RNA–Protein interactions for RNA: ENST00000464304.1

HMG20B-208, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-208ENST00000464304 EEA1Q15075 1411 aa31.37■■■□□ 2.61
HMG20B-208ENST00000464304 RAPGEF2Q9Y4G8 1499 aa31.33■■■□□ 2.61
HMG20B-208ENST00000464304 PRXQ9BXM0 1461 aa31.29■■■□□ 2.6
HMG20B-208ENST00000464304 FAM9AQ8IZU1 332 aaPredicted RBP31.27■■■□□ 2.6
HMG20B-208ENST00000464304 CSRNP3Q8WYN3 585 aa31.27■■■□□ 2.6
HMG20B-208ENST00000464304 SHROOM2Q13796 1616 aa31.26■■■□□ 2.59
HMG20B-208ENST00000464304 CTTNBP2Q8WZ74 1663 aa31.19■■■□□ 2.58
HMG20B-208ENST00000464304 KIAA0586Q9BVV6 1533 aa31.19■■■□□ 2.58
HMG20B-208ENST00000464304 ERCC6L2Q5T890 1561 aa31.13■■■□□ 2.57
HMG20B-208ENST00000464304 KIF21BO75037 1637 aa31.13■■■□□ 2.57
HMG20B-208ENST00000464304 IQGAP2Q13576 1575 aa31.12■■■□□ 2.57
HMG20B-208ENST00000464304 JPH4Q96JJ6 628 aa31.07■■■□□ 2.56
HMG20B-208ENST00000464304 PRG4Q92954 1404 aaPredicted RBP31.04■■■□□ 2.56
HMG20B-208ENST00000464304 AEBP2Q6ZN18 517 aaPredicted RBP31.02■■■□□ 2.56
HMG20B-208ENST00000464304 UGGT2Q9NYU1 1516 aa30.93■■■□□ 2.54
HMG20B-208ENST00000464304 GOLGA3Q08378 1498 aa30.9■■■□□ 2.54
HMG20B-208ENST00000464304 EHMT2Q96KQ7 1210 aa30.86■■■□□ 2.53
HMG20B-208ENST00000464304 DISP1Q96F81 1524 aa30.85■■■□□ 2.53
HMG20B-208ENST00000464304 KIAA0556O60303 1618 aa30.84■■■□□ 2.53
HMG20B-208ENST00000464304 CARMIL2Q6F5E8 1435 aa30.82■■■□□ 2.52
HMG20B-208ENST00000464304 UBTFP17480 764 aaKnown RBP30.74■■■□□ 2.51
HMG20B-208ENST00000464304 KIF13AQ9H1H9 1805 aa30.73■■■□□ 2.51
HMG20B-208ENST00000464304 SAMD9Q5K651 1589 aa30.72■■■□□ 2.51
HMG20B-208ENST00000464304 TNIKQ9UKE5 1360 aa30.71■■■□□ 2.51
HMG20B-208ENST00000464304 PTPRGP23470 1445 aa30.67■■■□□ 2.5
HMG20B-208ENST00000464304 TTBK1Q5TCY1 1321 aaPredicted RBP30.65■■■□□ 2.5
HMG20B-208ENST00000464304 RANGAP1P46060 587 aaPredicted RBP30.63■■■□□ 2.49
HMG20B-208ENST00000464304 ADCY10Q96PN6 1610 aa30.62■■■□□ 2.49
HMG20B-208ENST00000464304 EFCAB5A4FU69 1503 aa30.58■■■□□ 2.49
HMG20B-208ENST00000464304 P3H3Q8IVL6 736 aa30.57■■■□□ 2.48
HMG20B-208ENST00000464304 FHOD3Q2V2M9 1422 aa30.5■■■□□ 2.47
HMG20B-208ENST00000464304 UACAQ9BZF9 1416 aa30.49■■■□□ 2.47
HMG20B-208ENST00000464304 ABCC2Q92887 1545 aa30.48■■■□□ 2.47
HMG20B-208ENST00000464304 ABCA8O94911 1581 aa30.47■■■□□ 2.47
HMG20B-208ENST00000464304 ARHGAP35Q9NRY4 1499 aa30.47■■■□□ 2.47
HMG20B-208ENST00000464304 UHRF1BP1LA0JNW5 1464 aa30.46■■■□□ 2.47
HMG20B-208ENST00000464304 PLB1Q6P1J6 1458 aa30.46■■■□□ 2.47
HMG20B-208ENST00000464304 LOC105371045A0A1W2PR82 267 aa30.41■■■□□ 2.46
HMG20B-208ENST00000464304 RAPGEF6Q8TEU7 1601 aa30.38■■■□□ 2.45
HMG20B-208ENST00000464304 ZCCHC11Q5TAX3 1644 aaKnown RBP30.36■■■□□ 2.45
HMG20B-208ENST00000464304 NPM1P06748 294 aaKnown RBP eCLIP30.34■■■□□ 2.45
HMG20B-208ENST00000464304 KDM5BQ9UGL1 1544 aa30.33■■■□□ 2.45
HMG20B-208ENST00000464304 CLIP1P30622 1438 aa30.33■■■□□ 2.45
HMG20B-208ENST00000464304 MAPKBP1O60336 1514 aa30.32■■■□□ 2.44
HMG20B-208ENST00000464304 DIP2BQ9P265 1576 aa30.31■■■□□ 2.44
HMG20B-208ENST00000464304 ABCC10Q5T3U5 1492 aa30.3■■■□□ 2.44
HMG20B-208ENST00000464304 FAM69CQ0P6D2 419 aa30.28■■■□□ 2.44
HMG20B-208ENST00000464304 CEP162Q5TB80 1403 aa30.27■■■□□ 2.44
HMG20B-208ENST00000464304 TSPOAP1O95153 1857 aa30.25■■■□□ 2.43
HMG20B-208ENST00000464304 FMN1Q68DA7 1419 aa30.24■■■□□ 2.43
HMG20B-208ENST00000464304 NUP153P49790 1475 aaKnown RBP30.22■■■□□ 2.43
HMG20B-208ENST00000464304 ASXL2Q76L83 1435 aa30.18■■■□□ 2.42
HMG20B-208ENST00000464304 ARID3CA6NKF2 412 aa30.17■■■□□ 2.42
HMG20B-208ENST00000464304 HECW1Q76N89 1606 aa30.17■■■□□ 2.42
HMG20B-208ENST00000464304 ATP10BO94823 1461 aa30.17■■■□□ 2.42
HMG20B-208ENST00000464304 KDM6BO15054 1643 aa30.16■■■□□ 2.42
HMG20B-208ENST00000464304 KDM4FA0A1W2PPD8 638 aa30.16■■■□□ 2.42
HMG20B-208ENST00000464304 PCF11O94913 1555 aaKnown RBP30.15■■■□□ 2.42
HMG20B-208ENST00000464304 LRRIQ1Q96JM4 1722 aa30.15■■■□□ 2.42
HMG20B-208ENST00000464304 WDR7Q9Y4E6 1490 aa30.08■■■□□ 2.41
HMG20B-208ENST00000464304 CDK13Q14004 1512 aaKnown RBP30.06■■■□□ 2.4
HMG20B-208ENST00000464304 CASKIN1Q8WXD9 1431 aa30.05■■■□□ 2.4
HMG20B-208ENST00000464304 EPRSP07814 1512 aaKnown RBP30.04■■■□□ 2.4
HMG20B-208ENST00000464304 ATP1B4Q9UN42 357 aaPredicted RBP30.03■■■□□ 2.4
HMG20B-208ENST00000464304 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.02■■■□□ 2.4
HMG20B-208ENST00000464304 HNRNPUL2Q1KMD3 747 aaKnown RBP30.02■■■□□ 2.4
HMG20B-208ENST00000464304 FYCO1Q9BQS8 1478 aa30.01■■■□□ 2.4
HMG20B-208ENST00000464304 GLI2P10070 1586 aa30.01■■■□□ 2.39
HMG20B-208ENST00000464304 PPRC1Q5VV67 1664 aaKnown RBP29.96■■■□□ 2.39
HMG20B-208ENST00000464304 MAP3K4Q9Y6R4 1608 aa29.93■■■□□ 2.38
HMG20B-208ENST00000464304 CCDC18Q5T9S5 1454 aa29.93■■■□□ 2.38
HMG20B-208ENST00000464304 KCNH8Q96L42 1107 aa29.9■■■□□ 2.38
HMG20B-208ENST00000464304 CFAP43Q8NDM7 1665 aa29.9■■■□□ 2.38
HMG20B-208ENST00000464304 VPS8Q8N3P4 1428 aa29.88■■■□□ 2.37
HMG20B-208ENST00000464304 PLEKHD1A6NEE1 506 aa29.87■■■□□ 2.37
HMG20B-208ENST00000464304 ABCA9Q8IUA7 1624 aa29.85■■■□□ 2.37
HMG20B-208ENST00000464304 ILDR1Q86SU0 546 aaPredicted RBP29.84■■■□□ 2.37
HMG20B-208ENST00000464304 MAGI3Q5TCQ9 1506 aa29.8■■■□□ 2.36
HMG20B-208ENST00000464304 CDK11AQ9UQ88 783 aaPredicted RBP29.78■■■□□ 2.36
HMG20B-208ENST00000464304 KIF14Q15058 1648 aa29.78■■■□□ 2.36
HMG20B-208ENST00000464304 TROQ12816 1431 aaPredicted RBP29.77■■■□□ 2.36
HMG20B-208ENST00000464304 ADGRL1O94910 1474 aa29.76■■■□□ 2.35
HMG20B-208ENST00000464304 TTC37Q6PGP7 1564 aa29.76■■■□□ 2.35
HMG20B-208ENST00000464304 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.76■■■□□ 2.35
HMG20B-208ENST00000464304 COL17A1Q9UMD9 1497 aaPredicted RBP29.75■■■□□ 2.35
HMG20B-208ENST00000464304 CD109Q6YHK3 1445 aa29.74■■■□□ 2.35
HMG20B-208ENST00000464304 TIAM1Q13009 1591 aa29.71■■■□□ 2.35
HMG20B-208ENST00000464304 MYO5CQ9NQX4 1742 aa29.68■■■□□ 2.34
HMG20B-208ENST00000464304 TEX14Q8IWB6 1497 aa29.68■■■□□ 2.34
HMG20B-208ENST00000464304 EHBP1L1Q8N3D4 1523 aa29.63■■■□□ 2.33
HMG20B-208ENST00000464304 MTUS2Q5JR59 1369 aa29.61■■■□□ 2.33
HMG20B-208ENST00000464304 MAP3K1Q13233 1512 aa29.6■■■□□ 2.33
HMG20B-208ENST00000464304 HECW2Q9P2P5 1572 aa29.6■■■□□ 2.33
HMG20B-208ENST00000464304 CDC42BPAQ5VT25 1732 aa29.58■■■□□ 2.33
HMG20B-208ENST00000464304 CDC42BPBQ9Y5S2 1711 aa29.57■■■□□ 2.32
HMG20B-208ENST00000464304 PREX2Q70Z35 1606 aa29.54■■■□□ 2.32
HMG20B-208ENST00000464304 CFAP74Q9C0B2 1584 aa29.54■■■□□ 2.32
HMG20B-208ENST00000464304 SUPT6HQ7KZ85 1726 aaKnown RBP29.54■■■□□ 2.32
HMG20B-208ENST00000464304 LRRC9Q6ZRR7 1453 aa29.52■■■□□ 2.32
HMG20B-208ENST00000464304 PLCH2O75038 1416 aa29.52■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms