4.08
ABCA2-211ENST00000464520 RANGAP1P46060 587 aaPredicted RBP40.54■■■■■ 4.08
ABCA2-211ENST00000464520 GLI2P10070 1586 aa40.53■■■■■ 4.08
ABCA2-211ENST00000464520 EPRSP07814 1512 aaKnown RBP40.48■■■■■ 4.07
ABCA2-211ENST00000464520 WDR7Q9Y4E6 1490 aa40.45■■■■■ 4.07
ABCA2-211ENST00000464520 EFCAB5A4FU69 1503 aa40.43■■■■■ 4.06
ABCA2-211ENST00000464520 EHMT2Q96KQ7 1210 aa40.43■■■■■ 4.06
ABCA2-211ENST00000464520 FHOD3Q2V2M9 1422 aa40.39■■■■■ 4.06
ABCA2-211ENST00000464520 ATP10BO94823 1461 aa40.38■■■■■ 4.05
ABCA2-211ENST00000464520 TSPOAP1O95153 1857 aa40.32■■■■■ 4.04
ABCA2-211ENST00000464520 RAPGEF6Q8TEU7 1601 aa40.31■■■■■ 4.04
ABCA2-211ENST00000464520 KCNH8Q96L42 1107 aa40.31■■■■■ 4.04
ABCA2-211ENST00000464520 ARID3CA6NKF2 412 aa40.29■■■■■ 4.04
ABCA2-211ENST00000464520 MAP3K4Q9Y6R4 1608 aa40.24■■■■■ 4.03
ABCA2-211ENST00000464520 TEX14Q8IWB6 1497 aa40.22■■■■■ 4.03
ABCA2-211ENST00000464520 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP40.22■■■■■ 4.03
ABCA2-211ENST00000464520 HNRNPUL2Q1KMD3 747 aaKnown RBP40.22■■■■■ 4.03
ABCA2-211ENST00000464520 NUP153P49790 1475 aaKnown RBP40.21■■■■■ 4.03
ABCA2-211ENST00000464520 KDM6BO15054 1643 aa40.21■■■■■ 4.03
ABCA2-211ENST00000464520 PPRC1Q5VV67 1664 aaKnown RBP40.18■■■■■ 4.02
ABCA2-211ENST00000464520 CD109Q6YHK3 1445 aa40.17■■■■■ 4.02
ABCA2-211ENST00000464520 ARHGAP35Q9NRY4 1499 aa40.15■■■■■ 4.02
ABCA2-211ENST00000464520 FMN1Q68DA7 1419 aa40.15■■■■■ 4.02
ABCA2-211ENST00000464520 MAGI3Q5TCQ9 1506 aa40.11■■■■■ 4.01
ABCA2-211ENST00000464520 PLEKHD1A6NEE1 506 aa40.1■■■■■ 4.01
ABCA2-211ENST00000464520 CFAP43Q8NDM7 1665 aa40.08■■■■■ 4.01
ABCA2-211ENST00000464520 COL17A1Q9UMD9 1497 aaPredicted RBP39.97■■■■□ 3.99
ABCA2-211ENST00000464520 ATP1B4Q9UN42 357 aaPredicted RBP39.94■■■■□ 3.98
ABCA2-211ENST00000464520 ABCA9Q8IUA7 1624 aa39.94■■■■□ 3.98
ABCA2-211ENST00000464520 PHLDB1Q86UU1 1377 aa39.91■■■■□ 3.98
ABCA2-211ENST00000464520 CDK11AQ9UQ88 783 aaPredicted RBP39.89■■■■□ 3.98
ABCA2-211ENST00000464520 AEBP2Q6ZN18 517 aaPredicted RBP39.88■■■■□ 3.97
ABCA2-211ENST00000464520 HECW1Q76N89 1606 aa39.86■■■■□ 3.97
ABCA2-211ENST00000464520 CLIP1P30622 1438 aa39.82■■■■□ 3.97
ABCA2-211ENST00000464520 CDK13Q14004 1512 aaKnown RBP39.81■■■■□ 3.96
ABCA2-211ENST00000464520 ARAP3Q8WWN8 1544 aa39.78■■■■□ 3.96
ABCA2-211ENST00000464520 NEO1Q92859 1461 aa39.75■■■■□ 3.95
ABCA2-211ENST00000464520 CASKIN1Q8WXD9 1431 aa39.75■■■■□ 3.95
ABCA2-211ENST00000464520 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP39.69■■■■□ 3.94
ABCA2-211ENST00000464520 CCDC18Q5T9S5 1454 aa39.62■■■■□ 3.93
ABCA2-211ENST00000464520 TROQ12816 1431 aaPredicted RBP39.62■■■■□ 3.93
ABCA2-211ENST00000464520 KDM4FA0A1W2PPD8 638 aa39.59■■■■□ 3.93
ABCA2-211ENST00000464520 FYCO1Q9BQS8 1478 aa39.59■■■■□ 3.93
ABCA2-211ENST00000464520 PCF11O94913 1555 aaKnown RBP39.57■■■■□ 3.92
ABCA2-211ENST00000464520 PLCH2O75038 1416 aa39.57■■■■□ 3.92
ABCA2-211ENST00000464520 FANCAO15360 1455 aa39.56■■■■□ 3.92
ABCA2-211ENST00000464520 TTC37Q6PGP7 1564 aa39.55■■■■□ 3.92
ABCA2-211ENST00000464520 RAPGEF3O95398 923 aa39.55■■■■□ 3.92
ABCA2-211ENST00000464520 AKNAQ7Z591 1439 aa39.55■■■■□ 3.92
ABCA2-211ENST00000464520 CEP162Q5TB80 1403 aa39.52■■■■□ 3.92
ABCA2-211ENST00000464520 CFAP74Q9C0B2 1584 aa39.49■■■■□ 3.91
ABCA2-211ENST00000464520 EFCAB2Q5VUJ9 269 aa39.48■■■■□ 3.91
ABCA2-211ENST00000464520 LRRIQ1Q96JM4 1722 aa39.48■■■■□ 3.91
ABCA2-211ENST00000464520 LOC105371045A0A1W2PR82 267 aa39.47■■■■□ 3.91
ABCA2-211ENST00000464520 DENND4BO75064 1496 aaPredicted RBP39.46■■■■□ 3.91
ABCA2-211ENST00000464520 KIF14Q15058 1648 aa39.46■■■■□ 3.91
ABCA2-211ENST00000464520 ADGRL1O94910 1474 aa39.37■■■■□ 3.89
ABCA2-211ENST00000464520 MYO5CQ9NQX4 1742 aa39.33■■■■□ 3.89
ABCA2-211ENST00000464520 SCAPERQ9BY12 1400 aa39.32■■■■□ 3.89
ABCA2-211ENST00000464520 FRMPD1Q5SYB0 1578 aa39.31■■■■□ 3.88
ABCA2-211ENST00000464520 ARHGAP5Q13017 1502 aa39.25■■■■□ 3.87
ABCA2-211ENST00000464520 RICTORQ6R327 1708 aa39.25■■■■□ 3.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms